RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 OR10J3Q5JRS4 329 aa15.18■□□□□ 0.02
PTCD3-203ENST00000409783 C6orf223Q8N319 242 aa15.18■□□□□ 0.02
PTCD3-203ENST00000409783 NAT8BQ9UHF3 227 aa15.18■□□□□ 0.02
PTCD3-203ENST00000409783 TRAV8-6A0A0B4J262 113 aa15.17■□□□□ 0.02
PTCD3-203ENST00000409783 IGHV3-38A0A0C4DH36 116 aa15.17■□□□□ 0.02
PTCD3-203ENST00000409783 TMEM218A2RU14 115 aa15.17■□□□□ 0.02
PTCD3-203ENST00000409783 LINC00862A6NCI5 91 aa15.17■□□□□ 0.02
PTCD3-203ENST00000409783 PNRC1Q12796 327 aaPredicted RBP15.17■□□□□ 0.02
PTCD3-203ENST00000409783 COMMD7Q86VX2 200 aa15.17■□□□□ 0.02
PTCD3-203ENST00000409783 BORCS7Q96B45 105 aa15.17■□□□□ 0.02
PTCD3-203ENST00000409783 A0A087WWC5 75 aa15.16■□□□□ 0.02
PTCD3-203ENST00000409783 H7C1H1 209 aa15.16■□□□□ 0.02
PTCD3-203ENST00000409783 LINC01556Q5JQF7 62 aa15.16■□□□□ 0.02
PTCD3-203ENST00000409783 RASL11AQ6T310 242 aa15.16■□□□□ 0.02
PTCD3-203ENST00000409783 DNAJC30Q96LL9 226 aa15.16■□□□□ 0.02
PTCD3-203ENST00000409783 LINC00336Q6ZUF6 198 aa15.15■□□□□ 0.02
PTCD3-203ENST00000409783 SMIM15Q7Z3B0 74 aa15.15■□□□□ 0.02
PTCD3-203ENST00000409783 GATD1Q8NB37 220 aa15.15■□□□□ 0.02
PTCD3-203ENST00000409783 TMEM191AQ9H0A3 160 aa15.15■□□□□ 0.02
PTCD3-203ENST00000409783 TRAV26-2A0A0B4J265 109 aa15.14■□□□□ 0.01
PTCD3-203ENST00000409783 BTF3P20290 206 aaKnown RBP15.14■□□□□ 0.01
PTCD3-203ENST00000409783 NIT2Q9NQR4 276 aa15.14■□□□□ 0.01
PTCD3-203ENST00000409783 K7EP13 123 aa15.13■□□□□ 0.01
PTCD3-203ENST00000409783 RIGQ13278 110 aa15.13■□□□□ 0.01
PTCD3-203ENST00000409783 PPP1R2P9O14990 202 aa15.12■□□□□ 0.01
PTCD3-203ENST00000409783 DAZ4Q86SG3 579 aaKnown RBP15.12■□□□□ 0.01
PTCD3-203ENST00000409783 Q8N3U1 123 aa15.12■□□□□ 0.01
PTCD3-203ENST00000409783 RNF185Q96GF1 192 aa15.12■□□□□ 0.01
PTCD3-203ENST00000409783 DAZ3Q9NR90 486 aaKnown RBP15.12■□□□□ 0.01
PTCD3-203ENST00000409783 TNFRSF18Q9Y5U5 241 aa15.12■□□□□ 0.01
PTCD3-203ENST00000409783 TRAV9-2A0A087WT02 112 aa15.11■□□□□ 0.01
PTCD3-203ENST00000409783 TRBV6-8A0A0A6YYG3 113 aa15.11■□□□□ 0.01
PTCD3-203ENST00000409783 NTM-AS1Q6ZSK4 140 aa15.11■□□□□ 0.01
PTCD3-203ENST00000409783 PRSS29PA6NIE9 313 aa15.1■□□□□ 0.01
PTCD3-203ENST00000409783 F8W036 122 aa15.1■□□□□ 0.01
PTCD3-203ENST00000409783 Q6ZRN7 208 aaPredicted RBP15.1■□□□□ 0.01
PTCD3-203ENST00000409783 FRZBQ92765 325 aa15.1■□□□□ 0.01
PTCD3-203ENST00000409783 ANAPC16Q96DE5 110 aa15.1■□□□□ 0.01
PTCD3-203ENST00000409783 SEC11CQ9BY50 192 aa15.1■□□□□ 0.01
PTCD3-203ENST00000409783 HECTD4Q9Y4D8 3996 aa15.09■□□□□ 0.01
PTCD3-203ENST00000409783 A0A1B0GVY2 172 aa15.09■□□□□ 0.01
PTCD3-203ENST00000409783 GAS8-AS1O95177 125 aa15.09■□□□□ 0.01
PTCD3-203ENST00000409783 IGHV3-30P01768 117 aa15.09■□□□□ 0.01
PTCD3-203ENST00000409783 IGHV3-33P01772 117 aa15.09■□□□□ 0.01
PTCD3-203ENST00000409783 MT-ND4LP03901 98 aa15.09■□□□□ 0.01
PTCD3-203ENST00000409783 IGHV3-30-3P0DP02 117 aa15.09■□□□□ 0.01
PTCD3-203ENST00000409783 IGHV3-30-5P0DP03 117 aa15.09■□□□□ 0.01
PTCD3-203ENST00000409783 RAB4AP20338 218 aa15.09■□□□□ 0.01
PTCD3-203ENST00000409783 NIT1Q86X76 327 aa15.09■□□□□ 0.01
PTCD3-203ENST00000409783 RPL39LQ96EH5 51 aaKnown RBP15.09■□□□□ 0.01
PTCD3-203ENST00000409783 PKD1P98161 4303 aa15.08■□□□□ 0.01
PTCD3-203ENST00000409783 AMN1Q8IY45 258 aa15.08■□□□□ 0
PTCD3-203ENST00000409783 C10orf126Q8N4M7 172 aa15.08■□□□□ 0
PTCD3-203ENST00000409783 A0A1B0GXF2 115 aa15.07■□□□□ 0
PTCD3-203ENST00000409783 IBA57-AS1B1ANH7 110 aa15.07■□□□□ 0
PTCD3-203ENST00000409783 TNP2Q05952 138 aa15.07■□□□□ 0
PTCD3-203ENST00000409783 C10orf91Q5T1B1 145 aa15.07■□□□□ 0
PTCD3-203ENST00000409783 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.07■□□□□ 0
PTCD3-203ENST00000409783 DNAH11Q96DT5 4516 aa15.06■□□□□ 0
PTCD3-203ENST00000409783 A0A1B0GW15 77 aa15.06■□□□□ 0
PTCD3-203ENST00000409783 TMEM97Q5BJF2 176 aa15.06■□□□□ 0
PTCD3-203ENST00000409783 CAMPP49913 170 aa15.05■□□□□ -0
PTCD3-203ENST00000409783 MRPL54Q6P161 138 aaKnown RBP15.05■□□□□ -0
PTCD3-203ENST00000409783 BIRC6Q9NR09 4857 aa15.04■□□□□ -0
PTCD3-203ENST00000409783 TRBV6-5A0A0K0K1A5 114 aa15.04■□□□□ -0
PTCD3-203ENST00000409783 IQCJQ1A5X6 159 aa15.04■□□□□ -0
PTCD3-203ENST00000409783 FAM104BQ5XKR9 115 aa15.04■□□□□ -0
PTCD3-203ENST00000409783 MRAP2Q96G30 205 aa15.04■□□□□ -0
PTCD3-203ENST00000409783 RPS10P46783 165 aaKnown RBP15.03■□□□□ -0
PTCD3-203ENST00000409783 HBBP68871 147 aa15.03■□□□□ -0
PTCD3-203ENST00000409783 CARHSP1Q9Y2V2 147 aaKnown RBP15.03■□□□□ -0
PTCD3-203ENST00000409783 NFE4Q86UQ8 179 aa15.02■□□□□ -0
PTCD3-203ENST00000409783 CHCHD7Q9BUK0 85 aa15.02■□□□□ -0
PTCD3-203ENST00000409783 SDHAF1A6NFY7 115 aa15.01□□□□□ -0.01
PTCD3-203ENST00000409783 MRPL51Q4U2R6 128 aaKnown RBP15.01□□□□□ -0.01
PTCD3-203ENST00000409783 ATP5L2Q7Z4Y8 100 aa15.01□□□□□ -0.01
PTCD3-203ENST00000409783 DEFB104AQ8WTQ1 72 aa15.01□□□□□ -0.01
PTCD3-203ENST00000409783 TRBV25-1A0A075B6N4 114 aa15□□□□□ -0.01
PTCD3-203ENST00000409783 IGHV1-24A0A0C4DH33 117 aa15□□□□□ -0.01
PTCD3-203ENST00000409783 SMKR1H3BMG3 65 aa15□□□□□ -0.01
PTCD3-203ENST00000409783 LAGE3Q14657 143 aa15□□□□□ -0.01
PTCD3-203ENST00000409783 CHCHD5Q9BSY4 110 aa15□□□□□ -0.01
PTCD3-203ENST00000409783 NCR2O95944 276 aa14.99□□□□□ -0.01
PTCD3-203ENST00000409783 S100A8P05109 93 aa14.99□□□□□ -0.01
PTCD3-203ENST00000409783 MPV17L2Q567V2 206 aa14.99□□□□□ -0.01
PTCD3-203ENST00000409783 KCNIP4Q6PIL6 250 aa14.99□□□□□ -0.01
PTCD3-203ENST00000409783 NRACQ8N912 160 aa14.99□□□□□ -0.01
PTCD3-203ENST00000409783 CTDSP1Q9GZU7 261 aa14.99□□□□□ -0.01
PTCD3-203ENST00000409783 URGCP-MRPS24S4R325 110 aa14.99□□□□□ -0.01
PTCD3-203ENST00000409783 A0A087WX48 190 aa14.98□□□□□ -0.01
PTCD3-203ENST00000409783 POLR2KP53803 58 aaKnown RBP14.98□□□□□ -0.01
PTCD3-203ENST00000409783 COTL1Q14019 142 aa14.98□□□□□ -0.01
PTCD3-203ENST00000409783 IMMP2LQ96T52 175 aa14.98□□□□□ -0.01
PTCD3-203ENST00000409783 TMEM70Q9BUB7 260 aa14.98□□□□□ -0.01
PTCD3-203ENST00000409783 TMEM262E9PQX1 116 aa14.97□□□□□ -0.01
PTCD3-203ENST00000409783 ATRAIDQ6UW56 229 aa14.97□□□□□ -0.01
PTCD3-203ENST00000409783 Q9HAA7 133 aa14.97□□□□□ -0.01
PTCD3-203ENST00000409783 ST20Q9HBF5 79 aa14.97□□□□□ -0.01
PTCD3-203ENST00000409783 GAGE6Q13070 117 aa14.96□□□□□ -0.01
PTCD3-203ENST00000409783 TMEM243Q9BU79 118 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms