RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 VCYO14598 125 aa8.91□□□□□ -0.98
RBM39-206ENST00000403542 POLR2KP53803 58 aaKnown RBP8.91□□□□□ -0.98
RBM39-206ENST00000403542 SYT8Q8NBV8 401 aa8.91□□□□□ -0.98
RBM39-206ENST00000403542 Q9UF83 564 aa8.91□□□□□ -0.98
RBM39-206ENST00000403542 TRAV2A0A0B4J234 112 aa8.91□□□□□ -0.98
RBM39-206ENST00000403542 A6NDX4 124 aa8.91□□□□□ -0.98
RBM39-206ENST00000403542 KLLNB2CW77 178 aa8.91□□□□□ -0.98
RBM39-206ENST00000403542 HERVK_113P61574 105 aa8.91□□□□□ -0.98
RBM39-206ENST00000403542 ZNF876PQ49A33 203 aa8.9□□□□□ -0.98
RBM39-206ENST00000403542 DLX4Q92988 240 aaPredicted RBP8.9□□□□□ -0.98
RBM39-206ENST00000403542 BEX4Q9NWD9 120 aaPredicted RBP8.9□□□□□ -0.98
RBM39-206ENST00000403542 ID1P41134 155 aa8.9□□□□□ -0.99
RBM39-206ENST00000403542 PRRC2AP48634 2157 aaKnown RBP8.9□□□□□ -0.99
RBM39-206ENST00000403542 NPC2P61916 151 aa8.9□□□□□ -0.99
RBM39-206ENST00000403542 A0A0J9YXV3 536 aa8.89□□□□□ -0.99
RBM39-206ENST00000403542 J3QQQ9 107 aa8.89□□□□□ -0.99
RBM39-206ENST00000403542 TCL1BO95988 128 aa8.89□□□□□ -0.99
RBM39-206ENST00000403542 CFC1BP0CG36 223 aa8.89□□□□□ -0.99
RBM39-206ENST00000403542 CFC1P0CG37 223 aa8.89□□□□□ -0.99
RBM39-206ENST00000403542 LGALS3P17931 250 aaKnown RBP8.89□□□□□ -0.99
RBM39-206ENST00000403542 NDUFA11Q86Y39 141 aa8.89□□□□□ -0.99
RBM39-206ENST00000403542 ZNF469Q96JG9 3925 aaPredicted RBP8.89□□□□□ -0.99
RBM39-206ENST00000403542 DEFB136Q30KP8 78 aa8.89□□□□□ -0.99
RBM39-206ENST00000403542 MTORP42345 2549 aa8.89□□□□□ -0.99
RBM39-206ENST00000403542 MSMBP08118 114 aa8.88□□□□□ -0.99
RBM39-206ENST00000403542 UBE2D1P51668 147 aa8.88□□□□□ -0.99
RBM39-206ENST00000403542 C10orf105Q8TEF2 133 aa8.88□□□□□ -0.99
RBM39-206ENST00000403542 DUX3Q96PT4 197 aa8.88□□□□□ -0.99
RBM39-206ENST00000403542 SPXQ9BT56 116 aa8.88□□□□□ -0.99
RBM39-206ENST00000403542 IGHV3-16A0A0C4DH30 117 aa8.88□□□□□ -0.99
RBM39-206ENST00000403542 FOXI1Q12951 378 aa8.88□□□□□ -0.99
RBM39-206ENST00000403542 DEFB112Q30KQ8 113 aa8.88□□□□□ -0.99
RBM39-206ENST00000403542 CFAP126Q5VTH2 177 aa8.88□□□□□ -0.99
RBM39-206ENST00000403542 A8MZ25 164 aa8.87□□□□□ -0.99
RBM39-206ENST00000403542 PPP1R17O96001 155 aa8.87□□□□□ -0.99
RBM39-206ENST00000403542 IGLV1-40P01703 118 aa8.87□□□□□ -0.99
RBM39-206ENST00000403542 FHL3Q13643 280 aa8.87□□□□□ -0.99
RBM39-206ENST00000403542 TRPT1Q86TN4 253 aaKnown RBP8.87□□□□□ -0.99
RBM39-206ENST00000403542 IGHV4OR15-8A0A075B7B6 117 aa8.87□□□□□ -0.99
RBM39-206ENST00000403542 A0A087WW49 117 aa8.87□□□□□ -0.99
RBM39-206ENST00000403542 A4D1N5 150 aa8.87□□□□□ -0.99
RBM39-206ENST00000403542 M0QY20 66 aa8.87□□□□□ -0.99
RBM39-206ENST00000403542 IGHV3-30P01768 117 aa8.87□□□□□ -0.99
RBM39-206ENST00000403542 IGHV3-30-5P0DP03 117 aa8.87□□□□□ -0.99
RBM39-206ENST00000403542 CRIP2P52943 208 aaPredicted RBP8.87□□□□□ -0.99
RBM39-206ENST00000403542 PRSS2P07478 247 aa8.87□□□□□ -0.99
RBM39-206ENST00000403542 SNRPD3P62318 126 aaKnown RBP8.86□□□□□ -0.99
RBM39-206ENST00000403542 Q1RN00 199 aa8.86□□□□□ -0.99
RBM39-206ENST00000403542 APRG1Q8IVJ8 170 aa8.86□□□□□ -0.99
RBM39-206ENST00000403542 TRAV8-3A0A0A6YYJ7 113 aa8.86□□□□□ -0.99
RBM39-206ENST00000403542 MED14OSP0DP75 135 aa8.86□□□□□ -0.99
RBM39-206ENST00000403542 C1QTNF4Q9BXJ3 329 aa8.86□□□□□ -0.99
RBM39-206ENST00000403542 IGHV1OR15-1A0A075B7D0 117 aa8.85□□□□□ -0.99
RBM39-206ENST00000403542 A0A0J9YX75 114 aa8.85□□□□□ -0.99
RBM39-206ENST00000403542 TRBV27A0A0K0K1C4 114 aa8.85□□□□□ -0.99
RBM39-206ENST00000403542 NXPH4O95158 308 aa8.85□□□□□ -0.99
RBM39-206ENST00000403542 Q5PR19 223 aa8.85□□□□□ -0.99
RBM39-206ENST00000403542 C18orf65Q6ZTR6 163 aa8.85□□□□□ -0.99
RBM39-206ENST00000403542 IGHV3-38A0A0C4DH36 116 aa8.85□□□□□ -0.99
RBM39-206ENST00000403542 MT-ATP8P03928 68 aa8.85□□□□□ -0.99
RBM39-206ENST00000403542 SLC25A29Q8N8R3 303 aa8.85□□□□□ -0.99
RBM39-206ENST00000403542 ELANEP08246 267 aa8.84□□□□□ -0.99
RBM39-206ENST00000403542 RBMY1A1P0DJD3 496 aaKnown RBP8.84□□□□□ -0.99
RBM39-206ENST00000403542 RBMY1CP0DJD4 496 aa8.84□□□□□ -0.99
RBM39-206ENST00000403542 RBMY1FQ15415 496 aaKnown RBP8.84□□□□□ -0.99
RBM39-206ENST00000403542 MUSTN1Q8IVN3 82 aa8.84□□□□□ -0.99
RBM39-206ENST00000403542 AMELXQ99217 191 aa8.84□□□□□ -0.99
RBM39-206ENST00000403542 VCX2Q9H322 139 aa8.84□□□□□ -0.99
RBM39-206ENST00000403542 ACANP16112 2415 aa8.84□□□□□ -0.99
RBM39-206ENST00000403542 EIF4EBP3O60516 100 aaPredicted RBP8.84□□□□□ -0.99
RBM39-206ENST00000403542 PSMB8P28062 276 aa8.84□□□□□ -0.99
RBM39-206ENST00000403542 Q6ZSV7 163 aa8.84□□□□□ -0.99
RBM39-206ENST00000403542 TMEM141Q96I45 108 aa8.84□□□□□ -0.99
RBM39-206ENST00000403542 CARD19Q96LW7 228 aa8.84□□□□□ -0.99
RBM39-206ENST00000403542 ATP6V0BQ99437 205 aa8.84□□□□□ -0.99
RBM39-206ENST00000403542 TIMM17AQ99595 171 aa8.84□□□□□ -0.99
RBM39-206ENST00000403542 SPATA25Q9BR10 227 aa8.84□□□□□ -0.99
RBM39-206ENST00000403542 C9JAW5 83 aa8.83□□□□□ -1
RBM39-206ENST00000403542 LGALS9O00182 355 aa8.83□□□□□ -1
RBM39-206ENST00000403542 KHDC1LQ5JSQ8 128 aa8.83□□□□□ -1
RBM39-206ENST00000403542 PRO1854Q9UHT4 67 aa8.83□□□□□ -1
RBM39-206ENST00000403542 LINC01619G3V211 115 aa8.83□□□□□ -1
RBM39-206ENST00000403542 UBE2D3P61077 147 aa8.83□□□□□ -1
RBM39-206ENST00000403542 UBE2D2P62837 147 aa8.83□□□□□ -1
RBM39-206ENST00000403542 C10orf126Q8N4M7 172 aa8.83□□□□□ -1
RBM39-206ENST00000403542 CD28P10747 220 aa8.83□□□□□ -1
RBM39-206ENST00000403542 ZNF22P17026 224 aaPredicted RBP8.83□□□□□ -1
RBM39-206ENST00000403542 C9orf85Q96MD7 179 aa8.83□□□□□ -1
RBM39-206ENST00000403542 CDIP1Q9H305 208 aa8.83□□□□□ -1
RBM39-206ENST00000403542 H3BUA1 57 aa8.82□□□□□ -1
RBM39-206ENST00000403542 SPINK8P0C7L1 97 aa8.82□□□□□ -1
RBM39-206ENST00000403542 XGP55808 180 aa8.82□□□□□ -1
RBM39-206ENST00000403542 CFHR3Q02985 330 aa8.82□□□□□ -1
RBM39-206ENST00000403542 PAPPA-AS1Q5QFB9 102 aa8.82□□□□□ -1
RBM39-206ENST00000403542 ANKRD29Q8N6D5 301 aa8.82□□□□□ -1
RBM39-206ENST00000403542 POM121L12Q8N7R1 296 aa8.82□□□□□ -1
RBM39-206ENST00000403542 NBEAL2Q6ZNJ1 2754 aa8.82□□□□□ -1
RBM39-206ENST00000403542 SETXQ7Z333 2677 aaKnown RBP8.82□□□□□ -1
RBM39-206ENST00000403542 IGLV4-3A0A075B6K6 122 aa8.82□□□□□ -1
RBM39-206ENST00000403542 HOXD3P31249 432 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms