RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 EDA2RQ9HAV5 297 aa11.55□□□□□ -0.56
CDC42-203ENST00000400259 TMEM160Q9NX00 188 aa11.55□□□□□ -0.56
CDC42-203ENST00000400259 SDHAF1A6NFY7 115 aa11.54□□□□□ -0.56
CDC42-203ENST00000400259 MORN3Q6PF18 240 aaPredicted RBP11.54□□□□□ -0.56
CDC42-203ENST00000400259 ZFP2Q6ZN57 461 aa11.54□□□□□ -0.56
CDC42-203ENST00000400259 LINC01006Q8NI28 216 aa11.54□□□□□ -0.56
CDC42-203ENST00000400259 PTH2Q96A98 100 aa11.54□□□□□ -0.56
CDC42-203ENST00000400259 KIR2DL4Q99706 377 aa11.54□□□□□ -0.56
CDC42-203ENST00000400259 CYSLTR1Q9Y271 337 aa11.54□□□□□ -0.56
CDC42-203ENST00000400259 ZNF56Q15929 161 aa11.53□□□□□ -0.56
CDC42-203ENST00000400259 NEGR1Q7Z3B1 354 aa11.53□□□□□ -0.56
CDC42-203ENST00000400259 TRPT1Q86TN4 253 aaKnown RBP11.53□□□□□ -0.56
CDC42-203ENST00000400259 BAALCQ8WXS3 180 aa11.53□□□□□ -0.56
CDC42-203ENST00000400259 TSSC4Q9Y5U2 329 aaPredicted RBP11.53□□□□□ -0.56
CDC42-203ENST00000400259 SEC11AP67812 179 aa11.53□□□□□ -0.56
CDC42-203ENST00000400259 HSD52Q0P140 79 aa11.53□□□□□ -0.56
CDC42-203ENST00000400259 GTSCR1Q86UQ5 136 aa11.53□□□□□ -0.56
CDC42-203ENST00000400259 HIGD1BQ9P298 99 aa11.53□□□□□ -0.56
CDC42-203ENST00000400259 DEFB104AQ8WTQ1 72 aa11.52□□□□□ -0.56
CDC42-203ENST00000400259 HELZ2Q9BYK8 2649 aaKnown RBP11.52□□□□□ -0.57
CDC42-203ENST00000400259 NACAE9PAV3 2078 aa11.52□□□□□ -0.57
CDC42-203ENST00000400259 TRAV8-6A0A0B4J262 113 aa11.52□□□□□ -0.57
CDC42-203ENST00000400259 CITED2Q99967 270 aaPredicted RBP11.52□□□□□ -0.57
CDC42-203ENST00000400259 A0A1W2PRX2 142 aa11.51□□□□□ -0.57
CDC42-203ENST00000400259 IGIPA6NJ69 53 aa11.51□□□□□ -0.57
CDC42-203ENST00000400259 ODF3L2Q3SX64 289 aa11.51□□□□□ -0.57
CDC42-203ENST00000400259 GTF2H5Q6ZYL4 71 aa11.51□□□□□ -0.57
CDC42-203ENST00000400259 NF1P21359 2839 aa11.51□□□□□ -0.57
CDC42-203ENST00000400259 ZNF415Q09FC8 603 aa11.51□□□□□ -0.57
CDC42-203ENST00000400259 C11orf44Q8N8P7 122 aa11.51□□□□□ -0.57
CDC42-203ENST00000400259 TP53TG1Q9Y2A0 90 aa11.51□□□□□ -0.57
CDC42-203ENST00000400259 ITPR2Q14571 2701 aa11.5□□□□□ -0.57
CDC42-203ENST00000400259 CUBNO60494 3623 aa11.5□□□□□ -0.57
CDC42-203ENST00000400259 M0R2P5 195 aa11.5□□□□□ -0.57
CDC42-203ENST00000400259 HILS1P60008 231 aa11.5□□□□□ -0.57
CDC42-203ENST00000400259 RHOHQ15669 191 aa11.5□□□□□ -0.57
CDC42-203ENST00000400259 UFSP1Q6NVU6 142 aa11.5□□□□□ -0.57
CDC42-203ENST00000400259 TMEM141Q96I45 108 aa11.5□□□□□ -0.57
CDC42-203ENST00000400259 TIMM17AQ99595 171 aa11.5□□□□□ -0.57
CDC42-203ENST00000400259 INSP01308 110 aa11.49□□□□□ -0.57
CDC42-203ENST00000400259 NSUN5P1Q3KNT7 163 aa11.49□□□□□ -0.57
CDC42-203ENST00000400259 ZNF418Q8TF45 676 aaPredicted RBP11.49□□□□□ -0.57
CDC42-203ENST00000400259 GAGE10A6NGK3 116 aa11.49□□□□□ -0.57
CDC42-203ENST00000400259 PRSS29PA6NIE9 313 aa11.49□□□□□ -0.57
CDC42-203ENST00000400259 A8MWV9 139 aa11.49□□□□□ -0.57
CDC42-203ENST00000400259 TSHBP01222 138 aa11.49□□□□□ -0.57
CDC42-203ENST00000400259 NAA38Q9BRA0 125 aaKnown RBP11.49□□□□□ -0.57
CDC42-203ENST00000400259 UNC79Q9P2D8 2635 aa11.48□□□□□ -0.57
CDC42-203ENST00000400259 NDUFA7O95182 113 aa11.48□□□□□ -0.57
CDC42-203ENST00000400259 C11orf72Q8NBR9 251 aa11.48□□□□□ -0.57
CDC42-203ENST00000400259 ACANP16112 2415 aa11.48□□□□□ -0.57
CDC42-203ENST00000400259 SIGMAR1Q99720 223 aa11.47□□□□□ -0.57
CDC42-203ENST00000400259 TRBV25-1A0A075B6N4 114 aa11.47□□□□□ -0.57
CDC42-203ENST00000400259 HTN1P15515 57 aa11.47□□□□□ -0.57
CDC42-203ENST00000400259 MAPKAPK5-AS1Q8N8E1 139 aa11.47□□□□□ -0.57
CDC42-203ENST00000400259 SPXQ9BT56 116 aa11.47□□□□□ -0.57
CDC42-203ENST00000400259 WNK1Q9H4A3 2382 aa11.46□□□□□ -0.57
CDC42-203ENST00000400259 A6NDN8 102 aa11.46□□□□□ -0.57
CDC42-203ENST00000400259 I3L3M4 83 aa11.46□□□□□ -0.57
CDC42-203ENST00000400259 AZU1P20160 251 aa11.46□□□□□ -0.57
CDC42-203ENST00000400259 RPL39P62891 51 aaKnown RBP11.46□□□□□ -0.57
CDC42-203ENST00000400259 PMVKQ15126 192 aa11.46□□□□□ -0.57
CDC42-203ENST00000400259 LINC01587Q99440 93 aa11.46□□□□□ -0.57
CDC42-203ENST00000400259 OR11H12B2RN74 326 aa11.46□□□□□ -0.58
CDC42-203ENST00000400259 BEAN1Q3B7T3 259 aa11.46□□□□□ -0.58
CDC42-203ENST00000400259 PAPPA-AS1Q5QFB9 102 aa11.46□□□□□ -0.58
CDC42-203ENST00000400259 CHAC1Q9BUX1 264 aa11.46□□□□□ -0.58
CDC42-203ENST00000400259 NIPBLQ6KC79 2804 aaeCLIP11.45□□□□□ -0.58
CDC42-203ENST00000400259 STHQ8IWL8 128 aa11.45□□□□□ -0.58
CDC42-203ENST00000400259 ANK3Q12955 4377 aaKnown RBP11.45□□□□□ -0.58
CDC42-203ENST00000400259 IGLV4-69A0A075B6H9 119 aa11.44□□□□□ -0.58
CDC42-203ENST00000400259 CMC4P56277 68 aaPredicted RBP11.44□□□□□ -0.58
CDC42-203ENST00000400259 RAB37Q96AX2 223 aa11.44□□□□□ -0.58
CDC42-203ENST00000400259 ADARB2-AS1A8MUL3 147 aa11.44□□□□□ -0.58
CDC42-203ENST00000400259 E9PLD3 99 aa11.44□□□□□ -0.58
CDC42-203ENST00000400259 PRM2P04554 102 aa11.44□□□□□ -0.58
CDC42-203ENST00000400259 P0DMU3 169 aa11.44□□□□□ -0.58
CDC42-203ENST00000400259 FAM231AP0DMU4 169 aa11.44□□□□□ -0.58
CDC42-203ENST00000400259 FAM231CP0DMU5 169 aa11.44□□□□□ -0.58
CDC42-203ENST00000400259 CRYBA4P53673 196 aa11.44□□□□□ -0.58
CDC42-203ENST00000400259 PROK1P58294 105 aa11.44□□□□□ -0.58
CDC42-203ENST00000400259 RHODO00212 210 aa11.43□□□□□ -0.58
CDC42-203ENST00000400259 FXYD2P54710 66 aa11.43□□□□□ -0.58
CDC42-203ENST00000400259 CFAP126Q5VTH2 177 aa11.43□□□□□ -0.58
CDC42-203ENST00000400259 MTURNQ8N3F0 131 aa11.43□□□□□ -0.58
CDC42-203ENST00000400259 C20orf203Q8NBC4 194 aa11.43□□□□□ -0.58
CDC42-203ENST00000400259 FAM110AQ9BQ89 295 aa11.43□□□□□ -0.58
CDC42-203ENST00000400259 H3BRM9 83 aa11.43□□□□□ -0.58
CDC42-203ENST00000400259 CKS1BP61024 79 aa11.43□□□□□ -0.58
CDC42-203ENST00000400259 OR11H2Q8NH07 326 aa11.43□□□□□ -0.58
CDC42-203ENST00000400259 TRAV26-1A0A087WT03 109 aa11.42□□□□□ -0.58
CDC42-203ENST00000400259 K7EP34 96 aa11.42□□□□□ -0.58
CDC42-203ENST00000400259 XCL2Q9UBD3 114 aa11.42□□□□□ -0.58
CDC42-203ENST00000400259 H3BUT2 72 aa11.42□□□□□ -0.58
CDC42-203ENST00000400259 IGLV1-51P01701 117 aa11.42□□□□□ -0.58
CDC42-203ENST00000400259 TAL2Q16559 108 aa11.42□□□□□ -0.58
CDC42-203ENST00000400259 C1orf158Q8N1D5 194 aa11.42□□□□□ -0.58
CDC42-203ENST00000400259 IL17DQ8TAD2 202 aa11.42□□□□□ -0.58
CDC42-203ENST00000400259 C11orf86A6NJI1 115 aa11.41□□□□□ -0.58
CDC42-203ENST00000400259 GCSHP23434 173 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms