RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 ZNRF2Q8NHG8 242 aa16.96■□□□□ 0.31
RABGGTA-202ENST00000399409 G3V4G9 280 aa16.95■□□□□ 0.3
RABGGTA-202ENST00000399409 SRSF9Q13242 221 aaKnown RBP eCLIP16.95■□□□□ 0.3
RABGGTA-202ENST00000399409 KLHL30-AS1Q8NEE0 82 aa16.95■□□□□ 0.3
RABGGTA-202ENST00000399409 PTH2Q96A98 100 aa16.95■□□□□ 0.3
RABGGTA-202ENST00000399409 Q96MF0 132 aa16.95■□□□□ 0.3
RABGGTA-202ENST00000399409 A8MWV9 139 aa16.94■□□□□ 0.3
RABGGTA-202ENST00000399409 TMEM86BQ8N661 226 aa16.94■□□□□ 0.3
RABGGTA-202ENST00000399409 TMEM61Q8N0U2 210 aa16.93■□□□□ 0.3
RABGGTA-202ENST00000399409 DUX3Q96PT4 197 aa16.93■□□□□ 0.3
RABGGTA-202ENST00000399409 SPANXB1Q9NS25 103 aaPredicted RBP16.93■□□□□ 0.3
RABGGTA-202ENST00000399409 MAP1AP78559 2803 aaPredicted RBP16.93■□□□□ 0.3
RABGGTA-202ENST00000399409 A0A0J9YY99 117 aa16.93■□□□□ 0.3
RABGGTA-202ENST00000399409 RBMY1BA6NDE4 496 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-202ENST00000399409 RBMY1EA6NEQ0 496 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-202ENST00000399409 F8W1H4 67 aa16.93■□□□□ 0.3
RABGGTA-202ENST00000399409 M0R2P5 195 aa16.93■□□□□ 0.3
RABGGTA-202ENST00000399409 RBMY1DP0C7P1 496 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-202ENST00000399409 ZNF415Q09FC8 603 aa16.93■□□□□ 0.3
RABGGTA-202ENST00000399409 DYNLRB2Q8TF09 96 aa16.93■□□□□ 0.3
RABGGTA-202ENST00000399409 LINC00467Q9BRT7 94 aa16.93■□□□□ 0.3
RABGGTA-202ENST00000399409 USP9YO00507 2555 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-202ENST00000399409 UBE2D1P51668 147 aa16.91■□□□□ 0.3
RABGGTA-202ENST00000399409 TEX29Q8N6K0 151 aa16.91■□□□□ 0.3
RABGGTA-202ENST00000399409 MAP6D1Q9H9H5 199 aa16.9■□□□□ 0.3
RABGGTA-202ENST00000399409 J3QQQ9 107 aa16.9■□□□□ 0.3
RABGGTA-202ENST00000399409 HTN1P15515 57 aa16.9■□□□□ 0.3
RABGGTA-202ENST00000399409 LGALS3P17931 250 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-202ENST00000399409 DLX4Q92988 240 aaPredicted RBP16.9■□□□□ 0.3
RABGGTA-202ENST00000399409 RAX2Q96IS3 184 aa16.9■□□□□ 0.3
RABGGTA-202ENST00000399409 PYGO1Q9Y3Y4 419 aa16.9■□□□□ 0.3
RABGGTA-202ENST00000399409 DOPEY2Q9Y3R5 2298 aa16.9■□□□□ 0.3
RABGGTA-202ENST00000399409 LEPROTO15243 131 aa16.89■□□□□ 0.29
RABGGTA-202ENST00000399409 TSPEAR-AS2P59090 65 aa16.89■□□□□ 0.29
RABGGTA-202ENST00000399409 KHDC1LQ5JSQ8 128 aa16.89■□□□□ 0.29
RABGGTA-202ENST00000399409 OPRPNQ99935 248 aaPredicted RBP16.89■□□□□ 0.29
RABGGTA-202ENST00000399409 VCX2Q9H322 139 aa16.89■□□□□ 0.29
RABGGTA-202ENST00000399409 UTP20O75691 2785 aaKnown RBP16.89■□□□□ 0.29
RABGGTA-202ENST00000399409 USP24Q9UPU5 2620 aa16.89■□□□□ 0.29
RABGGTA-202ENST00000399409 IGLV4-3A0A075B6K6 122 aa16.89■□□□□ 0.29
RABGGTA-202ENST00000399409 TMEM223A0PJW6 202 aa16.89■□□□□ 0.29
RABGGTA-202ENST00000399409 SLC25A29Q8N8R3 303 aa16.89■□□□□ 0.29
RABGGTA-202ENST00000399409 CRYBA4P53673 196 aa16.88■□□□□ 0.29
RABGGTA-202ENST00000399409 DEFB114Q30KQ6 69 aa16.88■□□□□ 0.29
RABGGTA-202ENST00000399409 TNFRSF18Q9Y5U5 241 aa16.88■□□□□ 0.29
RABGGTA-202ENST00000399409 FBN2P35556 2912 aa16.88■□□□□ 0.29
RABGGTA-202ENST00000399409 PGPEP1Q9NXJ5 209 aa16.87■□□□□ 0.29
RABGGTA-202ENST00000399409 AMELXQ99217 191 aa16.87■□□□□ 0.29
RABGGTA-202ENST00000399409 CRYBG3Q68DQ2 2970 aa16.87■□□□□ 0.29
RABGGTA-202ENST00000399409 C21orf62-AS1Q17RA5 79 aa16.86■□□□□ 0.29
RABGGTA-202ENST00000399409 KRTAP1-3Q8IUG1 177 aa16.86■□□□□ 0.29
RABGGTA-202ENST00000399409 CLUHP3Q96NS8 147 aa16.86■□□□□ 0.29
RABGGTA-202ENST00000399409 SPXQ9BT56 116 aa16.86■□□□□ 0.29
RABGGTA-202ENST00000399409 MRPL16Q9NX20 251 aaKnown RBP16.86■□□□□ 0.29
RABGGTA-202ENST00000399409 IGHV3-73A0A0B4J1V6 119 aa16.85■□□□□ 0.29
RABGGTA-202ENST00000399409 RHODO00212 210 aa16.85■□□□□ 0.29
RABGGTA-202ENST00000399409 ZNF22P17026 224 aaPredicted RBP16.85■□□□□ 0.29
RABGGTA-202ENST00000399409 RPL24P83731 157 aaKnown RBP16.85■□□□□ 0.29
RABGGTA-202ENST00000399409 ZNF462Q96JM2 2506 aa16.85■□□□□ 0.29
RABGGTA-202ENST00000399409 FAM208BQ5VWN6 2430 aa16.85■□□□□ 0.29
RABGGTA-202ENST00000399409 INSP01308 110 aa16.85■□□□□ 0.29
RABGGTA-202ENST00000399409 H3BMG7 143 aa16.84■□□□□ 0.29
RABGGTA-202ENST00000399409 IGHV3-30P01768 117 aa16.84■□□□□ 0.29
RABGGTA-202ENST00000399409 IGHV3-30-5P0DP03 117 aa16.84■□□□□ 0.29
RABGGTA-202ENST00000399409 LINC01587Q99440 93 aa16.84■□□□□ 0.29
RABGGTA-202ENST00000399409 UBR5O95071 2799 aaPredicted RBP16.83■□□□□ 0.28
RABGGTA-202ENST00000399409 TRAV25A0A0B4J276 109 aa16.83■□□□□ 0.28
RABGGTA-202ENST00000399409 PROK1P58294 105 aa16.83■□□□□ 0.28
RABGGTA-202ENST00000399409 GAGE13Q4V321 117 aa16.83■□□□□ 0.28
RABGGTA-202ENST00000399409 CFAP126Q5VTH2 177 aa16.83■□□□□ 0.28
RABGGTA-202ENST00000399409 Q6ZSV7 163 aa16.82■□□□□ 0.28
RABGGTA-202ENST00000399409 DNAJC30Q96LL9 226 aa16.82■□□□□ 0.28
RABGGTA-202ENST00000399409 SORL1Q92673 2214 aa16.82■□□□□ 0.28
RABGGTA-202ENST00000399409 POLQO75417 2590 aa16.82■□□□□ 0.28
RABGGTA-202ENST00000399409 A0A0J9YXV3 536 aa16.82■□□□□ 0.28
RABGGTA-202ENST00000399409 CD28P10747 220 aa16.82■□□□□ 0.28
RABGGTA-202ENST00000399409 BEAN1Q3B7T3 259 aa16.82■□□□□ 0.28
RABGGTA-202ENST00000399409 C11orf72Q8NBR9 251 aa16.82■□□□□ 0.28
RABGGTA-202ENST00000399409 WFDC2Q14508 124 aa16.81■□□□□ 0.28
RABGGTA-202ENST00000399409 EPG5Q9HCE0 2579 aa16.81■□□□□ 0.28
RABGGTA-202ENST00000399409 TEX48A0A1B0GUV7 120 aa16.81■□□□□ 0.28
RABGGTA-202ENST00000399409 LYRM7Q5U5X0 104 aa16.81■□□□□ 0.28
RABGGTA-202ENST00000399409 NDUFA11Q86Y39 141 aa16.81■□□□□ 0.28
RABGGTA-202ENST00000399409 TSPAN13O95857 204 aa16.8■□□□□ 0.28
RABGGTA-202ENST00000399409 SPANXA1Q9NS26 97 aa16.8■□□□□ 0.28
RABGGTA-202ENST00000399409 ZFYVE26Q68DK2 2539 aa16.8■□□□□ 0.28
RABGGTA-202ENST00000399409 ZANQ9Y493 2812 aa16.79■□□□□ 0.28
RABGGTA-202ENST00000399409 PRO0461Q9UI25 63 aa16.79■□□□□ 0.28
RABGGTA-202ENST00000399409 RS1O15537 224 aa16.79■□□□□ 0.28
RABGGTA-202ENST00000399409 APOMO95445 188 aa16.79■□□□□ 0.28
RABGGTA-202ENST00000399409 IGHV3-53P01767 116 aa16.79■□□□□ 0.28
RABGGTA-202ENST00000399409 PRM2P04554 102 aa16.79■□□□□ 0.28
RABGGTA-202ENST00000399409 MRPS36P82909 103 aaKnown RBP16.79■□□□□ 0.28
RABGGTA-202ENST00000399409 Q6ZSN1 163 aa16.78■□□□□ 0.28
RABGGTA-202ENST00000399409 LRRK2Q5S007 2527 aa16.78■□□□□ 0.28
RABGGTA-202ENST00000399409 FAM104AQ969W3 186 aa16.77■□□□□ 0.28
RABGGTA-202ENST00000399409 DNAJC9-AS1A6NH13 148 aa16.77■□□□□ 0.27
RABGGTA-202ENST00000399409 J3QR89 54 aa16.77■□□□□ 0.27
RABGGTA-202ENST00000399409 CHCHD7Q9BUK0 85 aa16.77■□□□□ 0.27
RABGGTA-202ENST00000399409 NAV2Q8IVL1 2488 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms