RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 RBMY1FQ15415 496 aaKnown RBP12.99□□□□□ -0.33
HLA-DQB1-204ENST00000399084 TRBV25-1A0A075B6N4 114 aa12.98□□□□□ -0.33
HLA-DQB1-204ENST00000399084 OR11H12B2RN74 326 aa12.98□□□□□ -0.33
HLA-DQB1-204ENST00000399084 E9PLD3 99 aa12.98□□□□□ -0.33
HLA-DQB1-204ENST00000399084 OR11H2Q8NH07 326 aa12.98□□□□□ -0.33
HLA-DQB1-204ENST00000399084 CD28P10747 220 aa12.97□□□□□ -0.33
HLA-DQB1-204ENST00000399084 HILS1P60008 231 aa12.97□□□□□ -0.33
HLA-DQB1-204ENST00000399084 BEAN1Q3B7T3 259 aa12.97□□□□□ -0.33
HLA-DQB1-204ENST00000399084 CRYBA4P53673 196 aa12.96□□□□□ -0.33
HLA-DQB1-204ENST00000399084 VAMP3Q15836 100 aa12.96□□□□□ -0.33
HLA-DQB1-204ENST00000399084 ZNF124Q15973 351 aa12.96□□□□□ -0.33
HLA-DQB1-204ENST00000399084 MORN3Q6PF18 240 aaPredicted RBP12.96□□□□□ -0.33
HLA-DQB1-204ENST00000399084 STHQ8IWL8 128 aa12.96□□□□□ -0.33
HLA-DQB1-204ENST00000399084 DNAJC30Q96LL9 226 aa12.96□□□□□ -0.33
HLA-DQB1-204ENST00000399084 LINC01587Q99440 93 aa12.96□□□□□ -0.33
HLA-DQB1-204ENST00000399084 TM2D2Q9BX73 214 aa12.96□□□□□ -0.33
HLA-DQB1-204ENST00000399084 MYO9AB2RTY4 2548 aa12.96□□□□□ -0.33
HLA-DQB1-204ENST00000399084 AGRNO00468 2067 aa12.96□□□□□ -0.34
HLA-DQB1-204ENST00000399084 HERVK_113P61574 105 aa12.96□□□□□ -0.34
HLA-DQB1-204ENST00000399084 UFSP1Q6NVU6 142 aa12.96□□□□□ -0.34
HLA-DQB1-204ENST00000399084 CHAC1Q9BUX1 264 aa12.96□□□□□ -0.34
HLA-DQB1-204ENST00000399084 CST9LQ9H4G1 147 aa12.96□□□□□ -0.34
HLA-DQB1-204ENST00000399084 ODF3L2Q3SX64 289 aa12.95□□□□□ -0.34
HLA-DQB1-204ENST00000399084 CITED2Q99967 270 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQB1-204ENST00000399084 C20orf203Q8NBC4 194 aa12.94□□□□□ -0.34
HLA-DQB1-204ENST00000399084 PYGO1Q9Y3Y4 419 aa12.94□□□□□ -0.34
HLA-DQB1-204ENST00000399084 ITPR3Q14573 2671 aa12.94□□□□□ -0.34
HLA-DQB1-204ENST00000399084 C9orf118A6NHY6 69 aa12.93□□□□□ -0.34
HLA-DQB1-204ENST00000399084 TSHBP01222 138 aa12.93□□□□□ -0.34
HLA-DQB1-204ENST00000399084 NEGR1Q7Z3B1 354 aa12.93□□□□□ -0.34
HLA-DQB1-204ENST00000399084 C11orf72Q8NBR9 251 aa12.93□□□□□ -0.34
HLA-DQB1-204ENST00000399084 TRAV8-6A0A0B4J262 113 aa12.93□□□□□ -0.34
HLA-DQB1-204ENST00000399084 MYMXA0A1B0GTQ4 84 aa12.93□□□□□ -0.34
HLA-DQB1-204ENST00000399084 HIST2H2BCQ6DN03 193 aa12.93□□□□□ -0.34
HLA-DQB1-204ENST00000399084 TNFRSF18Q9Y5U5 241 aa12.93□□□□□ -0.34
HLA-DQB1-204ENST00000399084 CSMD2Q7Z408 3487 aa12.93□□□□□ -0.34
HLA-DQB1-204ENST00000399084 CCL25O15444 150 aa12.92□□□□□ -0.34
HLA-DQB1-204ENST00000399084 C11orf86A6NJI1 115 aa12.91□□□□□ -0.34
HLA-DQB1-204ENST00000399084 SMIM13P0DJ93 91 aa12.91□□□□□ -0.34
HLA-DQB1-204ENST00000399084 HTN1P15515 57 aa12.91□□□□□ -0.34
HLA-DQB1-204ENST00000399084 TCTAP57738 103 aa12.91□□□□□ -0.34
HLA-DQB1-204ENST00000399084 NFE4Q86UQ8 179 aa12.91□□□□□ -0.34
HLA-DQB1-204ENST00000399084 CEND1Q8N111 149 aa12.91□□□□□ -0.34
HLA-DQB1-204ENST00000399084 SORL1Q92673 2214 aa12.91□□□□□ -0.34
HLA-DQB1-204ENST00000399084 RS1O15537 224 aa12.91□□□□□ -0.34
HLA-DQB1-204ENST00000399084 IGHV3-53P01767 116 aa12.91□□□□□ -0.34
HLA-DQB1-204ENST00000399084 CFAP126Q5VTH2 177 aa12.91□□□□□ -0.34
HLA-DQB1-204ENST00000399084 NOTCH2Q04721 2471 aa12.9□□□□□ -0.34
HLA-DQB1-204ENST00000399084 IGLV4-69A0A075B6H9 119 aa12.9□□□□□ -0.34
HLA-DQB1-204ENST00000399084 A0A1W2PRX2 142 aa12.9□□□□□ -0.34
HLA-DQB1-204ENST00000399084 P0DMU3 169 aa12.9□□□□□ -0.34
HLA-DQB1-204ENST00000399084 FAM231AP0DMU4 169 aa12.9□□□□□ -0.34
HLA-DQB1-204ENST00000399084 FAM231CP0DMU5 169 aa12.9□□□□□ -0.34
HLA-DQB1-204ENST00000399084 RPL39P62891 51 aaKnown RBP12.9□□□□□ -0.34
HLA-DQB1-204ENST00000399084 Q6ZVH6 145 aa12.9□□□□□ -0.34
HLA-DQB1-204ENST00000399084 MAPKAPK5-AS1Q8N8E1 139 aa12.9□□□□□ -0.34
HLA-DQB1-204ENST00000399084 GTF2H5Q6ZYL4 71 aa12.89□□□□□ -0.35
HLA-DQB1-204ENST00000399084 OR4C5Q8NGB2 326 aa12.89□□□□□ -0.35
HLA-DQB1-204ENST00000399084 PRADC1Q9BSG0 188 aa12.89□□□□□ -0.35
HLA-DQB1-204ENST00000399084 TEP1Q99973 2627 aaKnown RBP12.89□□□□□ -0.35
HLA-DQB1-204ENST00000399084 IGLV1-51P01701 117 aa12.88□□□□□ -0.35
HLA-DQB1-204ENST00000399084 GCSHP23434 173 aa12.88□□□□□ -0.35
HLA-DQB1-204ENST00000399084 CIDEAO60543 219 aa12.88□□□□□ -0.35
HLA-DQB1-204ENST00000399084 PROK1P58294 105 aa12.88□□□□□ -0.35
HLA-DQB1-204ENST00000399084 AMMECR1LQ6DCA0 310 aa12.88□□□□□ -0.35
HLA-DQB1-204ENST00000399084 C1QTNF4Q9BXJ3 329 aa12.88□□□□□ -0.35
HLA-DQB1-204ENST00000399084 C11orf44Q8N8P7 122 aa12.87□□□□□ -0.35
HLA-DQB1-204ENST00000399084 IL17DQ8TAD2 202 aa12.87□□□□□ -0.35
HLA-DQB1-204ENST00000399084 TTTY13Q9BZ97 58 aa12.87□□□□□ -0.35
HLA-DQB1-204ENST00000399084 VCX2Q9H322 139 aa12.87□□□□□ -0.35
HLA-DQB1-204ENST00000399084 SPANXA1Q9NS26 97 aa12.86□□□□□ -0.35
HLA-DQB1-204ENST00000399084 XCL2Q9UBD3 114 aa12.86□□□□□ -0.35
HLA-DQB1-204ENST00000399084 SAP30O75446 220 aa12.85□□□□□ -0.35
HLA-DQB1-204ENST00000399084 C1orf158Q8N1D5 194 aa12.85□□□□□ -0.35
HLA-DQB1-204ENST00000399084 TMEM263Q8WUH6 116 aaKnown RBP12.85□□□□□ -0.35
HLA-DQB1-204ENST00000399084 HIST1H4GQ99525 98 aa12.85□□□□□ -0.35
HLA-DQB1-204ENST00000399084 NBPF19A0A087WUL8 3843 aa12.85□□□□□ -0.35
HLA-DQB1-204ENST00000399084 PDZD2O15018 2839 aa12.85□□□□□ -0.35
HLA-DQB1-204ENST00000399084 K7EP13 123 aa12.85□□□□□ -0.35
HLA-DQB1-204ENST00000399084 NDUFA11Q86Y39 141 aa12.85□□□□□ -0.35
HLA-DQB1-204ENST00000399084 TRBV10-1A0A0K0K1A3 114 aa12.84□□□□□ -0.35
HLA-DQB1-204ENST00000399084 GAGE10A6NGK3 116 aa12.84□□□□□ -0.35
HLA-DQB1-204ENST00000399084 TRBV7-3A0A075B6L6 115 aa12.83□□□□□ -0.36
HLA-DQB1-204ENST00000399084 ZNF815PA8K554 130 aa12.83□□□□□ -0.36
HLA-DQB1-204ENST00000399084 FXYD2P54710 66 aa12.83□□□□□ -0.36
HLA-DQB1-204ENST00000399084 DAZ2Q13117 558 aaKnown RBP12.83□□□□□ -0.36
HLA-DQB1-204ENST00000399084 RNASE8Q8TDE3 154 aaKnown RBP12.83□□□□□ -0.36
HLA-DQB1-204ENST00000399084 AMELXQ99217 191 aa12.83□□□□□ -0.36
HLA-DQB1-204ENST00000399084 FLNAP21333 2647 aaKnown RBP12.83□□□□□ -0.36
HLA-DQB1-204ENST00000399084 IGLV4-3A0A075B6K6 122 aa12.82□□□□□ -0.36
HLA-DQB1-204ENST00000399084 TMEM238LA0A1B0GVL6 79 aa12.82□□□□□ -0.36
HLA-DQB1-204ENST00000399084 A6NJY4 79 aa12.82□□□□□ -0.36
HLA-DQB1-204ENST00000399084 ADARB2-AS1A8MUL3 147 aa12.82□□□□□ -0.36
HLA-DQB1-204ENST00000399084 TMEM170BQ5T4T1 132 aa12.82□□□□□ -0.36
HLA-DQB1-204ENST00000399084 A0A1B0GWB2 263 aa12.82□□□□□ -0.36
HLA-DQB1-204ENST00000399084 OR5A1Q8NGJ0 315 aa12.82□□□□□ -0.36
HLA-DQB1-204ENST00000399084 TLN2Q9Y4G6 2542 aa12.82□□□□□ -0.36
HLA-DQB1-204ENST00000399084 A0A1W2PPM0 123 aa12.81□□□□□ -0.36
HLA-DQB1-204ENST00000399084 H3BUT2 72 aa12.81□□□□□ -0.36
HLA-DQB1-204ENST00000399084 FABP2P12104 132 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms