RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 CDK12Q9NYV4 1490 aaPredicted RBP1.58□□□□□ -2.16
RPS4XP3-201ENST00000398541 ARAP2Q8WZ64 1704 aa1.58□□□□□ -2.16
RPS4XP3-201ENST00000398541 PRDM15P57071 1507 aaPredicted RBP1.58□□□□□ -2.16
RPS4XP3-201ENST00000398541 TRAV23DV6A0A075B6W5 121 aa1.58□□□□□ -2.16
RPS4XP3-201ENST00000398541 SFT2D2O95562 160 aa1.58□□□□□ -2.16
RPS4XP3-201ENST00000398541 C10orf128Q5T292 105 aa1.58□□□□□ -2.16
RPS4XP3-201ENST00000398541 FAM213BQ8TBF2 198 aa1.58□□□□□ -2.16
RPS4XP3-201ENST00000398541 AMELYQ99218 206 aa1.58□□□□□ -2.16
RPS4XP3-201ENST00000398541 WFDC10AQ9H1F0 79 aa1.58□□□□□ -2.16
RPS4XP3-201ENST00000398541 TNS1Q9HBL0 1735 aaKnown RBP1.57□□□□□ -2.16
RPS4XP3-201ENST00000398541 SPTBP11277 2137 aa1.57□□□□□ -2.16
RPS4XP3-201ENST00000398541 PI4KAP42356 2102 aa1.57□□□□□ -2.16
RPS4XP3-201ENST00000398541 PATJQ8NI35 1801 aa1.57□□□□□ -2.16
RPS4XP3-201ENST00000398541 TRBV7-3A0A075B6L6 115 aa1.57□□□□□ -2.16
RPS4XP3-201ENST00000398541 TEX49A0A1B0GTD5 131 aa1.57□□□□□ -2.16
RPS4XP3-201ENST00000398541 PRB2P02812 416 aaPredicted RBP1.57□□□□□ -2.16
RPS4XP3-201ENST00000398541 NMBP08949 121 aa1.57□□□□□ -2.16
RPS4XP3-201ENST00000398541 FAUP35544 74 aaKnown RBP1.57□□□□□ -2.16
RPS4XP3-201ENST00000398541 TDRG1Q3Y452 100 aa1.57□□□□□ -2.16
RPS4XP3-201ENST00000398541 LINC00322Q6ZN03 302 aaPredicted RBP1.57□□□□□ -2.16
RPS4XP3-201ENST00000398541 DEFB132Q7Z7B7 95 aa1.57□□□□□ -2.16
RPS4XP3-201ENST00000398541 SERP2Q8N6R1 65 aa1.57□□□□□ -2.16
RPS4XP3-201ENST00000398541 MGST2Q99735 147 aa1.57□□□□□ -2.16
RPS4XP3-201ENST00000398541 C20orf78Q9BR46 151 aa1.57□□□□□ -2.16
RPS4XP3-201ENST00000398541 EXPH5Q8NEV8 1989 aa1.57□□□□□ -2.16
RPS4XP3-201ENST00000398541 DOCK11Q5JSL3 2073 aa1.57□□□□□ -2.16
RPS4XP3-201ENST00000398541 TET1Q8NFU7 2136 aa1.57□□□□□ -2.16
RPS4XP3-201ENST00000398541 WNK3Q9BYP7 1800 aa1.56□□□□□ -2.16
RPS4XP3-201ENST00000398541 ABCC3O15438 1527 aa1.56□□□□□ -2.16
RPS4XP3-201ENST00000398541 LOC110117498A0A087WWA1 95 aa1.56□□□□□ -2.16
RPS4XP3-201ENST00000398541 NDUFC1O43677 76 aa1.56□□□□□ -2.16
RPS4XP3-201ENST00000398541 MRPS14O60783 128 aaKnown RBP1.56□□□□□ -2.16
RPS4XP3-201ENST00000398541 DNAL4O96015 105 aa1.56□□□□□ -2.16
RPS4XP3-201ENST00000398541 KRTAP10-1P60331 282 aa1.56□□□□□ -2.16
RPS4XP3-201ENST00000398541 PEA15Q15121 130 aa1.56□□□□□ -2.16
RPS4XP3-201ENST00000398541 SPATA45Q537H7 98 aa1.56□□□□□ -2.16
RPS4XP3-201ENST00000398541 C6orf52Q5T4I8 152 aa1.56□□□□□ -2.16
RPS4XP3-201ENST00000398541 CYP2G1PQ6ZSU1 146 aa1.56□□□□□ -2.16
RPS4XP3-201ENST00000398541 TRGV9Q99603 122 aa1.56□□□□□ -2.16
RPS4XP3-201ENST00000398541 MED9Q9NWA0 146 aa1.56□□□□□ -2.16
RPS4XP3-201ENST00000398541 ADGRB2O60241 1585 aa1.55□□□□□ -2.16
RPS4XP3-201ENST00000398541 COL4A4P53420 1690 aaPredicted RBP1.55□□□□□ -2.16
RPS4XP3-201ENST00000398541 MARF1Q9Y4F3 1742 aaKnown RBP1.55□□□□□ -2.16
RPS4XP3-201ENST00000398541 LOC101927531A0A1B0GV80 90 aa1.55□□□□□ -2.16
RPS4XP3-201ENST00000398541 CLPSL1A2RUU4 121 aa1.55□□□□□ -2.16
RPS4XP3-201ENST00000398541 CRYM-AS1A6NIL9 109 aa1.55□□□□□ -2.16
RPS4XP3-201ENST00000398541 CYB5AP00167 134 aa1.55□□□□□ -2.16
RPS4XP3-201ENST00000398541 ZNF56Q15929 161 aa1.55□□□□□ -2.16
RPS4XP3-201ENST00000398541 LCE1CQ5T751 118 aa1.55□□□□□ -2.16
RPS4XP3-201ENST00000398541 LCE1BQ5T7P3 118 aa1.55□□□□□ -2.16
RPS4XP3-201ENST00000398541 S100A16Q96FQ6 103 aaKnown RBP1.55□□□□□ -2.16
RPS4XP3-201ENST00000398541 FAM167A-AS1Q96KT0 104 aa1.55□□□□□ -2.16
RPS4XP3-201ENST00000398541 S100A13Q99584 98 aa1.55□□□□□ -2.16
RPS4XP3-201ENST00000398541 CACFD1Q9UGQ2 172 aa1.55□□□□□ -2.16
RPS4XP3-201ENST00000398541 SNURFQ9Y675 71 aa1.55□□□□□ -2.16
RPS4XP3-201ENST00000398541 UACAQ9BZF9 1416 aa1.55□□□□□ -2.16
RPS4XP3-201ENST00000398541 KDM5DQ9BY66 1539 aa1.55□□□□□ -2.16
RPS4XP3-201ENST00000398541 CTTNBP2Q8WZ74 1663 aa1.55□□□□□ -2.16
RPS4XP3-201ENST00000398541 SBF2Q86WG5 1849 aa1.54□□□□□ -2.16
RPS4XP3-201ENST00000398541 TRGV2A0A075B6R0 118 aa1.54□□□□□ -2.16
RPS4XP3-201ENST00000398541 FXYD4P59646 89 aa1.54□□□□□ -2.16
RPS4XP3-201ENST00000398541 UBE2D3P61077 147 aa1.54□□□□□ -2.16
RPS4XP3-201ENST00000398541 UBE2D2P62837 147 aa1.54□□□□□ -2.16
RPS4XP3-201ENST00000398541 SSBP1Q04837 148 aaKnown RBP1.54□□□□□ -2.16
RPS4XP3-201ENST00000398541 C20orf197Q8N268 126 aa1.54□□□□□ -2.16
RPS4XP3-201ENST00000398541 ZNF625Q96I27 306 aaPredicted RBP1.54□□□□□ -2.16
RPS4XP3-201ENST00000398541 MANBALQ9NQG1 85 aa1.54□□□□□ -2.16
RPS4XP3-201ENST00000398541 RABAC1Q9UI14 185 aa1.54□□□□□ -2.16
RPS4XP3-201ENST00000398541 RRBP1Q9P2E9 1410 aaKnown RBP1.54□□□□□ -2.16
RPS4XP3-201ENST00000398541 LAMC3Q9Y6N6 1575 aa1.54□□□□□ -2.16
RPS4XP3-201ENST00000398541 SHROOM2Q13796 1616 aa1.54□□□□□ -2.16
RPS4XP3-201ENST00000398541 ZNF142P52746 1687 aaPredicted RBP1.54□□□□□ -2.16
RPS4XP3-201ENST00000398541 TOPAZ1Q8N9V7 1692 aa1.54□□□□□ -2.16
RPS4XP3-201ENST00000398541 NWD2Q9ULI1 1742 aa1.54□□□□□ -2.16
RPS4XP3-201ENST00000398541 UQCRHLA0A096LP55 91 aa1.53□□□□□ -2.16
RPS4XP3-201ENST00000398541 TRAV22A0A0B4J277 110 aa1.53□□□□□ -2.16
RPS4XP3-201ENST00000398541 NBDYA0A0U1RRE5 68 aa1.53□□□□□ -2.16
RPS4XP3-201ENST00000398541 CHKB-CPT1BH3BT56 60 aa1.53□□□□□ -2.16
RPS4XP3-201ENST00000398541 APOC3P02656 99 aa1.53□□□□□ -2.16
RPS4XP3-201ENST00000398541 UQCRHP07919 91 aa1.53□□□□□ -2.16
RPS4XP3-201ENST00000398541 TRAPPC2P0DI81 140 aa1.53□□□□□ -2.16
RPS4XP3-201ENST00000398541 TRAPPC2BP0DI82 140 aa1.53□□□□□ -2.16
RPS4XP3-201ENST00000398541 IL9P15248 144 aa1.53□□□□□ -2.16
RPS4XP3-201ENST00000398541 CCL3L1P16619 93 aa1.53□□□□□ -2.16
RPS4XP3-201ENST00000398541 COL5A3P25940 1745 aaPredicted RBP1.53□□□□□ -2.16
RPS4XP3-201ENST00000398541 ELOF1P60002 83 aaKnown RBP1.53□□□□□ -2.16
RPS4XP3-201ENST00000398541 RPL37AP61513 92 aaKnown RBP1.53□□□□□ -2.16
RPS4XP3-201ENST00000398541 KRTAP13-4Q3LI77 160 aa1.53□□□□□ -2.16
RPS4XP3-201ENST00000398541 Q5VV11 94 aa1.53□□□□□ -2.16
RPS4XP3-201ENST00000398541 PXDNQ92626 1479 aa1.53□□□□□ -2.16
RPS4XP3-201ENST00000398541 PLIN4Q96Q06 1357 aa1.53□□□□□ -2.16
RPS4XP3-201ENST00000398541 CYSTM1Q9H1C7 97 aa1.53□□□□□ -2.16
RPS4XP3-201ENST00000398541 PRO1854Q9UHT4 67 aa1.53□□□□□ -2.16
RPS4XP3-201ENST00000398541 TANC1Q9C0D5 1861 aa1.52□□□□□ -2.17
RPS4XP3-201ENST00000398541 IGKV3D-7A0A0C4DH55 119 aa1.52□□□□□ -2.17
RPS4XP3-201ENST00000398541 IGKV3OR2-268A0A0C4DH90 116 aa1.52□□□□□ -2.17
RPS4XP3-201ENST00000398541 IGLC7A0M8Q6 106 aa1.52□□□□□ -2.17
RPS4XP3-201ENST00000398541 SYS1-DBNDD2H3BUS1 97 aa1.52□□□□□ -2.17
RPS4XP3-201ENST00000398541 GDF5OSQ5U4N7 250 aa1.52□□□□□ -2.17
RPS4XP3-201ENST00000398541 Q8N6K4 173 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms