RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 NRXN3Q9Y4C0 1643 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 DUOX1Q9NRD9 1551 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 NFAT5O94916 1531 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 ANKRD17O75179 2603 aaKnown RBP0.48□□□□□ -2.33
CD47-203ENST00000398258 CD163L1Q9NR16 1453 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 CHD8Q9HCK8 2581 aa0.48□□□□□ -2.33
CD47-203ENST00000398258 MUC4Q99102 2169 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 ANKRD50Q9ULJ7 1429 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 CEP350Q5VT06 3117 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 ITSN1Q15811 1721 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 TIAM2Q8IVF5 1701 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 ZNF831Q5JPB2 1677 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 NHSQ6T4R5 1651 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 UNC79Q9P2D8 2635 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 PIK3C2BO00750 1634 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 IQGAP3Q86VI3 1631 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 FAM236AA0A1B0GUQ0 79 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 FAM236BA0A1B0GV22 79 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 HIGD1CA8MV81 97 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 LOC730098B7Z3J9 87 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 M0R2Z0 102 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 PIN1P1O15428 100 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 CCKP06307 115 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 UQCRHP07919 91 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 ADCYAP1P18509 176 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 SPINT3P49223 89 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 CAV3P56539 151 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 NCS1P62166 190 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 PLGLB1Q02325 96 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 Q6ZS92 163 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 TSTD1Q8NFU3 115 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 MAGOHBQ96A72 148 aaKnown RBP0.47□□□□□ -2.33
CD47-203ENST00000398258 DMAC1Q96GE9 116 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 MRPL35Q9NZE8 188 aaKnown RBP0.47□□□□□ -2.33
CD47-203ENST00000398258 KNTC1P50748 2209 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 ANKRD31Q8N7Z5 1873 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 SRCAPQ6ZRS2 3230 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 C4AP0C0L4 1744 aa0.47□□□□□ -2.33
CD47-203ENST00000398258 EML5Q05BV3 1969 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 C5P01031 1676 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 CTTNBP2Q8WZ74 1663 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 SPAG17Q6Q759 2223 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 ABCA2Q9BZC7 2435 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 UQCRHLA0A096LP55 91 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 NBDYA0A0U1RRE5 68 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 K7ERU9 68 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 FXYD1O00168 92 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 LY6G6CO95867 125 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 RBP4P02753 201 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 IGLC6P0CF74 106 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 MPC1LP0DKB6 136 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 LINC00694P0DN24 101 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 EVI2AP22794 236 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 FXYD3Q14802 87 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 SPINK9Q5DT21 86 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 GLYATL3Q5SZD4 288 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 C6orf52Q5T4I8 152 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 MMGT1Q8N4V1 131 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 C5orf56Q8N8D9 126 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 DEFB124Q8NES8 71 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 ATP6V0E2Q8NHE4 81 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 NOP16Q9Y3C1 178 aaKnown RBP0.46□□□□□ -2.34
CD47-203ENST00000398258 RBBP6Q7Z6E9 1792 aaKnown RBP0.46□□□□□ -2.34
CD47-203ENST00000398258 PIEZO1Q92508 2521 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 LRRC37A2A6NM11 1700 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 CEP152O94986 1710 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 QSER1Q2KHR3 1735 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 DDX60LQ5H9U9 1706 aaKnown RBP0.46□□□□□ -2.34
CD47-203ENST00000398258 NALCNQ8IZF0 1738 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 QRICH2Q9H0J4 1663 aa0.46□□□□□ -2.34
CD47-203ENST00000398258 FAM208AQ9UK61 1670 aaKnown RBP0.46□□□□□ -2.34
CD47-203ENST00000398258 PLIN4Q96Q06 1357 aa0.45□□□□□ -2.34
CD47-203ENST00000398258 CITO14578 2027 aa0.45□□□□□ -2.34
CD47-203ENST00000398258 CHD3Q12873 2000 aaKnown RBP0.45□□□□□ -2.34
CD47-203ENST00000398258 C4BP0C0L5 1744 aa0.45□□□□□ -2.34
CD47-203ENST00000398258 J3QR89 54 aa0.45□□□□□ -2.34
CD47-203ENST00000398258 SLC25A6P12236 298 aa0.45□□□□□ -2.34
CD47-203ENST00000398258 COX4I1P13073 169 aa0.45□□□□□ -2.34
CD47-203ENST00000398258 SMCO1Q147U7 214 aa0.45□□□□□ -2.34
CD47-203ENST00000398258 SMIM21Q3B7S5 101 aa0.45□□□□□ -2.34
CD47-203ENST00000398258 ATP11AUNQ6ZP68 121 aa0.45□□□□□ -2.34
CD47-203ENST00000398258 C10orf95Q9H7T3 257 aa0.45□□□□□ -2.34
CD47-203ENST00000398258 LINC00846Q9NV44 126 aa0.45□□□□□ -2.34
CD47-203ENST00000398258 TAS2R8Q9NYW2 309 aa0.45□□□□□ -2.34
CD47-203ENST00000398258 COPZ2Q9P299 210 aa0.45□□□□□ -2.34
CD47-203ENST00000398258 COL4A6Q14031 1691 aa0.45□□□□□ -2.34
CD47-203ENST00000398258 GCC2Q8IWJ2 1684 aa0.45□□□□□ -2.34
CD47-203ENST00000398258 NUP210Q8TEM1 1887 aaPredicted RBP0.45□□□□□ -2.34
CD47-203ENST00000398258 AKAP12Q02952 1782 aa0.45□□□□□ -2.34
CD47-203ENST00000398258 BCORQ6W2J9 1755 aa0.45□□□□□ -2.34
CD47-203ENST00000398258 ROCK2O75116 1388 aaKnown RBP0.45□□□□□ -2.34
CD47-203ENST00000398258 KTN1Q86UP2 1357 aaKnown RBP0.45□□□□□ -2.34
CD47-203ENST00000398258 MYO9AB2RTY4 2548 aa0.44□□□□□ -2.34
CD47-203ENST00000398258 PDE4DIPQ5VU43 2346 aa0.44□□□□□ -2.34
CD47-203ENST00000398258 MON2Q7Z3U7 1717 aa0.44□□□□□ -2.34
CD47-203ENST00000398258 CRYBG1Q9Y4K1 1723 aa0.44□□□□□ -2.34
CD47-203ENST00000398258 CCDC171Q6TFL3 1326 aa0.44□□□□□ -2.34
CD47-203ENST00000398258 ASH1LQ9NR48 2969 aaKnown RBP0.44□□□□□ -2.34
CD47-203ENST00000398258 VIRMAQ69YN4 1812 aaKnown RBP0.44□□□□□ -2.34
CD47-203ENST00000398258 TRBV20-1A0A075B6N2 111 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms