RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 NUP35Q8NFH5 326 aa14.42□□□□□ -0.1
TSPAN4-206ENST00000397408 NAT8BQ9UHF3 227 aa14.42□□□□□ -0.1
TSPAN4-206ENST00000397408 A0A087WWC5 75 aa14.41□□□□□ -0.1
TSPAN4-206ENST00000397408 PNRC1Q12796 327 aaPredicted RBP14.41□□□□□ -0.1
TSPAN4-206ENST00000397408 COMMD7Q86VX2 200 aa14.41□□□□□ -0.1
TSPAN4-206ENST00000397408 LINC00336Q6ZUF6 198 aa14.41□□□□□ -0.1
TSPAN4-206ENST00000397408 SMIM27A0A1W2PRY6 76 aa14.4□□□□□ -0.1
TSPAN4-206ENST00000397408 RASL11AQ6T310 242 aa14.4□□□□□ -0.1
TSPAN4-206ENST00000397408 TNFRSF18Q9Y5U5 241 aa14.4□□□□□ -0.1
TSPAN4-206ENST00000397408 TRAV9-2A0A087WT02 112 aa14.39□□□□□ -0.11
TSPAN4-206ENST00000397408 RIGQ13278 110 aa14.39□□□□□ -0.11
TSPAN4-206ENST00000397408 LINC01556Q5JQF7 62 aa14.39□□□□□ -0.11
TSPAN4-206ENST00000397408 DNAJC30Q96LL9 226 aa14.39□□□□□ -0.11
TSPAN4-206ENST00000397408 TRAV26-2A0A0B4J265 109 aa14.38□□□□□ -0.11
TSPAN4-206ENST00000397408 TMEM218A2RU14 115 aa14.38□□□□□ -0.11
TSPAN4-206ENST00000397408 ADCYAP1P18509 176 aa14.38□□□□□ -0.11
TSPAN4-206ENST00000397408 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.38□□□□□ -0.11
TSPAN4-206ENST00000397408 EPPK1P58107 5090 aaKnown RBP14.38□□□□□ -0.11
TSPAN4-206ENST00000397408 PRSS29PA6NIE9 313 aa14.37□□□□□ -0.11
TSPAN4-206ENST00000397408 DAZ4Q86SG3 579 aaKnown RBP14.37□□□□□ -0.11
TSPAN4-206ENST00000397408 GATD1Q8NB37 220 aa14.37□□□□□ -0.11
TSPAN4-206ENST00000397408 DAZ3Q9NR90 486 aaKnown RBP14.37□□□□□ -0.11
TSPAN4-206ENST00000397408 K7EP13 123 aa14.36□□□□□ -0.11
TSPAN4-206ENST00000397408 PPP1R2P9O14990 202 aa14.36□□□□□ -0.11
TSPAN4-206ENST00000397408 IGHV3-30P01768 117 aa14.36□□□□□ -0.11
TSPAN4-206ENST00000397408 IGHV3-33P01772 117 aa14.36□□□□□ -0.11
TSPAN4-206ENST00000397408 IGHV3-30-3P0DP02 117 aa14.36□□□□□ -0.11
TSPAN4-206ENST00000397408 IGHV3-30-5P0DP03 117 aa14.36□□□□□ -0.11
TSPAN4-206ENST00000397408 TMEM191AQ9H0A3 160 aa14.36□□□□□ -0.11
TSPAN4-206ENST00000397408 NIT2Q9NQR4 276 aa14.36□□□□□ -0.11
TSPAN4-206ENST00000397408 LINC00862A6NCI5 91 aa14.35□□□□□ -0.11
TSPAN4-206ENST00000397408 F8W036 122 aa14.35□□□□□ -0.11
TSPAN4-206ENST00000397408 BTF3P20290 206 aaKnown RBP14.35□□□□□ -0.11
TSPAN4-206ENST00000397408 C10orf126Q8N4M7 172 aa14.35□□□□□ -0.11
TSPAN4-206ENST00000397408 DNAH17Q9UFH2 4485 aa14.35□□□□□ -0.11
TSPAN4-206ENST00000397408 MT-ND4LP03901 98 aa14.34□□□□□ -0.11
TSPAN4-206ENST00000397408 Q8N3U1 123 aa14.34□□□□□ -0.11
TSPAN4-206ENST00000397408 FAT2Q9NYQ8 4349 aa14.34□□□□□ -0.11
TSPAN4-206ENST00000397408 TRBV6-8A0A0A6YYG3 113 aa14.33□□□□□ -0.11
TSPAN4-206ENST00000397408 AMN1Q8IY45 258 aa14.32□□□□□ -0.12
TSPAN4-206ENST00000397408 ANAPC16Q96DE5 110 aa14.32□□□□□ -0.12
TSPAN4-206ENST00000397408 RPL39LQ96EH5 51 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-206ENST00000397408 TMEM97Q5BJF2 176 aa14.32□□□□□ -0.12
TSPAN4-206ENST00000397408 NIT1Q86X76 327 aa14.32□□□□□ -0.12
TSPAN4-206ENST00000397408 FRZBQ92765 325 aa14.32□□□□□ -0.12
TSPAN4-206ENST00000397408 RNF185Q96GF1 192 aa14.32□□□□□ -0.12
TSPAN4-206ENST00000397408 CAMPP49913 170 aa14.31□□□□□ -0.12
TSPAN4-206ENST00000397408 TNP2Q05952 138 aa14.31□□□□□ -0.12
TSPAN4-206ENST00000397408 MRPL54Q6P161 138 aaKnown RBP14.31□□□□□ -0.12
TSPAN4-206ENST00000397408 NTM-AS1Q6ZSK4 140 aa14.31□□□□□ -0.12
TSPAN4-206ENST00000397408 SEC11CQ9BY50 192 aa14.31□□□□□ -0.12
TSPAN4-206ENST00000397408 URGCP-MRPS24S4R325 110 aa14.31□□□□□ -0.12
TSPAN4-206ENST00000397408 A0A1B0GW15 77 aa14.3□□□□□ -0.12
TSPAN4-206ENST00000397408 RAB4AP20338 218 aa14.3□□□□□ -0.12
TSPAN4-206ENST00000397408 HECTD4Q9Y4D8 3996 aa14.29□□□□□ -0.12
TSPAN4-206ENST00000397408 KCNIP4Q6PIL6 250 aa14.29□□□□□ -0.12
TSPAN4-206ENST00000397408 Q6ZRN7 208 aaPredicted RBP14.29□□□□□ -0.12
TSPAN4-206ENST00000397408 NFE4Q86UQ8 179 aa14.29□□□□□ -0.12
TSPAN4-206ENST00000397408 CHCHD5Q9BSY4 110 aa14.29□□□□□ -0.12
TSPAN4-206ENST00000397408 IBA57-AS1B1ANH7 110 aa14.28□□□□□ -0.12
TSPAN4-206ENST00000397408 GAS8-AS1O95177 125 aa14.28□□□□□ -0.12
TSPAN4-206ENST00000397408 HBBP68871 147 aa14.28□□□□□ -0.12
TSPAN4-206ENST00000397408 MRAP2Q96G30 205 aa14.28□□□□□ -0.12
TSPAN4-206ENST00000397408 TRBV25-1A0A075B6N4 114 aa14.27□□□□□ -0.12
TSPAN4-206ENST00000397408 A0A087WX48 190 aa14.27□□□□□ -0.12
TSPAN4-206ENST00000397408 A0A1B0GXF2 115 aa14.27□□□□□ -0.12
TSPAN4-206ENST00000397408 S100A8P05109 93 aa14.27□□□□□ -0.12
TSPAN4-206ENST00000397408 DEFB104AQ8WTQ1 72 aa14.27□□□□□ -0.12
TSPAN4-206ENST00000397408 IGHV1-24A0A0C4DH33 117 aa14.26□□□□□ -0.13
TSPAN4-206ENST00000397408 A0A1B0GVY2 172 aa14.26□□□□□ -0.13
TSPAN4-206ENST00000397408 TMEM262E9PQX1 116 aa14.26□□□□□ -0.13
TSPAN4-206ENST00000397408 NCR2O95944 276 aa14.26□□□□□ -0.13
TSPAN4-206ENST00000397408 IQCJQ1A5X6 159 aa14.26□□□□□ -0.13
TSPAN4-206ENST00000397408 CHCHD7Q9BUK0 85 aa14.26□□□□□ -0.13
TSPAN4-206ENST00000397408 Q9HAA7 133 aa14.26□□□□□ -0.13
TSPAN4-206ENST00000397408 SMKR1H3BMG3 65 aa14.25□□□□□ -0.13
TSPAN4-206ENST00000397408 COTL1Q14019 142 aa14.25□□□□□ -0.13
TSPAN4-206ENST00000397408 LAGE3Q14657 143 aa14.25□□□□□ -0.13
TSPAN4-206ENST00000397408 FAM104BQ5XKR9 115 aa14.25□□□□□ -0.13
TSPAN4-206ENST00000397408 TRBV6-5A0A0K0K1A5 114 aa14.24□□□□□ -0.13
TSPAN4-206ENST00000397408 SDHAF1A6NFY7 115 aa14.24□□□□□ -0.13
TSPAN4-206ENST00000397408 RPS10P46783 165 aaKnown RBP14.24□□□□□ -0.13
TSPAN4-206ENST00000397408 ATP5L2Q7Z4Y8 100 aa14.24□□□□□ -0.13
TSPAN4-206ENST00000397408 PKIAP61925 76 aa14.24□□□□□ -0.13
TSPAN4-206ENST00000397408 MRPL51Q4U2R6 128 aaKnown RBP14.24□□□□□ -0.13
TSPAN4-206ENST00000397408 MPV17L2Q567V2 206 aa14.24□□□□□ -0.13
TSPAN4-206ENST00000397408 GAGE6Q13070 117 aa14.23□□□□□ -0.13
TSPAN4-206ENST00000397408 C10orf91Q5T1B1 145 aa14.23□□□□□ -0.13
TSPAN4-206ENST00000397408 TMEM243Q9BU79 118 aa14.23□□□□□ -0.13
TSPAN4-206ENST00000397408 ST20Q9HBF5 79 aa14.23□□□□□ -0.13
TSPAN4-206ENST00000397408 KLK12Q9UKR0 248 aa14.23□□□□□ -0.13
TSPAN4-206ENST00000397408 CARHSP1Q9Y2V2 147 aaKnown RBP14.23□□□□□ -0.13
TSPAN4-206ENST00000397408 BIRC6Q9NR09 4857 aa14.22□□□□□ -0.13
TSPAN4-206ENST00000397408 AMTP48728 403 aa14.22□□□□□ -0.13
TSPAN4-206ENST00000397408 CTDSP1Q9GZU7 261 aa14.22□□□□□ -0.13
TSPAN4-206ENST00000397408 ELOBQ15370 118 aa14.21□□□□□ -0.13
TSPAN4-206ENST00000397408 TMEM70Q9BUB7 260 aa14.21□□□□□ -0.13
TSPAN4-206ENST00000397408 ATRAIDQ6UW56 229 aa14.2□□□□□ -0.14
TSPAN4-206ENST00000397408 NRACQ8N912 160 aa14.2□□□□□ -0.14
TSPAN4-206ENST00000397408 Q8N976 141 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms