RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 IGHV1OR15-1A0A075B7D0 117 aa17.57■□□□□ 0.4
PABPN1-202ENST00000397276 SCGB1A1P11684 91 aa17.57■□□□□ 0.4
PABPN1-202ENST00000397276 DUSP14O95147 198 aaKnown RBP17.57■□□□□ 0.4
PABPN1-202ENST00000397276 DEFB131AP59861 70 aa17.57■□□□□ 0.4
PABPN1-202ENST00000397276 ZFP2Q6ZN57 461 aa17.57■□□□□ 0.4
PABPN1-202ENST00000397276 PRM2P04554 102 aa17.57■□□□□ 0.4
PABPN1-202ENST00000397276 NEXN-AS1Q8NBZ9 246 aa17.57■□□□□ 0.4
PABPN1-202ENST00000397276 BAALCQ8WXS3 180 aa17.57■□□□□ 0.4
PABPN1-202ENST00000397276 PRADC1Q9BSG0 188 aa17.57■□□□□ 0.4
PABPN1-202ENST00000397276 LINC01549A6NIU2 74 aa17.56■□□□□ 0.4
PABPN1-202ENST00000397276 APOMO95445 188 aa17.56■□□□□ 0.4
PABPN1-202ENST00000397276 EMP1P54849 157 aa17.56■□□□□ 0.4
PABPN1-202ENST00000397276 ZNF56Q15929 161 aa17.56■□□□□ 0.4
PABPN1-202ENST00000397276 PTH2Q96A98 100 aa17.56■□□□□ 0.4
PABPN1-202ENST00000397276 MRPL16Q9NX20 251 aaKnown RBP17.56■□□□□ 0.4
PABPN1-202ENST00000397276 PPP1R17O96001 155 aa17.56■□□□□ 0.4
PABPN1-202ENST00000397276 KRTAP1-3Q8IUG1 177 aa17.56■□□□□ 0.4
PABPN1-202ENST00000397276 ODF3Q96PU9 254 aa17.56■□□□□ 0.4
PABPN1-202ENST00000397276 POM121L12Q8N7R1 296 aa17.55■□□□□ 0.4
PABPN1-202ENST00000397276 C11orf44Q8N8P7 122 aa17.55■□□□□ 0.4
PABPN1-202ENST00000397276 WFDC11Q8NEX6 87 aa17.55■□□□□ 0.4
PABPN1-202ENST00000397276 C9orf85Q96MD7 179 aa17.55■□□□□ 0.4
PABPN1-202ENST00000397276 ZNF256Q9Y2P7 627 aaPredicted RBP17.55■□□□□ 0.4
PABPN1-202ENST00000397276 RPL39P62891 51 aaKnown RBP17.55■□□□□ 0.4
PABPN1-202ENST00000397276 SCGB2A2Q13296 93 aa17.55■□□□□ 0.4
PABPN1-202ENST00000397276 NFE4Q86UQ8 179 aa17.55■□□□□ 0.4
PABPN1-202ENST00000397276 RNF152Q8N8N0 203 aa17.55■□□□□ 0.4
PABPN1-202ENST00000397276 TRAV12-1A0A0B4J245 112 aa17.54■□□□□ 0.4
PABPN1-202ENST00000397276 SDHAF1A6NFY7 115 aa17.54■□□□□ 0.4
PABPN1-202ENST00000397276 LRRC75A-AS1Q8N1F1 130 aa17.54■□□□□ 0.4
PABPN1-202ENST00000397276 TP53TG1Q9Y2A0 90 aa17.54■□□□□ 0.4
PABPN1-202ENST00000397276 AKAP9Q99996 3911 aa17.54■□□□□ 0.4
PABPN1-202ENST00000397276 ITPR3Q14573 2671 aa17.54■□□□□ 0.4
PABPN1-202ENST00000397276 NF1P21359 2839 aa17.54■□□□□ 0.4
PABPN1-202ENST00000397276 LOC107984156A0A0G2JMH3 177 aa17.53■□□□□ 0.4
PABPN1-202ENST00000397276 ZNF815PA8K554 130 aa17.53■□□□□ 0.4
PABPN1-202ENST00000397276 RBMY1A1P0DJD3 496 aaKnown RBP17.53■□□□□ 0.4
PABPN1-202ENST00000397276 RBMY1CP0DJD4 496 aa17.53■□□□□ 0.4
PABPN1-202ENST00000397276 RBMY1FQ15415 496 aaKnown RBP17.53■□□□□ 0.4
PABPN1-202ENST00000397276 ARL17AQ8IVW1 177 aa17.53■□□□□ 0.4
PABPN1-202ENST00000397276 LINC01619G3V211 115 aa17.53■□□□□ 0.4
PABPN1-202ENST00000397276 ZNF876PQ49A33 203 aa17.53■□□□□ 0.4
PABPN1-202ENST00000397276 POLR2KP53803 58 aaKnown RBP17.52■□□□□ 0.4
PABPN1-202ENST00000397276 SCGB1D4Q6XE38 83 aa17.52■□□□□ 0.4
PABPN1-202ENST00000397276 SYT8Q8NBV8 401 aa17.52■□□□□ 0.4
PABPN1-202ENST00000397276 ZNF418Q8TF45 676 aaPredicted RBP17.52■□□□□ 0.4
PABPN1-202ENST00000397276 A0A1B0GV72 72 aa17.52■□□□□ 0.4
PABPN1-202ENST00000397276 PSMB2P49721 201 aa17.52■□□□□ 0.4
PABPN1-202ENST00000397276 CKS1BP61024 79 aa17.52■□□□□ 0.4
PABPN1-202ENST00000397276 FOXI1Q12951 378 aa17.52■□□□□ 0.4
PABPN1-202ENST00000397276 FHL3Q13643 280 aa17.52■□□□□ 0.4
PABPN1-202ENST00000397276 TMEM61Q8N0U2 210 aa17.51■□□□□ 0.39
PABPN1-202ENST00000397276 DLX4Q92988 240 aaPredicted RBP17.51■□□□□ 0.39
PABPN1-202ENST00000397276 KIR2DL4Q99706 377 aa17.51■□□□□ 0.39
PABPN1-202ENST00000397276 CRYGDP07320 174 aa17.51■□□□□ 0.39
PABPN1-202ENST00000397276 SRSF9Q13242 221 aaKnown RBP eCLIP17.51■□□□□ 0.398e-30■□□□□ 8.3
PABPN1-202ENST00000397276 CFAP126Q5VTH2 177 aa17.51■□□□□ 0.39
PABPN1-202ENST00000397276 VCYO14598 125 aa17.5■□□□□ 0.39
PABPN1-202ENST00000397276 IGHV3-73A0A0B4J1V6 119 aa17.5■□□□□ 0.39
PABPN1-202ENST00000397276 TSPAN13O95857 204 aa17.49■□□□□ 0.39
PABPN1-202ENST00000397276 CDIP1Q9H305 208 aa17.49■□□□□ 0.39
PABPN1-202ENST00000397276 CHD6Q8TD26 2715 aa17.49■□□□□ 0.39
PABPN1-202ENST00000397276 TSHBP01222 138 aa17.49■□□□□ 0.39
PABPN1-202ENST00000397276 Q8N2B8 174 aa17.49■□□□□ 0.39
PABPN1-202ENST00000397276 TENM4Q6N022 2769 aa17.48■□□□□ 0.39
PABPN1-202ENST00000397276 M0QY20 66 aa17.47■□□□□ 0.39
PABPN1-202ENST00000397276 A0A1W2PRX2 142 aa17.47■□□□□ 0.39
PABPN1-202ENST00000397276 C1QTNF4Q9BXJ3 329 aa17.47■□□□□ 0.39
PABPN1-202ENST00000397276 DYNLRB2Q8TF09 96 aa17.46■□□□□ 0.39
PABPN1-202ENST00000397276 FLNAP21333 2647 aaKnown RBP17.46■□□□□ 0.39
PABPN1-202ENST00000397276 RBMY1BA6NDE4 496 aaKnown RBP17.46■□□□□ 0.39
PABPN1-202ENST00000397276 RBMY1EA6NEQ0 496 aaKnown RBP17.46■□□□□ 0.39
PABPN1-202ENST00000397276 RBMY1DP0C7P1 496 aaKnown RBP17.46■□□□□ 0.39
PABPN1-202ENST00000397276 C4orf3Q8WVX3 66 aa17.46■□□□□ 0.39
PABPN1-202ENST00000397276 PEMTQ9UBM1 199 aa17.46■□□□□ 0.39
PABPN1-202ENST00000397276 SETD2Q9BYW2 2564 aaPredicted RBP17.46■□□□□ 0.38
PABPN1-202ENST00000397276 H3BMM0 161 aa17.45■□□□□ 0.38
PABPN1-202ENST00000397276 MT-ATP8P03928 68 aa17.45■□□□□ 0.38
PABPN1-202ENST00000397276 Q6ZSV7 163 aa17.45■□□□□ 0.38
PABPN1-202ENST00000397276 WNK1Q9H4A3 2382 aa17.45■□□□□ 0.38
PABPN1-202ENST00000397276 UBE2D1P51668 147 aa17.45■□□□□ 0.38
PABPN1-202ENST00000397276 IGIPA6NJ69 53 aa17.44■□□□□ 0.38
PABPN1-202ENST00000397276 C11orf86A6NJI1 115 aa17.44■□□□□ 0.38
PABPN1-202ENST00000397276 TRAV26-1A0A087WT03 109 aa17.44■□□□□ 0.38
PABPN1-202ENST00000397276 TRGV11A0A075B6L2 103 aa17.43■□□□□ 0.38
PABPN1-202ENST00000397276 TRBV27A0A0K0K1C4 114 aa17.43■□□□□ 0.38
PABPN1-202ENST00000397276 PROK1P58294 105 aa17.43■□□□□ 0.38
PABPN1-202ENST00000397276 CARD19Q96LW7 228 aa17.43■□□□□ 0.38
PABPN1-202ENST00000397276 OPRPNQ99935 248 aaPredicted RBP17.43■□□□□ 0.38
PABPN1-202ENST00000397276 RPL32P62910 135 aaKnown RBP17.42■□□□□ 0.38
PABPN1-202ENST00000397276 P0DMU3 169 aa17.42■□□□□ 0.38
PABPN1-202ENST00000397276 FAM231AP0DMU4 169 aa17.42■□□□□ 0.38
PABPN1-202ENST00000397276 FAM231CP0DMU5 169 aa17.42■□□□□ 0.38
PABPN1-202ENST00000397276 DNAJC9-AS1A6NH13 148 aa17.41■□□□□ 0.38
PABPN1-202ENST00000397276 SPINK8P0C7L1 97 aa17.41■□□□□ 0.38
PABPN1-202ENST00000397276 XGP55808 180 aa17.41■□□□□ 0.38
PABPN1-202ENST00000397276 ACANP16112 2415 aa17.41■□□□□ 0.38
PABPN1-202ENST00000397276 TSPEAR-AS2P59090 65 aa17.41■□□□□ 0.38
PABPN1-202ENST00000397276 MAP6D1Q9H9H5 199 aa17.4■□□□□ 0.38
PABPN1-202ENST00000397276 IGLV4-69A0A075B6H9 119 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms