RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 P0DMU3 169 aa7.23□□□□□ -1.25
NUP98-205ENST00000397007 FAM231AP0DMU4 169 aa7.23□□□□□ -1.25
NUP98-205ENST00000397007 FAM231CP0DMU5 169 aa7.23□□□□□ -1.25
NUP98-205ENST00000397007 SVBPQ8N300 66 aa7.23□□□□□ -1.25
NUP98-205ENST00000397007 MUC21A0A0G2JKD1 596 aa7.23□□□□□ -1.25
NUP98-205ENST00000397007 MUC21A0A140T8X8 626 aa7.23□□□□□ -1.25
NUP98-205ENST00000397007 TRGC1P0CF51 173 aa7.23□□□□□ -1.25
NUP98-205ENST00000397007 FAM104AQ969W3 186 aa7.23□□□□□ -1.25
NUP98-205ENST00000397007 MRAP2Q96G30 205 aa7.23□□□□□ -1.25
NUP98-205ENST00000397007 SPANXN1Q5VSR9 72 aa7.22□□□□□ -1.25
NUP98-205ENST00000397007 F5H768 121 aa7.22□□□□□ -1.25
NUP98-205ENST00000397007 HBBP68871 147 aa7.22□□□□□ -1.25
NUP98-205ENST00000397007 SH2D6Q7Z4S9 175 aa7.22□□□□□ -1.25
NUP98-205ENST00000397007 TRBV27A0A0K0K1C4 114 aa7.22□□□□□ -1.25
NUP98-205ENST00000397007 SNAPINO95295 136 aa7.22□□□□□ -1.25
NUP98-205ENST00000397007 DNAH10OSP0CZ25 163 aa7.22□□□□□ -1.25
NUP98-205ENST00000397007 BTF3P20290 206 aaKnown RBP7.22□□□□□ -1.25
NUP98-205ENST00000397007 MRPL51Q4U2R6 128 aaKnown RBP7.22□□□□□ -1.25
NUP98-205ENST00000397007 KRTAP1-5Q9BYS1 174 aa7.22□□□□□ -1.25
NUP98-205ENST00000397007 ICOSQ9Y6W8 199 aa7.22□□□□□ -1.25
NUP98-205ENST00000397007 TRBV7-3A0A075B6L6 115 aa7.21□□□□□ -1.25
NUP98-205ENST00000397007 PAX4O43316 350 aa7.21□□□□□ -1.25
NUP98-205ENST00000397007 RPS10P46783 165 aaKnown RBP7.21□□□□□ -1.25
NUP98-205ENST00000397007 IGLL5B9A064 214 aa7.21□□□□□ -1.26
NUP98-205ENST00000397007 GNB1LQ9BYB4 327 aa7.21□□□□□ -1.26
NUP98-205ENST00000397007 GYPEP15421 78 aa7.21□□□□□ -1.26
NUP98-205ENST00000397007 RIGQ13278 110 aa7.21□□□□□ -1.26
NUP98-205ENST00000397007 TWIST1Q15672 202 aa7.21□□□□□ -1.26
NUP98-205ENST00000397007 Q6ZRN7 208 aaPredicted RBP7.21□□□□□ -1.26
NUP98-205ENST00000397007 BTF3L4Q96K17 158 aa7.21□□□□□ -1.26
NUP98-205ENST00000397007 AMN1Q8IY45 258 aa7.2□□□□□ -1.26
NUP98-205ENST00000397007 MRPL23Q16540 153 aaKnown RBP7.2□□□□□ -1.26
NUP98-205ENST00000397007 ESDP10768 282 aa7.2□□□□□ -1.26
NUP98-205ENST00000397007 NIT2Q9NQR4 276 aa7.2□□□□□ -1.26
NUP98-205ENST00000397007 IGHV3-73A0A0B4J1V6 119 aa7.19□□□□□ -1.26
NUP98-205ENST00000397007 TRGV4A0A0C4DH28 118 aa7.19□□□□□ -1.26
NUP98-205ENST00000397007 IQCJQ1A5X6 159 aa7.19□□□□□ -1.26
NUP98-205ENST00000397007 RPL39LQ96EH5 51 aaKnown RBP7.19□□□□□ -1.26
NUP98-205ENST00000397007 TRAV26-2A0A0B4J265 109 aa7.19□□□□□ -1.26
NUP98-205ENST00000397007 A0A0J9YY99 117 aa7.19□□□□□ -1.26
NUP98-205ENST00000397007 COLCA2A8K830 154 aa7.19□□□□□ -1.26
NUP98-205ENST00000397007 LELP1Q5T871 98 aa7.19□□□□□ -1.26
NUP98-205ENST00000397007 APOBP04114 4563 aaKnown RBP7.18□□□□□ -1.26
NUP98-205ENST00000397007 TSHBP01222 138 aa7.18□□□□□ -1.26
NUP98-205ENST00000397007 DAZ4Q86SG3 579 aaKnown RBP7.18□□□□□ -1.26
NUP98-205ENST00000397007 CHCHD7Q9BUK0 85 aa7.18□□□□□ -1.26
NUP98-205ENST00000397007 DAZ3Q9NR90 486 aaKnown RBP7.18□□□□□ -1.26
NUP98-205ENST00000397007 NEGR1Q7Z3B1 354 aa7.17□□□□□ -1.26
NUP98-205ENST00000397007 PRADC1Q9BSG0 188 aa7.17□□□□□ -1.26
NUP98-205ENST00000397007 LAMTOR2Q9Y2Q5 125 aa7.17□□□□□ -1.26
NUP98-205ENST00000397007 K7EP13 123 aa7.17□□□□□ -1.26
NUP98-205ENST00000397007 APOC3P02656 99 aa7.17□□□□□ -1.26
NUP98-205ENST00000397007 C20orf78Q9BR46 151 aa7.17□□□□□ -1.26
NUP98-205ENST00000397007 LINC01556Q5JQF7 62 aa7.17□□□□□ -1.26
NUP98-205ENST00000397007 KRTAP26-1Q6PEX3 210 aa7.17□□□□□ -1.26
NUP98-205ENST00000397007 URB1-AS1Q96HZ7 61 aa7.17□□□□□ -1.26
NUP98-205ENST00000397007 TGIF2-C20orf24A0A0A6YYL0 155 aa7.16□□□□□ -1.26
NUP98-205ENST00000397007 NCR2O95944 276 aa7.16□□□□□ -1.26
NUP98-205ENST00000397007 LRP1BQ9NZR2 4599 aa7.16□□□□□ -1.26
NUP98-205ENST00000397007 TMEM70Q9BUB7 260 aa7.16□□□□□ -1.26
NUP98-205ENST00000397007 TRBV6-8A0A0A6YYG3 113 aa7.16□□□□□ -1.26
NUP98-205ENST00000397007 ATP6V0E2Q8NHE4 81 aa7.16□□□□□ -1.26
NUP98-205ENST00000397007 FAM74A4Q5TZK3 123 aa7.15□□□□□ -1.26
NUP98-205ENST00000397007 PPBPP02775 128 aa7.15□□□□□ -1.26
NUP98-205ENST00000397007 COX19Q49B96 90 aa7.15□□□□□ -1.26
NUP98-205ENST00000397007 MRPL54Q6P161 138 aaKnown RBP7.15□□□□□ -1.26
NUP98-205ENST00000397007 PRR34Q9NV39 138 aa7.15□□□□□ -1.26
NUP98-205ENST00000397007 H7C1H1 209 aa7.15□□□□□ -1.27
NUP98-205ENST00000397007 SRIP30626 198 aa7.15□□□□□ -1.27
NUP98-205ENST00000397007 RPS10P5Q9NQ39 176 aa7.15□□□□□ -1.27
NUP98-205ENST00000397007 NPYP01303 97 aa7.14□□□□□ -1.27
NUP98-205ENST00000397007 S100A8P05109 93 aa7.14□□□□□ -1.27
NUP98-205ENST00000397007 ZNF56Q15929 161 aa7.14□□□□□ -1.27
NUP98-205ENST00000397007 WFDC10BQ8IUB3 73 aa7.14□□□□□ -1.27
NUP98-205ENST00000397007 ALKBH7Q9BT30 221 aaPredicted RBP7.14□□□□□ -1.27
NUP98-205ENST00000397007 TPPP3Q9BW30 176 aa7.14□□□□□ -1.27
NUP98-205ENST00000397007 A0A1B0GVY2 172 aa7.14□□□□□ -1.27
NUP98-205ENST00000397007 HTN3P15516 51 aa7.14□□□□□ -1.27
NUP98-205ENST00000397007 KCNIP4Q6PIL6 250 aa7.14□□□□□ -1.27
NUP98-205ENST00000397007 CBLN2Q8IUK8 224 aa7.14□□□□□ -1.27
NUP98-205ENST00000397007 A0A1B0GUV1 79 aa7.14□□□□□ -1.27
NUP98-205ENST00000397007 H7C423 109 aa7.14□□□□□ -1.27
NUP98-205ENST00000397007 NIT1Q86X76 327 aa7.14□□□□□ -1.27
NUP98-205ENST00000397007 PKHD1L1Q86WI1 4243 aa7.13□□□□□ -1.27
NUP98-205ENST00000397007 D6R8Y8 96 aa7.13□□□□□ -1.27
NUP98-205ENST00000397007 HLA-DQA1P01909 254 aa7.13□□□□□ -1.27
NUP98-205ENST00000397007 MRPL52Q86TS9 123 aaKnown RBP7.13□□□□□ -1.27
NUP98-205ENST00000397007 GAGE12JA6NER3 117 aa7.13□□□□□ -1.27
NUP98-205ENST00000397007 SMKR1H3BMG3 65 aa7.13□□□□□ -1.27
NUP98-205ENST00000397007 TNFRSF6BO95407 300 aa7.13□□□□□ -1.27
NUP98-205ENST00000397007 MT-ND6P03923 174 aa7.13□□□□□ -1.27
NUP98-205ENST00000397007 RPL36AP83881 106 aaKnown RBP7.13□□□□□ -1.27
NUP98-205ENST00000397007 GAGE1Q13065 139 aa7.13□□□□□ -1.27
NUP98-205ENST00000397007 GAGE4Q13068 117 aa7.13□□□□□ -1.27
NUP98-205ENST00000397007 GAGE5Q13069 117 aa7.13□□□□□ -1.27
NUP98-205ENST00000397007 GAGE13Q4V321 117 aa7.13□□□□□ -1.27
NUP98-205ENST00000397007 RPL36ALQ969Q0 106 aaKnown RBP7.13□□□□□ -1.27
NUP98-205ENST00000397007 TMEM97Q5BJF2 176 aa7.13□□□□□ -1.27
NUP98-205ENST00000397007 SUMO2P61956 95 aaKnown RBP7.12□□□□□ -1.27
NUP98-205ENST00000397007 Q8N3U1 123 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms