RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 DAZ1Q9NQZ3 744 aaKnown RBP10.29□□□□□ -0.76
NUP98-204ENST00000397004 TRBV7-9A0A0J9YWB2 115 aa10.28□□□□□ -0.76
NUP98-204ENST00000397004 TMEM238LA0A1B0GVL6 79 aa10.28□□□□□ -0.76
NUP98-204ENST00000397004 TMEM223A0PJW6 202 aa10.28□□□□□ -0.76
NUP98-204ENST00000397004 A6NJY4 79 aa10.28□□□□□ -0.76
NUP98-204ENST00000397004 CKS1BP61024 79 aa10.28□□□□□ -0.76
NUP98-204ENST00000397004 TEN1Q86WV5 123 aa10.28□□□□□ -0.76
NUP98-204ENST00000397004 ANKRD29Q8N6D5 301 aa10.28□□□□□ -0.76
NUP98-204ENST00000397004 TRBV6-5A0A0K0K1A5 114 aa10.27□□□□□ -0.76
NUP98-204ENST00000397004 ZNF688P0C7X2 276 aa10.27□□□□□ -0.76
NUP98-204ENST00000397004 RBMY1A1P0DJD3 496 aaKnown RBP10.27□□□□□ -0.77
NUP98-204ENST00000397004 RBMY1CP0DJD4 496 aa10.27□□□□□ -0.77
NUP98-204ENST00000397004 PROK1P58294 105 aa10.27□□□□□ -0.77
NUP98-204ENST00000397004 RBMY1FQ15415 496 aaKnown RBP10.27□□□□□ -0.77
NUP98-204ENST00000397004 USMG5Q96IX5 58 aa10.27□□□□□ -0.77
NUP98-204ENST00000397004 NIPBLQ6KC79 2804 aaeCLIP10.27□□□□□ -0.77
NUP98-204ENST00000397004 TMEM263Q8WUH6 116 aaKnown RBP10.27□□□□□ -0.77
NUP98-204ENST00000397004 TMEM141Q96I45 108 aa10.27□□□□□ -0.77
NUP98-204ENST00000397004 ADARB2-AS1A8MUL3 147 aa10.27□□□□□ -0.77
NUP98-204ENST00000397004 PPP1R17O96001 155 aa10.27□□□□□ -0.77
NUP98-204ENST00000397004 ZNF22P17026 224 aaPredicted RBP10.27□□□□□ -0.77
NUP98-204ENST00000397004 GATA3P23771 443 aa10.27□□□□□ -0.77
NUP98-204ENST00000397004 TCTEX1D4Q5JR98 221 aa10.27□□□□□ -0.77
NUP98-204ENST00000397004 A0A0J9YXV3 536 aa10.26□□□□□ -0.77
NUP98-204ENST00000397004 SPINK8P0C7L1 97 aa10.26□□□□□ -0.77
NUP98-204ENST00000397004 CRYBA4P53673 196 aa10.26□□□□□ -0.77
NUP98-204ENST00000397004 CEMP1Q6PRD7 247 aaPredicted RBP10.26□□□□□ -0.77
NUP98-204ENST00000397004 IGHV3-33P01772 117 aa10.26□□□□□ -0.77
NUP98-204ENST00000397004 GNLYP22749 145 aa10.26□□□□□ -0.77
NUP98-204ENST00000397004 PRO1854Q9UHT4 67 aa10.26□□□□□ -0.77
NUP98-204ENST00000397004 PKD1L2Q7Z442 2459 aa10.26□□□□□ -0.77
NUP98-204ENST00000397004 TRAV26-1A0A087WT03 109 aa10.26□□□□□ -0.77
NUP98-204ENST00000397004 MUSTN1Q8IVN3 82 aa10.25□□□□□ -0.77
NUP98-204ENST00000397004 USP9XQ93008 2570 aaPredicted RBP10.25□□□□□ -0.77
NUP98-204ENST00000397004 LITAFQ99732 161 aa10.25□□□□□ -0.77
NUP98-204ENST00000397004 NACAE9PAV3 2078 aa10.25□□□□□ -0.77
NUP98-204ENST00000397004 CREBBPQ92793 2442 aa10.25□□□□□ -0.77
NUP98-204ENST00000397004 SPINK13Q1W4C9 94 aa10.25□□□□□ -0.77
NUP98-204ENST00000397004 Q6ZSV7 163 aa10.25□□□□□ -0.77
NUP98-204ENST00000397004 CENPEQ02224 2701 aa10.24□□□□□ -0.77
NUP98-204ENST00000397004 A8MZ25 164 aa10.24□□□□□ -0.77
NUP98-204ENST00000397004 IGLV4-3A0A075B6K6 122 aa10.24□□□□□ -0.77
NUP98-204ENST00000397004 NSUN5P1Q3KNT7 163 aa10.24□□□□□ -0.77
NUP98-204ENST00000397004 PPDPFLQ8WWR9 84 aa10.24□□□□□ -0.77
NUP98-204ENST00000397004 USP9YO00507 2555 aaPredicted RBP10.24□□□□□ -0.77
NUP98-204ENST00000397004 A0A0J9YX75 114 aa10.24□□□□□ -0.77
NUP98-204ENST00000397004 RHODO00212 210 aa10.24□□□□□ -0.77
NUP98-204ENST00000397004 ZNF56Q15929 161 aa10.24□□□□□ -0.77
NUP98-204ENST00000397004 C20orf203Q8NBC4 194 aa10.24□□□□□ -0.77
NUP98-204ENST00000397004 A0A1B0GV72 72 aa10.23□□□□□ -0.77
NUP98-204ENST00000397004 H7C2G1 150 aa10.23□□□□□ -0.77
NUP98-204ENST00000397004 RNASE13Q5GAN3 156 aaKnown RBP10.23□□□□□ -0.77
NUP98-204ENST00000397004 ADAMTSL4-AS1Q5T5F5 129 aa10.23□□□□□ -0.77
NUP98-204ENST00000397004 HERVK_113P61574 105 aa10.23□□□□□ -0.77
NUP98-204ENST00000397004 PAPPA-AS1Q5QFB9 102 aa10.23□□□□□ -0.77
NUP98-204ENST00000397004 POLQO75417 2590 aa10.23□□□□□ -0.77
NUP98-204ENST00000397004 TRAV2A0A0B4J234 112 aa10.23□□□□□ -0.77
NUP98-204ENST00000397004 H3BUA1 57 aa10.23□□□□□ -0.77
NUP98-204ENST00000397004 Q5PR19 223 aa10.23□□□□□ -0.77
NUP98-204ENST00000397004 IGHV4-30-2A0A087WSY4 118 aa10.22□□□□□ -0.77
NUP98-204ENST00000397004 TRAV8-3A0A0A6YYJ7 113 aa10.22□□□□□ -0.77
NUP98-204ENST00000397004 PSMB8P28062 276 aa10.22□□□□□ -0.77
NUP98-204ENST00000397004 IGHV3-73A0A0B4J1V6 119 aa10.22□□□□□ -0.77
NUP98-204ENST00000397004 GEMIN7Q9H840 131 aaKnown RBP10.22□□□□□ -0.77
NUP98-204ENST00000397004 PRRC2AP48634 2157 aaKnown RBP10.22□□□□□ -0.77
NUP98-204ENST00000397004 LEPROTO15243 131 aa10.22□□□□□ -0.77
NUP98-204ENST00000397004 Q6ZSN1 163 aa10.21□□□□□ -0.77
NUP98-204ENST00000397004 DUX5Q96PT3 197 aa10.21□□□□□ -0.77
NUP98-204ENST00000397004 IGSF10Q6WRI0 2623 aa10.21□□□□□ -0.78
NUP98-204ENST00000397004 LGALS3P17931 250 aaKnown RBP10.21□□□□□ -0.78
NUP98-204ENST00000397004 C9JAW5 83 aa10.21□□□□□ -0.78
NUP98-204ENST00000397004 TRBV20-1A0A075B6N2 111 aa10.2□□□□□ -0.78
NUP98-204ENST00000397004 A0A0J9YXY3 114 aa10.2□□□□□ -0.78
NUP98-204ENST00000397004 A8MWV9 139 aa10.2□□□□□ -0.78
NUP98-204ENST00000397004 K7EMT4 169 aa10.2□□□□□ -0.78
NUP98-204ENST00000397004 M0R2P5 195 aa10.2□□□□□ -0.78
NUP98-204ENST00000397004 CRLF1O75462 422 aa10.2□□□□□ -0.78
NUP98-204ENST00000397004 SLC25A20O43772 301 aa10.2□□□□□ -0.78
NUP98-204ENST00000397004 K7EQG2 157 aa10.2□□□□□ -0.78
NUP98-204ENST00000397004 C10orf105Q8TEF2 133 aa10.2□□□□□ -0.78
NUP98-204ENST00000397004 SPXQ9BT56 116 aa10.19□□□□□ -0.78
NUP98-204ENST00000397004 SCGB1C2P0DMR2 95 aa10.19□□□□□ -0.78
NUP98-204ENST00000397004 IGHV3-30-3P0DP02 117 aa10.19□□□□□ -0.78
NUP98-204ENST00000397004 RNF183Q96D59 192 aa10.19□□□□□ -0.78
NUP98-204ENST00000397004 IGHV1OR15-1A0A075B7D0 117 aa10.18□□□□□ -0.78
NUP98-204ENST00000397004 IGHV4-59P01825 116 aa10.18□□□□□ -0.78
NUP98-204ENST00000397004 TRIAP1O43715 76 aa10.18□□□□□ -0.78
NUP98-204ENST00000397004 NHLRC4P0CG21 123 aaPredicted RBP10.18□□□□□ -0.78
NUP98-204ENST00000397004 RHOHQ15669 191 aa10.18□□□□□ -0.78
NUP98-204ENST00000397004 VCX2Q9H322 139 aa10.18□□□□□ -0.78
NUP98-204ENST00000397004 CITED1Q99966 193 aa10.17□□□□□ -0.78
NUP98-204ENST00000397004 A0A0B4J2C4 111 aa10.17□□□□□ -0.78
NUP98-204ENST00000397004 TEX49A0A1B0GTD5 131 aa10.17□□□□□ -0.78
NUP98-204ENST00000397004 I3L3M4 83 aa10.17□□□□□ -0.78
NUP98-204ENST00000397004 KNCNA6PVL3 124 aa10.16□□□□□ -0.78
NUP98-204ENST00000397004 ID1P41134 155 aa10.16□□□□□ -0.78
NUP98-204ENST00000397004 NRGNQ92686 78 aa10.16□□□□□ -0.78
NUP98-204ENST00000397004 SYNJ2BPP57105 145 aa10.16□□□□□ -0.78
NUP98-204ENST00000397004 HIST2H2BDQ6DRA6 164 aa10.16□□□□□ -0.78
NUP98-204ENST00000397004 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms