RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 DOPEY2Q9Y3R5 2298 aa13.57□□□□□ -0.24
HERPUD2-202ENST00000396081 MAP1AP78559 2803 aaPredicted RBP13.57□□□□□ -0.24
HERPUD2-202ENST00000396081 A0A0B4J2C4 111 aa13.56□□□□□ -0.24
HERPUD2-202ENST00000396081 TRBV27A0A0K0K1C4 114 aa13.56□□□□□ -0.24
HERPUD2-202ENST00000396081 FAM223BA6NKX1 122 aa13.56□□□□□ -0.24
HERPUD2-202ENST00000396081 NDUFA4O00483 81 aa13.56□□□□□ -0.24
HERPUD2-202ENST00000396081 TRIAP1O43715 76 aa13.56□□□□□ -0.24
HERPUD2-202ENST00000396081 FAM223AQ8IWN6 122 aa13.56□□□□□ -0.24
HERPUD2-202ENST00000396081 MDFICQ9P1T7 246 aa13.56□□□□□ -0.24
HERPUD2-202ENST00000396081 SPG11Q96JI7 2443 aa13.56□□□□□ -0.24
HERPUD2-202ENST00000396081 H3BMM0 161 aa13.55□□□□□ -0.24
HERPUD2-202ENST00000396081 EDN2P20800 178 aa13.55□□□□□ -0.24
HERPUD2-202ENST00000396081 RPL32P62910 135 aaKnown RBP13.55□□□□□ -0.24
HERPUD2-202ENST00000396081 UBE2WQ96B02 151 aa13.55□□□□□ -0.24
HERPUD2-202ENST00000396081 P0DMU3 169 aa13.55□□□□□ -0.24
HERPUD2-202ENST00000396081 FAM231AP0DMU4 169 aa13.55□□□□□ -0.24
HERPUD2-202ENST00000396081 FAM231CP0DMU5 169 aa13.55□□□□□ -0.24
HERPUD2-202ENST00000396081 C11orf71Q6IPW1 123 aa13.55□□□□□ -0.24
HERPUD2-202ENST00000396081 BRD3OSQ6XYD6 125 aa13.55□□□□□ -0.24
HERPUD2-202ENST00000396081 FAM19A4Q96LR4 140 aa13.55□□□□□ -0.24
HERPUD2-202ENST00000396081 NXPH4O95158 308 aa13.55□□□□□ -0.24
HERPUD2-202ENST00000396081 RNASE13Q5GAN3 156 aaKnown RBP13.55□□□□□ -0.24
HERPUD2-202ENST00000396081 CSPG4Q6UVK1 2322 aa13.55□□□□□ -0.24
HERPUD2-202ENST00000396081 A0A0J9YXY3 114 aa13.54□□□□□ -0.24
HERPUD2-202ENST00000396081 KLK9Q2XQG4 91 aa13.54□□□□□ -0.24
HERPUD2-202ENST00000396081 POM121L12Q8N7R1 296 aa13.54□□□□□ -0.24
HERPUD2-202ENST00000396081 KLK9Q9UKQ9 250 aa13.54□□□□□ -0.24
HERPUD2-202ENST00000396081 MOB4Q9Y3A3 225 aa13.54□□□□□ -0.24
HERPUD2-202ENST00000396081 IGF2RP11717 2491 aa13.54□□□□□ -0.24
HERPUD2-202ENST00000396081 TRAV8-3A0A0A6YYJ7 113 aa13.54□□□□□ -0.24
HERPUD2-202ENST00000396081 Q6ZSV7 163 aa13.54□□□□□ -0.24
HERPUD2-202ENST00000396081 CELSR1Q9NYQ6 3014 aa13.54□□□□□ -0.24
HERPUD2-202ENST00000396081 M0R2P5 195 aa13.53□□□□□ -0.24
HERPUD2-202ENST00000396081 ODF3Q96PU9 254 aa13.53□□□□□ -0.24
HERPUD2-202ENST00000396081 TRBV10-2A0A0K0K1G8 114 aa13.53□□□□□ -0.24
HERPUD2-202ENST00000396081 HERV-K104P63124 156 aa13.53□□□□□ -0.24
HERPUD2-202ENST00000396081 BPESC1Q9GZL8 116 aa13.52□□□□□ -0.24
HERPUD2-202ENST00000396081 M0QY20 66 aa13.52□□□□□ -0.25
HERPUD2-202ENST00000396081 HTN1P15515 57 aa13.52□□□□□ -0.25
HERPUD2-202ENST00000396081 SMIM20Q8N5G0 67 aa13.52□□□□□ -0.25
HERPUD2-202ENST00000396081 IGHV3-73A0A0B4J1V6 119 aa13.51□□□□□ -0.25
HERPUD2-202ENST00000396081 LGALS9O00182 355 aa13.51□□□□□ -0.25
HERPUD2-202ENST00000396081 IGHV3-30-3P0DP02 117 aa13.51□□□□□ -0.25
HERPUD2-202ENST00000396081 CLEC2BQ92478 149 aa13.51□□□□□ -0.25
HERPUD2-202ENST00000396081 TIMM21Q9BVV7 248 aa13.51□□□□□ -0.25
HERPUD2-202ENST00000396081 KLLNB2CW77 178 aa13.51□□□□□ -0.25
HERPUD2-202ENST00000396081 CEMP1Q6PRD7 247 aaPredicted RBP13.51□□□□□ -0.25
HERPUD2-202ENST00000396081 C20orf203Q8NBC4 194 aa13.51□□□□□ -0.25
HERPUD2-202ENST00000396081 APRG1Q8IVJ8 170 aa13.5□□□□□ -0.25
HERPUD2-202ENST00000396081 DUX3Q96PT4 197 aa13.5□□□□□ -0.25
HERPUD2-202ENST00000396081 IGHV1-69P01742 117 aa13.5□□□□□ -0.25
HERPUD2-202ENST00000396081 CD28P10747 220 aa13.5□□□□□ -0.25
HERPUD2-202ENST00000396081 COL12A1Q99715 3063 aa13.5□□□□□ -0.25
HERPUD2-202ENST00000396081 IGLV4-3A0A075B6K6 122 aa13.5□□□□□ -0.25
HERPUD2-202ENST00000396081 A8MZ25 164 aa13.5□□□□□ -0.25
HERPUD2-202ENST00000396081 TRBV7-9A0A0J9YWB2 115 aa13.49□□□□□ -0.25
HERPUD2-202ENST00000396081 TRBV6-5A0A0K0K1A5 114 aa13.49□□□□□ -0.25
HERPUD2-202ENST00000396081 COX6CP09669 75 aa13.49□□□□□ -0.25
HERPUD2-202ENST00000396081 C3orf56Q8N813 242 aa13.49□□□□□ -0.25
HERPUD2-202ENST00000396081 ICOSQ9Y6W8 199 aa13.49□□□□□ -0.25
HERPUD2-202ENST00000396081 RHOHQ15669 191 aa13.49□□□□□ -0.25
HERPUD2-202ENST00000396081 A0A1W2PPR1 153 aa13.48□□□□□ -0.25
HERPUD2-202ENST00000396081 M0QXV9 152 aa13.48□□□□□ -0.25
HERPUD2-202ENST00000396081 ID1P41134 155 aa13.48□□□□□ -0.25
HERPUD2-202ENST00000396081 FBXL19-AS1Q494R0 122 aa13.48□□□□□ -0.25
HERPUD2-202ENST00000396081 TRBV30A0A0K0K1B3 111 aa13.48□□□□□ -0.25
HERPUD2-202ENST00000396081 NSUN5P1Q3KNT7 163 aa13.48□□□□□ -0.25
HERPUD2-202ENST00000396081 ADAMTSL4-AS1Q5T5F5 129 aa13.48□□□□□ -0.25
HERPUD2-202ENST00000396081 DAZ1Q9NQZ3 744 aaKnown RBP13.48□□□□□ -0.25
HERPUD2-202ENST00000396081 ZFHX3Q15911 3703 aa13.48□□□□□ -0.25
HERPUD2-202ENST00000396081 H7C423 109 aa13.48□□□□□ -0.25
HERPUD2-202ENST00000396081 I3L3M4 83 aa13.48□□□□□ -0.25
HERPUD2-202ENST00000396081 NACAE9PAV3 2078 aa13.48□□□□□ -0.25
HERPUD2-202ENST00000396081 IGHV3-16A0A0C4DH30 117 aa13.47□□□□□ -0.25
HERPUD2-202ENST00000396081 FOXC1Q12948 553 aa13.47□□□□□ -0.25
HERPUD2-202ENST00000396081 SPINK13Q1W4C9 94 aa13.47□□□□□ -0.25
HERPUD2-202ENST00000396081 NDUFA12Q9UI09 145 aa13.47□□□□□ -0.25
HERPUD2-202ENST00000396081 MUC6Q6W4X9 2439 aa13.47□□□□□ -0.25
HERPUD2-202ENST00000396081 HIVEP3Q5T1R4 2406 aa13.47□□□□□ -0.25
HERPUD2-202ENST00000396081 ADORA2A-AS1P86434 159 aa13.46□□□□□ -0.25
HERPUD2-202ENST00000396081 NOTCH3Q9UM47 2321 aa13.46□□□□□ -0.25
HERPUD2-202ENST00000396081 RPL13AP40429 203 aaKnown RBP13.46□□□□□ -0.25
HERPUD2-202ENST00000396081 DAND5Q8N907 189 aa13.46□□□□□ -0.25
HERPUD2-202ENST00000396081 LMO4P61968 165 aa13.45□□□□□ -0.26
HERPUD2-202ENST00000396081 BLCAPP62952 87 aa13.45□□□□□ -0.26
HERPUD2-202ENST00000396081 MEIG1Q5JSS6 88 aa13.45□□□□□ -0.26
HERPUD2-202ENST00000396081 C19orf54Q5BKX5 351 aa13.44□□□□□ -0.26
HERPUD2-202ENST00000396081 USMG5Q96IX5 58 aa13.44□□□□□ -0.26
HERPUD2-202ENST00000396081 C9orf85Q96MD7 179 aa13.43□□□□□ -0.26
HERPUD2-202ENST00000396081 CHCHD5Q9BSY4 110 aa13.43□□□□□ -0.26
HERPUD2-202ENST00000396081 C2CD3Q4AC94 2353 aa13.43□□□□□ -0.26
HERPUD2-202ENST00000396081 Q6Q795 121 aa13.43□□□□□ -0.26
HERPUD2-202ENST00000396081 H3BUX3 64 aa13.42□□□□□ -0.26
HERPUD2-202ENST00000396081 PROK1P58294 105 aa13.42□□□□□ -0.26
HERPUD2-202ENST00000396081 LITAFQ99732 161 aa13.42□□□□□ -0.26
HERPUD2-202ENST00000396081 IGHV1OR15-1A0A075B7D0 117 aa13.42□□□□□ -0.26
HERPUD2-202ENST00000396081 A0A0U1RRA0 63 aa13.42□□□□□ -0.26
HERPUD2-202ENST00000396081 KNCNA6PVL3 124 aa13.42□□□□□ -0.26
HERPUD2-202ENST00000396081 A0A0J9YX75 114 aa13.41□□□□□ -0.26
HERPUD2-202ENST00000396081 DCANP1Q8TF63 244 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 321.7 ms