RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 SORL1Q92673 2214 aa13.17□□□□□ -0.3
SIN3A-203ENST00000394949 NDUFC2O95298 119 aa13.17□□□□□ -0.3
SIN3A-203ENST00000394949 NEXN-AS1Q8NBZ9 246 aa13.17□□□□□ -0.3
SIN3A-203ENST00000394949 ADORA2A-AS1P86434 159 aa13.17□□□□□ -0.3
SIN3A-203ENST00000394949 C5orf56Q8N8D9 126 aa13.17□□□□□ -0.3
SIN3A-203ENST00000394949 IGHV4-38-2P0DP08 117 aa13.16□□□□□ -0.3
SIN3A-203ENST00000394949 SEM1Q6ZVN7 128 aa13.16□□□□□ -0.3
SIN3A-203ENST00000394949 C5orf38Q86SI9 138 aa13.16□□□□□ -0.3
SIN3A-203ENST00000394949 FBXL19-AS1Q494R0 122 aa13.16□□□□□ -0.3
SIN3A-203ENST00000394949 CRYGBP07316 175 aa13.16□□□□□ -0.3
SIN3A-203ENST00000394949 MYCNOSP40205 109 aa13.16□□□□□ -0.3
SIN3A-203ENST00000394949 BLCAPP62952 87 aa13.16□□□□□ -0.3
SIN3A-203ENST00000394949 TP73-AS1Q9UF72 201 aa13.15□□□□□ -0.3
SIN3A-203ENST00000394949 A0A1W2PNU3 283 aaPredicted RBP13.15□□□□□ -0.3
SIN3A-203ENST00000394949 DAND5Q8N907 189 aa13.15□□□□□ -0.3
SIN3A-203ENST00000394949 C1orf43Q9BWL3 253 aa13.14□□□□□ -0.31
SIN3A-203ENST00000394949 CCDC168Q8NDH2 2452 aa13.14□□□□□ -0.31
SIN3A-203ENST00000394949 UQCRQO14949 82 aa13.14□□□□□ -0.31
SIN3A-203ENST00000394949 C2orf91Q6ZV80 131 aa13.14□□□□□ -0.31
SIN3A-203ENST00000394949 TRBV7-3A0A075B6L6 115 aa13.14□□□□□ -0.31
SIN3A-203ENST00000394949 HIST2H2BCQ6DN03 193 aa13.14□□□□□ -0.31
SIN3A-203ENST00000394949 LECT2O14960 151 aa13.13□□□□□ -0.31
SIN3A-203ENST00000394949 MSMPQ1L6U9 139 aa13.13□□□□□ -0.31
SIN3A-203ENST00000394949 A0A0J9YXY3 114 aa13.13□□□□□ -0.31
SIN3A-203ENST00000394949 GPHB5Q86YW7 130 aa13.13□□□□□ -0.31
SIN3A-203ENST00000394949 NACAE9PAV3 2078 aa13.13□□□□□ -0.31
SIN3A-203ENST00000394949 TMEM61Q8N0U2 210 aa13.13□□□□□ -0.31
SIN3A-203ENST00000394949 Q8N7P7 452 aa13.13□□□□□ -0.31
SIN3A-203ENST00000394949 COL4A4P53420 1690 aaPredicted RBP13.13□□□□□ -0.31
SIN3A-203ENST00000394949 FUSP35637 526 aaKnown RBP eCLIP13.13□□□□□ -0.31
SIN3A-203ENST00000394949 C16orf74Q96GX8 76 aa13.13□□□□□ -0.31
SIN3A-203ENST00000394949 DEFB136Q30KP8 78 aa13.12□□□□□ -0.31
SIN3A-203ENST00000394949 ZMAT4Q9H898 229 aa13.12□□□□□ -0.31
SIN3A-203ENST00000394949 NAV2Q8IVL1 2488 aa13.12□□□□□ -0.31
SIN3A-203ENST00000394949 P0DMU3 169 aa13.12□□□□□ -0.31
SIN3A-203ENST00000394949 FAM231AP0DMU4 169 aa13.12□□□□□ -0.31
SIN3A-203ENST00000394949 FAM231CP0DMU5 169 aa13.12□□□□□ -0.31
SIN3A-203ENST00000394949 C9orf66Q5T8R8 295 aa13.12□□□□□ -0.31
SIN3A-203ENST00000394949 IGKV2D-26A0A0A0MRZ7 120 aa13.12□□□□□ -0.31
SIN3A-203ENST00000394949 COX7A2LO14548 114 aa13.12□□□□□ -0.31
SIN3A-203ENST00000394949 CITED2Q99967 270 aaPredicted RBP13.11□□□□□ -0.31
SIN3A-203ENST00000394949 SPATA25Q9BR10 227 aa13.11□□□□□ -0.31
SIN3A-203ENST00000394949 TMEM89A2RUT3 159 aa13.11□□□□□ -0.31
SIN3A-203ENST00000394949 PDE6GP18545 87 aa13.11□□□□□ -0.31
SIN3A-203ENST00000394949 CLPSL2Q6UWE3 100 aa13.11□□□□□ -0.31
SIN3A-203ENST00000394949 A0A0J9YY99 117 aa13.1□□□□□ -0.31
SIN3A-203ENST00000394949 CXCL5P42830 114 aa13.1□□□□□ -0.31
SIN3A-203ENST00000394949 NFE4Q86UQ8 179 aa13.1□□□□□ -0.31
SIN3A-203ENST00000394949 TMEM256-PLSCR3K7ERE1 68 aa13.1□□□□□ -0.31
SIN3A-203ENST00000394949 SLURP1P55000 103 aa13.1□□□□□ -0.31
SIN3A-203ENST00000394949 NAV3Q8IVL0 2385 aa13.09□□□□□ -0.31
SIN3A-203ENST00000394949 A0A096LPF7 62 aa13.09□□□□□ -0.31
SIN3A-203ENST00000394949 MAPKAPK5-AS1Q8N8E1 139 aa13.09□□□□□ -0.31
SIN3A-203ENST00000394949 TEX49A0A1B0GTD5 131 aa13.08□□□□□ -0.32
SIN3A-203ENST00000394949 TRBV30A0A0K0K1B3 111 aa13.08□□□□□ -0.32
SIN3A-203ENST00000394949 HIST2H2BDQ6DRA6 164 aa13.08□□□□□ -0.32
SIN3A-203ENST00000394949 ODF3Q96PU9 254 aa13.08□□□□□ -0.32
SIN3A-203ENST00000394949 A0A0J9YX75 114 aa13.07□□□□□ -0.32
SIN3A-203ENST00000394949 C1orf229Q6ZS94 237 aaPredicted RBP13.07□□□□□ -0.32
SIN3A-203ENST00000394949 MIR7-3HGQ8N6C7 128 aa13.07□□□□□ -0.32
SIN3A-203ENST00000394949 KIAA1549LQ6ZVL6 1849 aa13.07□□□□□ -0.32
SIN3A-203ENST00000394949 TRBV10-1A0A0K0K1A3 114 aa13.07□□□□□ -0.32
SIN3A-203ENST00000394949 CRIP1P50238 77 aa13.07□□□□□ -0.32
SIN3A-203ENST00000394949 PRR14LQ5THK1 2151 aa13.07□□□□□ -0.32
SIN3A-203ENST00000394949 RNF185Q96GF1 192 aa13.06□□□□□ -0.32
SIN3A-203ENST00000394949 PRB1P04280 392 aa13.06□□□□□ -0.32
SIN3A-203ENST00000394949 LINC00310P59036 64 aa13.06□□□□□ -0.32
SIN3A-203ENST00000394949 APRG1Q8IVJ8 170 aa13.06□□□□□ -0.32
SIN3A-203ENST00000394949 NCOR2Q9Y618 2525 aa13.06□□□□□ -0.32
SIN3A-203ENST00000394949 NREPQ16612 68 aa13.06□□□□□ -0.32
SIN3A-203ENST00000394949 TMEM223A0PJW6 202 aa13.05□□□□□ -0.32
SIN3A-203ENST00000394949 C2CD3Q4AC94 2353 aa13.05□□□□□ -0.32
SIN3A-203ENST00000394949 ZFP36P26651 326 aaKnown RBP13.05□□□□□ -0.32
SIN3A-203ENST00000394949 IGHV3-33P01772 117 aa13.05□□□□□ -0.32
SIN3A-203ENST00000394949 SPART-AS1P0CW21 52 aa13.05□□□□□ -0.32
SIN3A-203ENST00000394949 IGLV2-11P01706 119 aa13.04□□□□□ -0.32
SIN3A-203ENST00000394949 CFAP126Q5VTH2 177 aa13.04□□□□□ -0.32
SIN3A-203ENST00000394949 Q8N976 141 aa13.04□□□□□ -0.32
SIN3A-203ENST00000394949 IMUPQ9GZP8 106 aa13.04□□□□□ -0.32
SIN3A-203ENST00000394949 SIRPDQ9H106 197 aa13.04□□□□□ -0.32
SIN3A-203ENST00000394949 C3orf22Q8N5N4 141 aa13.04□□□□□ -0.32
SIN3A-203ENST00000394949 Q8NA96 180 aa13.04□□□□□ -0.32
SIN3A-203ENST00000394949 ZNF22P17026 224 aaPredicted RBP13.03□□□□□ -0.32
SIN3A-203ENST00000394949 CCDC140Q96MF4 163 aa13.03□□□□□ -0.32
SIN3A-203ENST00000394949 HIVEP3Q5T1R4 2406 aa13.03□□□□□ -0.32
SIN3A-203ENST00000394949 GYPEP15421 78 aa13.03□□□□□ -0.32
SIN3A-203ENST00000394949 ATP5EP2Q5VTU8 51 aa13.03□□□□□ -0.32
SIN3A-203ENST00000394949 DOPEY1Q5JWR5 2465 aa13.03□□□□□ -0.32
SIN3A-203ENST00000394949 MYO9AB2RTY4 2548 aa13.03□□□□□ -0.32
SIN3A-203ENST00000394949 ADAMTS9Q9P2N4 1935 aa13.03□□□□□ -0.32
SIN3A-203ENST00000394949 Q6ZQT7 251 aa13.03□□□□□ -0.32
SIN3A-203ENST00000394949 UNQ9165/PRO28630Q6UXU0 137 aa13.03□□□□□ -0.32
SIN3A-203ENST00000394949 IGKV2D-24A0A075B6R9 120 aa13.02□□□□□ -0.32
SIN3A-203ENST00000394949 ODF3BA8MYP8 253 aa13.02□□□□□ -0.32
SIN3A-203ENST00000394949 C14orf132Q9NPU4 83 aa13.02□□□□□ -0.32
SIN3A-203ENST00000394949 IGHV4OR15-8A0A075B7B6 117 aa13.02□□□□□ -0.33
SIN3A-203ENST00000394949 A0A087WW49 117 aa13.02□□□□□ -0.33
SIN3A-203ENST00000394949 TMEM131Q92545 1883 aa13.02□□□□□ -0.33
SIN3A-203ENST00000394949 KIF26AQ9ULI4 1882 aaPredicted RBP13.02□□□□□ -0.33
SIN3A-203ENST00000394949 FSTL3O95633 263 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms