RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.55■□□□□ 0.88
CMTM4-202ENST00000394106 LRP1BQ9NZR2 4599 aa20.55■□□□□ 0.88
CMTM4-202ENST00000394106 CDPF1Q6NVV7 123 aa20.54■□□□□ 0.88
CMTM4-202ENST00000394106 A0A087WX48 190 aa20.53■□□□□ 0.88
CMTM4-202ENST00000394106 TRAV8-3A0A0A6YYJ7 113 aa20.53■□□□□ 0.88
CMTM4-202ENST00000394106 TRGC1P0CF51 173 aa20.53■□□□□ 0.88
CMTM4-202ENST00000394106 NTF3P20783 257 aa20.53■□□□□ 0.88
CMTM4-202ENST00000394106 CTRLP40313 264 aa20.53■□□□□ 0.88
CMTM4-202ENST00000394106 KCNIP4Q6PIL6 250 aa20.53■□□□□ 0.88
CMTM4-202ENST00000394106 FAM210AQ96ND0 272 aa20.53■□□□□ 0.88
CMTM4-202ENST00000394106 TM2D2Q9BX73 214 aa20.53■□□□□ 0.88
CMTM4-202ENST00000394106 TRBV6-8A0A0A6YYG3 113 aa20.52■□□□□ 0.88
CMTM4-202ENST00000394106 LRCOL1A6NCL2 159 aa20.52■□□□□ 0.88
CMTM4-202ENST00000394106 SUMO4Q6EEV6 95 aa20.52■□□□□ 0.88
CMTM4-202ENST00000394106 M0QY20 66 aa20.5■□□□□ 0.87
CMTM4-202ENST00000394106 KLK12Q9UKR0 248 aa20.5■□□□□ 0.87
CMTM4-202ENST00000394106 TMEM262E9PQX1 116 aa20.49■□□□□ 0.87
CMTM4-202ENST00000394106 H7C1H1 209 aa20.49■□□□□ 0.87
CMTM4-202ENST00000394106 GATCO43716 136 aaKnown RBP20.49■□□□□ 0.87
CMTM4-202ENST00000394106 TWIST1Q15672 202 aa20.49■□□□□ 0.87
CMTM4-202ENST00000394106 WDR73Q6P4I2 378 aa20.49■□□□□ 0.87
CMTM4-202ENST00000394106 SMIM7Q9BQ49 75 aa20.49■□□□□ 0.87
CMTM4-202ENST00000394106 DPH3P1Q9H4G8 78 aa20.49■□□□□ 0.87
CMTM4-202ENST00000394106 DNAH5Q8TE73 4624 aa20.49■□□□□ 0.87
CMTM4-202ENST00000394106 CHCHD7Q9BUK0 85 aa20.48■□□□□ 0.87
CMTM4-202ENST00000394106 SRP19P09132 144 aaKnown RBP20.46■□□□□ 0.87
CMTM4-202ENST00000394106 FAM231DQ6ZW35 169 aa20.46■□□□□ 0.87
CMTM4-202ENST00000394106 GTSF1Q8WW33 167 aa20.46■□□□□ 0.87
CMTM4-202ENST00000394106 DNAJC30Q96LL9 226 aa20.46■□□□□ 0.87
CMTM4-202ENST00000394106 CHCHD5Q9BSY4 110 aa20.46■□□□□ 0.87
CMTM4-202ENST00000394106 NDUFS6O75380 124 aaKnown RBP20.45■□□□□ 0.86
CMTM4-202ENST00000394106 ELOBQ15370 118 aa20.45■□□□□ 0.86
CMTM4-202ENST00000394106 TMEM97Q5BJF2 176 aa20.45■□□□□ 0.86
CMTM4-202ENST00000394106 MAPKAPK5-AS1Q8N8E1 139 aa20.45■□□□□ 0.86
CMTM4-202ENST00000394106 UBE2WQ96B02 151 aa20.45■□□□□ 0.86
CMTM4-202ENST00000394106 CNFNQ9BYD5 112 aa20.45■□□□□ 0.86
CMTM4-202ENST00000394106 ZNF727A8MUV8 499 aa20.44■□□□□ 0.86
CMTM4-202ENST00000394106 RASL11AQ6T310 242 aa20.44■□□□□ 0.86
CMTM4-202ENST00000394106 NTM-AS1Q6ZSK4 140 aa20.44■□□□□ 0.86
CMTM4-202ENST00000394106 Q8N814 137 aa20.44■□□□□ 0.86
CMTM4-202ENST00000394106 RMI2Q96E14 147 aa20.43■□□□□ 0.86
CMTM4-202ENST00000394106 IGLV5-52A0A0A0MRZ9 124 aa20.42■□□□□ 0.86
CMTM4-202ENST00000394106 A8MWL6 223 aa20.42■□□□□ 0.86
CMTM4-202ENST00000394106 MPV17L2Q567V2 206 aa20.42■□□□□ 0.86
CMTM4-202ENST00000394106 LINC01551Q86U37 167 aa20.42■□□□□ 0.86
CMTM4-202ENST00000394106 HSPG2P98160 4391 aa20.41■□□□□ 0.86
CMTM4-202ENST00000394106 IGKV2D-24A0A075B6R9 120 aa20.41■□□□□ 0.86
CMTM4-202ENST00000394106 KRTAP10-1P60331 282 aa20.41■□□□□ 0.86
CMTM4-202ENST00000394106 PGLYRP4Q96LB8 373 aa20.41■□□□□ 0.86
CMTM4-202ENST00000394106 COX11Q9Y6N1 276 aa20.41■□□□□ 0.86
CMTM4-202ENST00000394106 LECT2O14960 151 aa20.4■□□□□ 0.86
CMTM4-202ENST00000394106 GCSHP23434 173 aa20.4■□□□□ 0.86
CMTM4-202ENST00000394106 WFDC2Q14508 124 aa20.4■□□□□ 0.86
CMTM4-202ENST00000394106 TEX261Q6UWH6 196 aa20.4■□□□□ 0.86
CMTM4-202ENST00000394106 C15orf54Q8N8G6 183 aa20.4■□□□□ 0.86
CMTM4-202ENST00000394106 TRBV25-1A0A075B6N4 114 aa20.39■□□□□ 0.85
CMTM4-202ENST00000394106 PKIAP61925 76 aa20.39■□□□□ 0.85
CMTM4-202ENST00000394106 NTN5Q8WTR8 489 aaPredicted RBP20.39■□□□□ 0.85
CMTM4-202ENST00000394106 NIT2Q9NQR4 276 aa20.39■□□□□ 0.85
CMTM4-202ENST00000394106 CT83Q5H943 113 aa20.38■□□□□ 0.85
CMTM4-202ENST00000394106 SMIM15Q7Z3B0 74 aa20.38■□□□□ 0.85
CMTM4-202ENST00000394106 APOBP04114 4563 aaKnown RBP20.38■□□□□ 0.85
CMTM4-202ENST00000394106 ANGP03950 147 aaKnown RBP20.37■□□□□ 0.85
CMTM4-202ENST00000394106 GAGE6Q13070 117 aa20.37■□□□□ 0.85
CMTM4-202ENST00000394106 Q8N976 141 aa20.37■□□□□ 0.85
CMTM4-202ENST00000394106 BAALCQ8WXS3 180 aa20.37■□□□□ 0.85
CMTM4-202ENST00000394106 KRTAP4-5Q9BYR2 181 aa20.37■□□□□ 0.85
CMTM4-202ENST00000394106 IGHV1-24A0A0C4DH33 117 aa20.36■□□□□ 0.85
CMTM4-202ENST00000394106 Q0VG73 95 aa20.36■□□□□ 0.85
CMTM4-202ENST00000394106 ATRAIDQ6UW56 229 aa20.36■□□□□ 0.85
CMTM4-202ENST00000394106 TRAV26-2A0A0B4J265 109 aa20.35■□□□□ 0.85
CMTM4-202ENST00000394106 CRPP02741 224 aa20.35■□□□□ 0.85
CMTM4-202ENST00000394106 FOXA3P55318 350 aaPredicted RBP20.35■□□□□ 0.85
CMTM4-202ENST00000394106 IQCJQ1A5X6 159 aa20.35■□□□□ 0.85
CMTM4-202ENST00000394106 ENHOQ6UWT2 76 aa20.34■□□□□ 0.85
CMTM4-202ENST00000394106 GATD1Q8NB37 220 aa20.34■□□□□ 0.85
CMTM4-202ENST00000394106 DEFB104AQ8WTQ1 72 aa20.34■□□□□ 0.85
CMTM4-202ENST00000394106 BORCS7Q96B45 105 aa20.34■□□□□ 0.85
CMTM4-202ENST00000394106 OSTCQ9NRP0 149 aa20.34■□□□□ 0.85
CMTM4-202ENST00000394106 C9JQL5 133 aa20.32■□□□□ 0.84
CMTM4-202ENST00000394106 RBX1P62877 108 aa20.32■□□□□ 0.84
CMTM4-202ENST00000394106 TMEM241Q24JQ0 296 aa20.32■□□□□ 0.84
CMTM4-202ENST00000394106 TSKUQ8WUA8 353 aa20.32■□□□□ 0.84
CMTM4-202ENST00000394106 SRSF3P84103 164 aaKnown RBP20.31■□□□□ 0.84
CMTM4-202ENST00000394106 FAM74A3Q4VXF1 159 aa20.31■□□□□ 0.84
CMTM4-202ENST00000394106 Q8N1X5 172 aa20.31■□□□□ 0.84
CMTM4-202ENST00000394106 C1orf43Q9BWL3 253 aa20.31■□□□□ 0.84
CMTM4-202ENST00000394106 HIGD1CA8MV81 97 aa20.3■□□□□ 0.84
CMTM4-202ENST00000394106 PEA15Q15121 130 aa20.3■□□□□ 0.84
CMTM4-202ENST00000394106 IGLV2-33A0A075B6J2 118 aaPredicted RBP20.29■□□□□ 0.84
CMTM4-202ENST00000394106 FRZBQ92765 325 aa20.29■□□□□ 0.84
CMTM4-202ENST00000394106 TMEM243Q9BU79 118 aa20.29■□□□□ 0.84
CMTM4-202ENST00000394106 GFRA4Q9GZZ7 299 aa20.29■□□□□ 0.84
CMTM4-202ENST00000394106 ABCA13Q86UQ4 5058 aa20.28■□□□□ 0.84
CMTM4-202ENST00000394106 XGP55808 180 aa20.28■□□□□ 0.84
CMTM4-202ENST00000394106 CLPSL2Q6UWE3 100 aa20.28■□□□□ 0.84
CMTM4-202ENST00000394106 ISOC2Q96AB3 205 aa20.28■□□□□ 0.84
CMTM4-202ENST00000394106 RPL39LQ96EH5 51 aaKnown RBP20.28■□□□□ 0.84
CMTM4-202ENST00000394106 RPL23P62829 140 aaKnown RBP20.27■□□□□ 0.84
CMTM4-202ENST00000394106 COTL1Q14019 142 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms