RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 MIAQ16674 131 aa15.08■□□□□ 0.01
SHANK1-203ENST00000391813 LRRC75A-AS1Q8N1F1 130 aa15.08■□□□□ 0.01
SHANK1-203ENST00000391813 MYCNOSP40205 109 aa15.08■□□□□ 0
SHANK1-203ENST00000391813 P0DMU3 169 aa15.07■□□□□ 0
SHANK1-203ENST00000391813 FAM231AP0DMU4 169 aa15.07■□□□□ 0
SHANK1-203ENST00000391813 FAM231CP0DMU5 169 aa15.07■□□□□ 0
SHANK1-203ENST00000391813 ZNF80P51504 273 aaPredicted RBP15.07■□□□□ 0
SHANK1-203ENST00000391813 PLXNB1O43157 2135 aa15.07■□□□□ 0
SHANK1-203ENST00000391813 TRAV4A0A0B4J268 109 aa15.07■□□□□ 0
SHANK1-203ENST00000391813 NKAPP1Q8N9T2 125 aa15.07■□□□□ 0
SHANK1-203ENST00000391813 KIAA1549LQ6ZVL6 1849 aa15.06■□□□□ 0
SHANK1-203ENST00000391813 TEX49A0A1B0GTD5 131 aa15.06■□□□□ 0
SHANK1-203ENST00000391813 DAZ2Q13117 558 aaKnown RBP15.06■□□□□ 0
SHANK1-203ENST00000391813 DAZ4Q86SG3 579 aaKnown RBP15.06■□□□□ 0
SHANK1-203ENST00000391813 DAZ3Q9NR90 486 aaKnown RBP15.06■□□□□ 0
SHANK1-203ENST00000391813 A0A0J9YY99 117 aa15.06■□□□□ 0
SHANK1-203ENST00000391813 C5orf47Q569G3 176 aa15.06■□□□□ 0
SHANK1-203ENST00000391813 Q8N976 141 aa15.06■□□□□ 0
SHANK1-203ENST00000391813 MDFICQ9P1T7 246 aa15.06■□□□□ 0
SHANK1-203ENST00000391813 Q8N9W7 124 aa15.05■□□□□ 0
SHANK1-203ENST00000391813 NCKAP5O14513 1909 aa15.05■□□□□ -0
SHANK1-203ENST00000391813 MAPKAPK5-AS1Q8N8E1 139 aa15.05■□□□□ -0
SHANK1-203ENST00000391813 DAND5Q8N907 189 aa15.05■□□□□ -0
SHANK1-203ENST00000391813 FANCD2OSQ96PS1 177 aa15.05■□□□□ -0
SHANK1-203ENST00000391813 ZNF843Q8N446 348 aa15.05■□□□□ -0
SHANK1-203ENST00000391813 A0A0J9YXY3 114 aa15.04■□□□□ -0
SHANK1-203ENST00000391813 COX7A2LO14548 114 aa15.04■□□□□ -0
SHANK1-203ENST00000391813 LECT2O14960 151 aa15.04■□□□□ -0
SHANK1-203ENST00000391813 CFAP126Q5VTH2 177 aa15.04■□□□□ -0
SHANK1-203ENST00000391813 IMUPQ9GZP8 106 aa15.04■□□□□ -0
SHANK1-203ENST00000391813 COX7B2Q8TF08 81 aa15.04■□□□□ -0
SHANK1-203ENST00000391813 NAV2Q8IVL1 2488 aa15.03■□□□□ -0
SHANK1-203ENST00000391813 UFSP1Q6NVU6 142 aa15.03■□□□□ -0
SHANK1-203ENST00000391813 C3orf22Q8N5N4 141 aa15.03■□□□□ -0
SHANK1-203ENST00000391813 K7EMT4 169 aa15.03■□□□□ -0
SHANK1-203ENST00000391813 IGHV4-59P01825 116 aa15.03■□□□□ -0
SHANK1-203ENST00000391813 TMEM131Q92545 1883 aa15.02■□□□□ -0
SHANK1-203ENST00000391813 TRBV30A0A0K0K1B3 111 aa15.02■□□□□ -0
SHANK1-203ENST00000391813 TMEM61Q8N0U2 210 aa15.02■□□□□ -0
SHANK1-203ENST00000391813 DSCAML1Q8TD84 2053 aa15.02■□□□□ -0
SHANK1-203ENST00000391813 C5orf38Q86SI9 138 aa15.02□□□□□ -0.01
SHANK1-203ENST00000391813 XCL1P47992 114 aa15.01□□□□□ -0.01
SHANK1-203ENST00000391813 ANGP03950 147 aaKnown RBP15.01□□□□□ -0.01
SHANK1-203ENST00000391813 AJUBAQ96IF1 538 aa15.01□□□□□ -0.01
SHANK1-203ENST00000391813 PDE6GP18545 87 aa15.01□□□□□ -0.01
SHANK1-203ENST00000391813 IGHV3-33P01772 117 aa15□□□□□ -0.01
SHANK1-203ENST00000391813 DAD1P61803 113 aa15□□□□□ -0.01
SHANK1-203ENST00000391813 WISP2O76076 250 aa15□□□□□ -0.01
SHANK1-203ENST00000391813 PCDH15Q96QU1 1955 aa15□□□□□ -0.01
SHANK1-203ENST00000391813 HIST2H2BCQ6DN03 193 aa15□□□□□ -0.01
SHANK1-203ENST00000391813 MED12LQ86YW9 2145 aa15□□□□□ -0.01
SHANK1-203ENST00000391813 SONP18583 2426 aaKnown RBP14.99□□□□□ -0.01
SHANK1-203ENST00000391813 TMEM256-PLSCR3K7ERE1 68 aa14.99□□□□□ -0.01
SHANK1-203ENST00000391813 HIST2H2BDQ6DRA6 164 aa14.99□□□□□ -0.01
SHANK1-203ENST00000391813 FUSP35637 526 aaKnown RBP eCLIP14.98□□□□□ -0.01
SHANK1-203ENST00000391813 NRGNQ92686 78 aa14.98□□□□□ -0.01
SHANK1-203ENST00000391813 SRCAPQ6ZRS2 3230 aa14.98□□□□□ -0.01
SHANK1-203ENST00000391813 F5H768 121 aa14.97□□□□□ -0.01
SHANK1-203ENST00000391813 K7EQD1 137 aa14.97□□□□□ -0.01
SHANK1-203ENST00000391813 CRIP1P50238 77 aa14.97□□□□□ -0.01
SHANK1-203ENST00000391813 CCDC168Q8NDH2 2452 aa14.97□□□□□ -0.01
SHANK1-203ENST00000391813 TRBV7-3A0A075B6L6 115 aa14.97□□□□□ -0.01
SHANK1-203ENST00000391813 XGP55808 180 aa14.97□□□□□ -0.01
SHANK1-203ENST00000391813 NFE4Q86UQ8 179 aa14.97□□□□□ -0.01
SHANK1-203ENST00000391813 MUC22E2RYF6 1773 aaPredicted RBP14.97□□□□□ -0.01
SHANK1-203ENST00000391813 PTPRSQ13332 1948 aa14.97□□□□□ -0.01
SHANK1-203ENST00000391813 Q8N7P7 452 aa14.96□□□□□ -0.01
SHANK1-203ENST00000391813 RNF185Q96GF1 192 aa14.96□□□□□ -0.01
SHANK1-203ENST00000391813 TLN1Q9Y490 2541 aaKnown RBP14.96□□□□□ -0.01
SHANK1-203ENST00000391813 MSMPQ1L6U9 139 aa14.96□□□□□ -0.01
SHANK1-203ENST00000391813 NOP10Q9NPE3 64 aaKnown RBP14.96□□□□□ -0.01
SHANK1-203ENST00000391813 ATP5EP2Q5VTU8 51 aa14.96□□□□□ -0.02
SHANK1-203ENST00000391813 APOC4P55056 127 aa14.95□□□□□ -0.02
SHANK1-203ENST00000391813 UBE2DNLQ8IWF7 75 aa14.95□□□□□ -0.02
SHANK1-203ENST00000391813 CLUHP3Q96NS8 147 aa14.95□□□□□ -0.02
SHANK1-203ENST00000391813 IGHV4-38-2P0DP08 117 aa14.95□□□□□ -0.02
SHANK1-203ENST00000391813 MIR7-3HGQ8N6C7 128 aa14.95□□□□□ -0.02
SHANK1-203ENST00000391813 PCNX3Q9H6A9 2034 aa14.95□□□□□ -0.02
SHANK1-203ENST00000391813 C5orf56Q8N8D9 126 aa14.94□□□□□ -0.02
SHANK1-203ENST00000391813 Q6Q795 121 aa14.94□□□□□ -0.02
SHANK1-203ENST00000391813 TRIAP1O43715 76 aa14.94□□□□□ -0.02
SHANK1-203ENST00000391813 IGLV2-11P01706 119 aa14.94□□□□□ -0.02
SHANK1-203ENST00000391813 CEP192Q8TEP8 1941 aa14.93□□□□□ -0.02
SHANK1-203ENST00000391813 NDUFA7O95182 113 aa14.93□□□□□ -0.02
SHANK1-203ENST00000391813 ZNF22P17026 224 aaPredicted RBP14.93□□□□□ -0.02
SHANK1-203ENST00000391813 NREPQ16612 68 aa14.93□□□□□ -0.02
SHANK1-203ENST00000391813 C14orf132Q9NPU4 83 aa14.93□□□□□ -0.02
SHANK1-203ENST00000391813 C1orf229Q6ZS94 237 aaPredicted RBP14.93□□□□□ -0.02
SHANK1-203ENST00000391813 TMEM223A0PJW6 202 aa14.93□□□□□ -0.02
SHANK1-203ENST00000391813 GPHB5Q86YW7 130 aa14.92□□□□□ -0.02
SHANK1-203ENST00000391813 CXCL5P42830 114 aa14.92□□□□□ -0.02
SHANK1-203ENST00000391813 Q9HAA7 133 aa14.91□□□□□ -0.02
SHANK1-203ENST00000391813 C19orf84I3L1E1 186 aa14.91□□□□□ -0.02
SHANK1-203ENST00000391813 FSTL3O95633 263 aa14.91□□□□□ -0.02
SHANK1-203ENST00000391813 MRPS12O15235 138 aaKnown RBP14.91□□□□□ -0.02
SHANK1-203ENST00000391813 CLPSL2Q6UWE3 100 aa14.9□□□□□ -0.02
SHANK1-203ENST00000391813 IGHV3-30P01768 117 aa14.9□□□□□ -0.02
SHANK1-203ENST00000391813 IGHV3-30-5P0DP03 117 aa14.9□□□□□ -0.02
SHANK1-203ENST00000391813 WNK1Q9H4A3 2382 aa14.9□□□□□ -0.02
SHANK1-203ENST00000391813 TRBV10-1A0A0K0K1A3 114 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms