RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 DEFB113Q30KQ7 82 aa12.2□□□□□ -0.46
PTPRN2-201ENST00000389413 ZFAND2AQ8N6M9 145 aa12.2□□□□□ -0.46
PTPRN2-201ENST00000389413 NEXN-AS1Q8NBZ9 246 aa12.2□□□□□ -0.46
PTPRN2-201ENST00000389413 IGHG4P01861 327 aa12.2□□□□□ -0.46
PTPRN2-201ENST00000389413 HERV-K104P63124 156 aa12.2□□□□□ -0.46
PTPRN2-201ENST00000389413 SLC25A29Q8N8R3 303 aa12.2□□□□□ -0.46
PTPRN2-201ENST00000389413 SOCS3O14543 225 aa12.2□□□□□ -0.46
PTPRN2-201ENST00000389413 DAD1P61803 113 aa12.2□□□□□ -0.46
PTPRN2-201ENST00000389413 ARHGAP32A7KAX9 2087 aa12.19□□□□□ -0.46
PTPRN2-201ENST00000389413 URB1-AS1Q96HZ7 61 aa12.19□□□□□ -0.46
PTPRN2-201ENST00000389413 C19orf84I3L1E1 186 aa12.19□□□□□ -0.46
PTPRN2-201ENST00000389413 OPRPNQ99935 248 aaPredicted RBP12.19□□□□□ -0.46
PTPRN2-201ENST00000389413 NXPH4O95158 308 aa12.18□□□□□ -0.46
PTPRN2-201ENST00000389413 FOXI1Q12951 378 aa12.18□□□□□ -0.46
PTPRN2-201ENST00000389413 C2orf91Q6ZV80 131 aa12.18□□□□□ -0.46
PTPRN2-201ENST00000389413 C15orf53Q8NAA6 179 aa12.18□□□□□ -0.46
PTPRN2-201ENST00000389413 ODF3Q96PU9 254 aa12.18□□□□□ -0.46
PTPRN2-201ENST00000389413 PTPN13Q12923 2485 aa12.18□□□□□ -0.46
PTPRN2-201ENST00000389413 DSCAML1Q8TD84 2053 aa12.18□□□□□ -0.46
PTPRN2-201ENST00000389413 F5H768 121 aa12.18□□□□□ -0.46
PTPRN2-201ENST00000389413 DAZ2Q13117 558 aaKnown RBP12.18□□□□□ -0.46
PTPRN2-201ENST00000389413 LINC01620Q4KN68 170 aa12.18□□□□□ -0.46
PTPRN2-201ENST00000389413 DAZ4Q86SG3 579 aaKnown RBP12.18□□□□□ -0.46
PTPRN2-201ENST00000389413 DAZ3Q9NR90 486 aaKnown RBP12.18□□□□□ -0.46
PTPRN2-201ENST00000389413 A0A0C4DFX4 3053 aa12.18□□□□□ -0.46
PTPRN2-201ENST00000389413 K7EQD1 137 aa12.18□□□□□ -0.46
PTPRN2-201ENST00000389413 ICOSQ9Y6W8 199 aa12.17□□□□□ -0.46
PTPRN2-201ENST00000389413 NOTCH2Q04721 2471 aa12.17□□□□□ -0.46
PTPRN2-201ENST00000389413 NDUFA11Q86Y39 141 aa12.17□□□□□ -0.46
PTPRN2-201ENST00000389413 NCOR2Q9Y618 2525 aa12.17□□□□□ -0.46
PTPRN2-201ENST00000389413 TMEM61Q8N0U2 210 aa12.16□□□□□ -0.46
PTPRN2-201ENST00000389413 DPH3Q96FX2 82 aa12.16□□□□□ -0.46
PTPRN2-201ENST00000389413 TRBV7-3A0A075B6L6 115 aa12.16□□□□□ -0.46
PTPRN2-201ENST00000389413 MRPS12O15235 138 aaKnown RBP12.16□□□□□ -0.46
PTPRN2-201ENST00000389413 MAPKAPK5-AS1Q8N8E1 139 aa12.16□□□□□ -0.46
PTPRN2-201ENST00000389413 C11orf21Q9P2W6 132 aa12.16□□□□□ -0.46
PTPRN2-201ENST00000389413 IGHV1-58A0A0C4DH39 117 aa12.15□□□□□ -0.46
PTPRN2-201ENST00000389413 K7EQG2 157 aa12.15□□□□□ -0.46
PTPRN2-201ENST00000389413 EDA2RQ9HAV5 297 aa12.15□□□□□ -0.46
PTPRN2-201ENST00000389413 IGHV3-30-3P0DP02 117 aa12.15□□□□□ -0.47
PTPRN2-201ENST00000389413 PRUNE2Q8WUY3 3088 aa12.14□□□□□ -0.47
PTPRN2-201ENST00000389413 NRACQ8N912 160 aa12.14□□□□□ -0.47
PTPRN2-201ENST00000389413 C16orf74Q96GX8 76 aa12.14□□□□□ -0.47
PTPRN2-201ENST00000389413 SPANXDQ9BXN6 97 aa12.14□□□□□ -0.47
PTPRN2-201ENST00000389413 CNFNQ9BYD5 112 aa12.14□□□□□ -0.47
PTPRN2-201ENST00000389413 BAALC-AS2P0C853 105 aa12.14□□□□□ -0.47
PTPRN2-201ENST00000389413 VSIG2Q96IQ7 327 aa12.14□□□□□ -0.47
PTPRN2-201ENST00000389413 TRAV25A0A0B4J276 109 aa12.13□□□□□ -0.47
PTPRN2-201ENST00000389413 ATP6V0E2Q8NHE4 81 aa12.13□□□□□ -0.47
PTPRN2-201ENST00000389413 A0A096LPF7 62 aa12.13□□□□□ -0.47
PTPRN2-201ENST00000389413 COL4A2P08572 1712 aa12.13□□□□□ -0.47
PTPRN2-201ENST00000389413 C2CD3Q4AC94 2353 aa12.13□□□□□ -0.47
PTPRN2-201ENST00000389413 CDH23Q9H251 3354 aa12.12□□□□□ -0.47
PTPRN2-201ENST00000389413 XCL1P47992 114 aa12.12□□□□□ -0.47
PTPRN2-201ENST00000389413 APOC4P55056 127 aa12.12□□□□□ -0.47
PTPRN2-201ENST00000389413 DAND5Q8N907 189 aa12.12□□□□□ -0.47
PTPRN2-201ENST00000389413 ANGP03950 147 aaKnown RBP12.12□□□□□ -0.47
PTPRN2-201ENST00000389413 C4orf3Q8WVX3 66 aa12.12□□□□□ -0.47
PTPRN2-201ENST00000389413 C5orf38Q86SI9 138 aa12.12□□□□□ -0.47
PTPRN2-201ENST00000389413 NAV2Q8IVL1 2488 aa12.12□□□□□ -0.47
PTPRN2-201ENST00000389413 CHD7Q9P2D1 2997 aa12.12□□□□□ -0.47
PTPRN2-201ENST00000389413 GAS8-AS1O95177 125 aa12.11□□□□□ -0.47
PTPRN2-201ENST00000389413 C9orf153Q5TBE3 101 aa12.11□□□□□ -0.47
PTPRN2-201ENST00000389413 RBX1P62877 108 aa12.11□□□□□ -0.47
PTPRN2-201ENST00000389413 CLPSL2Q6UWE3 100 aa12.11□□□□□ -0.47
PTPRN2-201ENST00000389413 SORL1Q92673 2214 aa12.11□□□□□ -0.47
PTPRN2-201ENST00000389413 LGALS9O00182 355 aa12.11□□□□□ -0.47
PTPRN2-201ENST00000389413 PRB1P04280 392 aa12.11□□□□□ -0.47
PTPRN2-201ENST00000389413 CEMP1Q6PRD7 247 aaPredicted RBP12.11□□□□□ -0.47
PTPRN2-201ENST00000389413 PTH2Q96A98 100 aa12.11□□□□□ -0.47
PTPRN2-201ENST00000389413 IGHV4-4A0A075B6R2 117 aa12.11□□□□□ -0.47
PTPRN2-201ENST00000389413 PIEZO1Q92508 2521 aa12.11□□□□□ -0.47
PTPRN2-201ENST00000389413 CLPSL1A2RUU4 121 aa12.1□□□□□ -0.47
PTPRN2-201ENST00000389413 PRR9Q5T870 116 aa12.1□□□□□ -0.47
PTPRN2-201ENST00000389413 CEP295Q9C0D2 2601 aa12.1□□□□□ -0.47
PTPRN2-201ENST00000389413 ZNF561-AS1K7EIQ3 104 aa12.1□□□□□ -0.47
PTPRN2-201ENST00000389413 TRBV10-2A0A0K0K1G8 114 aa12.09□□□□□ -0.47
PTPRN2-201ENST00000389413 ACYP1P07311 99 aa12.09□□□□□ -0.47
PTPRN2-201ENST00000389413 PRORYQ9H606 182 aa12.09□□□□□ -0.47
PTPRN2-201ENST00000389413 MAP6D1Q9H9H5 199 aa12.09□□□□□ -0.47
PTPRN2-201ENST00000389413 SND1-IT1Q9HBX3 110 aa12.09□□□□□ -0.47
PTPRN2-201ENST00000389413 TCL1BO95988 128 aa12.09□□□□□ -0.47
PTPRN2-201ENST00000389413 P0DMU3 169 aa12.09□□□□□ -0.47
PTPRN2-201ENST00000389413 FAM231AP0DMU4 169 aa12.09□□□□□ -0.47
PTPRN2-201ENST00000389413 FAM231CP0DMU5 169 aa12.09□□□□□ -0.47
PTPRN2-201ENST00000389413 TNRC6BQ9UPQ9 1833 aaKnown RBP12.09□□□□□ -0.47
PTPRN2-201ENST00000389413 MYO9AB2RTY4 2548 aa12.08□□□□□ -0.47
PTPRN2-201ENST00000389413 A0A0J9YY99 117 aa12.08□□□□□ -0.48
PTPRN2-201ENST00000389413 RNASE3P12724 160 aaKnown RBP12.08□□□□□ -0.48
PTPRN2-201ENST00000389413 CDSNQ15517 529 aa12.08□□□□□ -0.48
PTPRN2-201ENST00000389413 A0A0J9YXY3 114 aa12.08□□□□□ -0.48
PTPRN2-201ENST00000389413 M0QY20 66 aa12.08□□□□□ -0.48
PTPRN2-201ENST00000389413 Q6ZUT4 128 aa12.08□□□□□ -0.48
PTPRN2-201ENST00000389413 COX7B2Q8TF08 81 aa12.08□□□□□ -0.48
PTPRN2-201ENST00000389413 TRBV10-1A0A0K0K1A3 114 aa12.07□□□□□ -0.48
PTPRN2-201ENST00000389413 UBL5Q9BZL1 73 aa12.07□□□□□ -0.48
PTPRN2-201ENST00000389413 XIRP2A4UGR9 3374 aa12.07□□□□□ -0.48
PTPRN2-201ENST00000389413 TRBV27A0A0K0K1C4 114 aa12.07□□□□□ -0.48
PTPRN2-201ENST00000389413 H3BT86 120 aa12.07□□□□□ -0.48
PTPRN2-201ENST00000389413 CRYBA4P53673 196 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms