RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 CTDSP1Q9GZU7 261 aa11.09□□□□□ -0.63
SNRPB-201ENST00000381342 NAT8BQ9UHF3 227 aa11.09□□□□□ -0.63
SNRPB-201ENST00000381342 C1orf134Q5TEV5 83 aa11.08□□□□□ -0.64
SNRPB-201ENST00000381342 NEXN-AS1Q8NBZ9 246 aa11.08□□□□□ -0.64
SNRPB-201ENST00000381342 TMEM242Q9NWH2 141 aa11.08□□□□□ -0.64
SNRPB-201ENST00000381342 RPL36AP83881 106 aaKnown RBP11.07□□□□□ -0.64
SNRPB-201ENST00000381342 SMIM15Q7Z3B0 74 aa11.07□□□□□ -0.64
SNRPB-201ENST00000381342 WFDC10BQ8IUB3 73 aa11.07□□□□□ -0.64
SNRPB-201ENST00000381342 RPL36ALQ969Q0 106 aaKnown RBP11.07□□□□□ -0.64
SNRPB-201ENST00000381342 Q9H8V8 135 aa11.07□□□□□ -0.64
SNRPB-201ENST00000381342 RPS10P5Q9NQ39 176 aa11.07□□□□□ -0.64
SNRPB-201ENST00000381342 BIRC6Q9NR09 4857 aa11.06□□□□□ -0.64
SNRPB-201ENST00000381342 TIRAPP58753 221 aa11.06□□□□□ -0.64
SNRPB-201ENST00000381342 UBE2D3P61077 147 aa11.06□□□□□ -0.64
SNRPB-201ENST00000381342 UBE2D2P62837 147 aa11.06□□□□□ -0.64
SNRPB-201ENST00000381342 Q6ZR54 194 aa11.06□□□□□ -0.64
SNRPB-201ENST00000381342 GTSF1LQ9H1H1 148 aa11.06□□□□□ -0.64
SNRPB-201ENST00000381342 TRBV7-3A0A075B6L6 115 aa11.05□□□□□ -0.64
SNRPB-201ENST00000381342 TRAV26-2A0A0B4J265 109 aa11.05□□□□□ -0.64
SNRPB-201ENST00000381342 M0QY20 66 aa11.05□□□□□ -0.64
SNRPB-201ENST00000381342 SIVA1O15304 175 aa11.05□□□□□ -0.64
SNRPB-201ENST00000381342 RIGQ13278 110 aa11.05□□□□□ -0.64
SNRPB-201ENST00000381342 NBDYA0A0U1RRE5 68 aa11.04□□□□□ -0.64
SNRPB-201ENST00000381342 H7C1H1 209 aa11.04□□□□□ -0.64
SNRPB-201ENST00000381342 RTL8CO15255 209 aa11.04□□□□□ -0.64
SNRPB-201ENST00000381342 RASL11AQ6T310 242 aa11.04□□□□□ -0.64
SNRPB-201ENST00000381342 KRTAP1-5Q9BYS1 174 aa11.04□□□□□ -0.64
SNRPB-201ENST00000381342 DNAH10Q8IVF4 4471 aa11.04□□□□□ -0.64
SNRPB-201ENST00000381342 FRAS1Q86XX4 4008 aa11.04□□□□□ -0.64
SNRPB-201ENST00000381342 DNAH2Q9P225 4427 aa11.03□□□□□ -0.64
SNRPB-201ENST00000381342 IGHV3-38A0A0C4DH36 116 aa11.03□□□□□ -0.64
SNRPB-201ENST00000381342 OR10J3Q5JRS4 329 aa11.03□□□□□ -0.64
SNRPB-201ENST00000381342 LELP1Q5T871 98 aa11.03□□□□□ -0.64
SNRPB-201ENST00000381342 MRPL54Q6P161 138 aaKnown RBP11.03□□□□□ -0.64
SNRPB-201ENST00000381342 GATD1Q8NB37 220 aa11.03□□□□□ -0.64
SNRPB-201ENST00000381342 IMMP2LQ96T52 175 aa11.03□□□□□ -0.64
SNRPB-201ENST00000381342 TMEM191AQ9H0A3 160 aa11.03□□□□□ -0.64
SNRPB-201ENST00000381342 TTC32Q5I0X7 151 aa11.02□□□□□ -0.65
SNRPB-201ENST00000381342 SMCO4Q9NRQ5 59 aa11.02□□□□□ -0.65
SNRPB-201ENST00000381342 TRAV8-6A0A0B4J262 113 aa11.01□□□□□ -0.65
SNRPB-201ENST00000381342 CAMPP49913 170 aa11.01□□□□□ -0.65
SNRPB-201ENST00000381342 AMN1Q8IY45 258 aa11.01□□□□□ -0.65
SNRPB-201ENST00000381342 C6orf223Q8N319 242 aa11.01□□□□□ -0.65
SNRPB-201ENST00000381342 RPL39LQ96EH5 51 aaKnown RBP11.01□□□□□ -0.65
SNRPB-201ENST00000381342 RNF185Q96GF1 192 aa11.01□□□□□ -0.65
SNRPB-201ENST00000381342 TNFRSF18Q9Y5U5 241 aa11.01□□□□□ -0.65
SNRPB-201ENST00000381342 A0A1B0GXF2 115 aa11□□□□□ -0.65
SNRPB-201ENST00000381342 SCO1O75880 301 aa11□□□□□ -0.65
SNRPB-201ENST00000381342 HBBP68871 147 aa11□□□□□ -0.65
SNRPB-201ENST00000381342 CBLN2Q8IUK8 224 aa11□□□□□ -0.65
SNRPB-201ENST00000381342 DNAJC30Q96LL9 226 aa11□□□□□ -0.65
SNRPB-201ENST00000381342 NIT2Q9NQR4 276 aa11□□□□□ -0.65
SNRPB-201ENST00000381342 A0A1B0GW15 77 aa10.99□□□□□ -0.65
SNRPB-201ENST00000381342 GAS8-AS1O95177 125 aa10.99□□□□□ -0.65
SNRPB-201ENST00000381342 DNAH10OSP0CZ25 163 aa10.99□□□□□ -0.65
SNRPB-201ENST00000381342 RAB4AP20338 218 aa10.99□□□□□ -0.65
SNRPB-201ENST00000381342 NCR2O95944 276 aa10.98□□□□□ -0.65
SNRPB-201ENST00000381342 S100PP25815 95 aa10.98□□□□□ -0.65
SNRPB-201ENST00000381342 KCNIP4Q6PIL6 250 aa10.98□□□□□ -0.65
SNRPB-201ENST00000381342 DAZ4Q86SG3 579 aaKnown RBP10.98□□□□□ -0.65
SNRPB-201ENST00000381342 Q8N3U1 123 aa10.98□□□□□ -0.65
SNRPB-201ENST00000381342 DAZ3Q9NR90 486 aaKnown RBP10.98□□□□□ -0.65
SNRPB-201ENST00000381342 TRAV9-1A0A075B6T8 112 aa10.97□□□□□ -0.65
SNRPB-201ENST00000381342 SMKR1H3BMG3 65 aa10.97□□□□□ -0.65
SNRPB-201ENST00000381342 IGHV3-30P01768 117 aa10.97□□□□□ -0.65
SNRPB-201ENST00000381342 IGHV3-33P01772 117 aa10.97□□□□□ -0.65
SNRPB-201ENST00000381342 IGHV3-30-3P0DP02 117 aa10.97□□□□□ -0.65
SNRPB-201ENST00000381342 IGHV3-30-5P0DP03 117 aa10.97□□□□□ -0.65
SNRPB-201ENST00000381342 ATP5L2Q7Z4Y8 100 aa10.97□□□□□ -0.65
SNRPB-201ENST00000381342 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.97□□□□□ -0.65
SNRPB-201ENST00000381342 YPEL4Q96NS1 127 aa10.97□□□□□ -0.65
SNRPB-201ENST00000381342 TRBV6-8A0A0A6YYG3 113 aa10.96□□□□□ -0.65
SNRPB-201ENST00000381342 A0A1B0GVY2 172 aa10.96□□□□□ -0.65
SNRPB-201ENST00000381342 S100A8P05109 93 aa10.96□□□□□ -0.65
SNRPB-201ENST00000381342 LINC01556Q5JQF7 62 aa10.96□□□□□ -0.65
SNRPB-201ENST00000381342 FAM104BQ5XKR9 115 aa10.96□□□□□ -0.65
SNRPB-201ENST00000381342 NTM-AS1Q6ZSK4 140 aa10.96□□□□□ -0.65
SNRPB-201ENST00000381342 DEFB104AQ8WTQ1 72 aa10.96□□□□□ -0.65
SNRPB-201ENST00000381342 FRZBQ92765 325 aa10.96□□□□□ -0.65
SNRPB-201ENST00000381342 MRAP2Q96G30 205 aa10.96□□□□□ -0.65
SNRPB-201ENST00000381342 RPS10P46783 165 aaKnown RBP10.95□□□□□ -0.66
SNRPB-201ENST00000381342 ELOBQ15370 118 aa10.95□□□□□ -0.66
SNRPB-201ENST00000381342 MRPL51Q4U2R6 128 aaKnown RBP10.95□□□□□ -0.66
SNRPB-201ENST00000381342 BTF3L4Q96K17 158 aa10.95□□□□□ -0.66
SNRPB-201ENST00000381342 URGCP-MRPS24S4R325 110 aa10.95□□□□□ -0.66
SNRPB-201ENST00000381342 DNAH17Q9UFH2 4485 aa10.94□□□□□ -0.66
SNRPB-201ENST00000381342 TRBV24-1A0A075B6N3 115 aa10.94□□□□□ -0.66
SNRPB-201ENST00000381342 BTF3P20290 206 aaKnown RBP10.94□□□□□ -0.66
SNRPB-201ENST00000381342 TRAV9-2A0A087WT02 112 aa10.93□□□□□ -0.66
SNRPB-201ENST00000381342 TRBV6-5A0A0K0K1A5 114 aa10.93□□□□□ -0.66
SNRPB-201ENST00000381342 TMEM97Q5BJF2 176 aa10.93□□□□□ -0.66
SNRPB-201ENST00000381342 NIT1Q86X76 327 aa10.93□□□□□ -0.66
SNRPB-201ENST00000381342 FAT2Q9NYQ8 4349 aa10.92□□□□□ -0.66
SNRPB-201ENST00000381342 TRBV25-1A0A075B6N4 114 aa10.92□□□□□ -0.66
SNRPB-201ENST00000381342 SDHAF1A6NFY7 115 aa10.92□□□□□ -0.66
SNRPB-201ENST00000381342 COTL1Q14019 142 aa10.92□□□□□ -0.66
SNRPB-201ENST00000381342 C10orf126Q8N4M7 172 aa10.92□□□□□ -0.66
SNRPB-201ENST00000381342 CHCHD5Q9BSY4 110 aa10.92□□□□□ -0.66
SNRPB-201ENST00000381342 ST20Q9HBF5 79 aa10.92□□□□□ -0.66
SNRPB-201ENST00000381342 IGHV1-24A0A0C4DH33 117 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms