RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 NUDT3O95989 172 aa12.47□□□□□ -0.41
THUMPD2-201ENST00000378727 ORMDL2Q53FV1 153 aa12.47□□□□□ -0.41
THUMPD2-201ENST00000378727 SHISA2Q6UWI4 295 aa12.47□□□□□ -0.41
THUMPD2-201ENST00000378727 Q6ZTI0 123 aa12.47□□□□□ -0.41
THUMPD2-201ENST00000378727 PMCHL2Q9BQD1 86 aa12.47□□□□□ -0.41
THUMPD2-201ENST00000378727 TRBV27A0A0K0K1C4 114 aa12.47□□□□□ -0.41
THUMPD2-201ENST00000378727 VCYO14598 125 aa12.47□□□□□ -0.41
THUMPD2-201ENST00000378727 P0DMU3 169 aa12.47□□□□□ -0.41
THUMPD2-201ENST00000378727 FAM231AP0DMU4 169 aa12.47□□□□□ -0.41
THUMPD2-201ENST00000378727 FAM231CP0DMU5 169 aa12.47□□□□□ -0.41
THUMPD2-201ENST00000378727 DAZ2Q13117 558 aaKnown RBP12.47□□□□□ -0.41
THUMPD2-201ENST00000378727 RRN3P1Q2M238 152 aa12.47□□□□□ -0.41
THUMPD2-201ENST00000378727 DEFB104AQ8WTQ1 72 aa12.47□□□□□ -0.41
THUMPD2-201ENST00000378727 NOP10Q9NPE3 64 aaKnown RBP12.47□□□□□ -0.41
THUMPD2-201ENST00000378727 C20orf202A1L168 122 aa12.46□□□□□ -0.41
THUMPD2-201ENST00000378727 RHODO00212 210 aa12.46□□□□□ -0.42
THUMPD2-201ENST00000378727 C12orf54Q6X4T0 127 aa12.46□□□□□ -0.42
THUMPD2-201ENST00000378727 Q9UF83 564 aa12.46□□□□□ -0.42
THUMPD2-201ENST00000378727 H7C1H1 209 aa12.45□□□□□ -0.42
THUMPD2-201ENST00000378727 LGALS9BQ3B8N2 356 aa12.45□□□□□ -0.42
THUMPD2-201ENST00000378727 TRAV9-2A0A087WT02 112 aa12.44□□□□□ -0.42
THUMPD2-201ENST00000378727 IGHV3-53P01767 116 aa12.44□□□□□ -0.42
THUMPD2-201ENST00000378727 SPATA45Q537H7 98 aa12.44□□□□□ -0.42
THUMPD2-201ENST00000378727 OXLD1Q5BKU9 147 aa12.44□□□□□ -0.42
THUMPD2-201ENST00000378727 ZFP2Q6ZN57 461 aa12.44□□□□□ -0.42
THUMPD2-201ENST00000378727 TOMM6Q96B49 74 aa12.44□□□□□ -0.42
THUMPD2-201ENST00000378727 DDTP30046 118 aa12.43□□□□□ -0.42
THUMPD2-201ENST00000378727 OR4C5Q8NGB2 326 aa12.43□□□□□ -0.42
THUMPD2-201ENST00000378727 KIR2DL4Q99706 377 aa12.43□□□□□ -0.42
THUMPD2-201ENST00000378727 OVOL2Q9BRP0 275 aa12.43□□□□□ -0.42
THUMPD2-201ENST00000378727 LGALS9CQ6DKI2 356 aa12.42□□□□□ -0.42
THUMPD2-201ENST00000378727 C2orf66Q6UXQ4 117 aa12.42□□□□□ -0.42
THUMPD2-201ENST00000378727 ZNF479Q96JC4 524 aa12.42□□□□□ -0.42
THUMPD2-201ENST00000378727 ATP5LO75964 103 aa12.42□□□□□ -0.42
THUMPD2-201ENST00000378727 X6R8D5 127 aa12.42□□□□□ -0.42
THUMPD2-201ENST00000378727 KIR2DL5BQ8NHK3 375 aa12.41□□□□□ -0.42
THUMPD2-201ENST00000378727 hDV102S1A0JD36 115 aa12.41□□□□□ -0.42
THUMPD2-201ENST00000378727 TSHBP01222 138 aa12.41□□□□□ -0.42
THUMPD2-201ENST00000378727 NEXN-AS1Q8NBZ9 246 aa12.41□□□□□ -0.42
THUMPD2-201ENST00000378727 TRAV4A0A0B4J268 109 aa12.4□□□□□ -0.42
THUMPD2-201ENST00000378727 PRSS1P07477 247 aa12.4□□□□□ -0.42
THUMPD2-201ENST00000378727 GAGE12BA1L429 117 aa12.39□□□□□ -0.43
THUMPD2-201ENST00000378727 I3L3M4 83 aa12.39□□□□□ -0.43
THUMPD2-201ENST00000378727 GAGE7O76087 117 aa12.39□□□□□ -0.43
THUMPD2-201ENST00000378727 GAGE12FP0CL80 117 aa12.39□□□□□ -0.43
THUMPD2-201ENST00000378727 GAGE12GP0CL81 117 aa12.39□□□□□ -0.43
THUMPD2-201ENST00000378727 GAGE12IP0CL82 117 aa12.39□□□□□ -0.43
THUMPD2-201ENST00000378727 RIPPLY3P57055 190 aa12.39□□□□□ -0.43
THUMPD2-201ENST00000378727 KRTAP10-11P60412 298 aa12.39□□□□□ -0.43
THUMPD2-201ENST00000378727 SCGB3A1Q96QR1 104 aa12.39□□□□□ -0.43
THUMPD2-201ENST00000378727 DKK2Q9UBU2 259 aa12.39□□□□□ -0.43
THUMPD2-201ENST00000378727 APOC4P55056 127 aa12.39□□□□□ -0.43
THUMPD2-201ENST00000378727 ODF1Q14990 250 aa12.39□□□□□ -0.43
THUMPD2-201ENST00000378727 TNFRSF18Q9Y5U5 241 aa12.39□□□□□ -0.43
THUMPD2-201ENST00000378727 COL6A5A8TX70 2615 aa12.38□□□□□ -0.43
THUMPD2-201ENST00000378727 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.38□□□□□ -0.43
THUMPD2-201ENST00000378727 IGHV4-30-4P0DP06 118 aa12.38□□□□□ -0.43
THUMPD2-201ENST00000378727 EMP1P54849 157 aa12.38□□□□□ -0.43
THUMPD2-201ENST00000378727 DEFB135Q30KP9 77 aa12.38□□□□□ -0.43
THUMPD2-201ENST00000378727 CYSLTR1Q9Y271 337 aa12.38□□□□□ -0.43
THUMPD2-201ENST00000378727 RPL39P62891 51 aaKnown RBP12.38□□□□□ -0.43
THUMPD2-201ENST00000378727 TP53TG1Q9Y2A0 90 aa12.38□□□□□ -0.43
THUMPD2-201ENST00000378727 RHOHQ15669 191 aa12.37□□□□□ -0.43
THUMPD2-201ENST00000378727 ERASQ7Z444 233 aa12.37□□□□□ -0.43
THUMPD2-201ENST00000378727 PKD1L1Q8TDX9 2849 aa12.37□□□□□ -0.43
THUMPD2-201ENST00000378727 NBEAL2Q6ZNJ1 2754 aa12.37□□□□□ -0.43
THUMPD2-201ENST00000378727 TRGV2A0A075B6R0 118 aa12.36□□□□□ -0.43
THUMPD2-201ENST00000378727 SMIM9A6NGZ8 99 aa12.36□□□□□ -0.43
THUMPD2-201ENST00000378727 IGLC3P0DOY3 106 aa12.36□□□□□ -0.43
THUMPD2-201ENST00000378727 EGFEM1PQ0D2K5 195 aa12.36□□□□□ -0.43
THUMPD2-201ENST00000378727 DNAJC30Q96LL9 226 aa12.36□□□□□ -0.43
THUMPD2-201ENST00000378727 MIEN1Q9BRT3 115 aa12.36□□□□□ -0.43
THUMPD2-201ENST00000378727 CMYA5Q8N3K9 4069 aa12.36□□□□□ -0.43
THUMPD2-201ENST00000378727 IGIPA6NJ69 53 aa12.36□□□□□ -0.43
THUMPD2-201ENST00000378727 G0S2P27469 103 aa12.36□□□□□ -0.43
THUMPD2-201ENST00000378727 ZMAT4Q9H898 229 aa12.36□□□□□ -0.43
THUMPD2-201ENST00000378727 Q6ZN92 141 aa12.35□□□□□ -0.43
THUMPD2-201ENST00000378727 A0A087WX48 190 aa12.34□□□□□ -0.43
THUMPD2-201ENST00000378727 K7EQD1 137 aa12.34□□□□□ -0.43
THUMPD2-201ENST00000378727 LINC00612Q8N6U2 182 aa12.34□□□□□ -0.43
THUMPD2-201ENST00000378727 SLC25A29Q8N8R3 303 aa12.34□□□□□ -0.43
THUMPD2-201ENST00000378727 C20orf203Q8NBC4 194 aa12.34□□□□□ -0.43
THUMPD2-201ENST00000378727 BAALCQ8WXS3 180 aa12.34□□□□□ -0.43
THUMPD2-201ENST00000378727 C14orf144Q96I85 54 aa12.34□□□□□ -0.43
THUMPD2-201ENST00000378727 LINC01549A6NIU2 74 aa12.33□□□□□ -0.44
THUMPD2-201ENST00000378727 HSBP1L1C9JCN9 74 aa12.33□□□□□ -0.44
THUMPD2-201ENST00000378727 TRAV12-1A0A0B4J245 112 aa12.33□□□□□ -0.44
THUMPD2-201ENST00000378727 OR11H2Q8NH07 326 aa12.33□□□□□ -0.44
THUMPD2-201ENST00000378727 MRPL35Q9NZE8 188 aaKnown RBP12.33□□□□□ -0.44
THUMPD2-201ENST00000378727 IGHV3-38A0A0C4DH36 116 aa12.32□□□□□ -0.44
THUMPD2-201ENST00000378727 STPG4Q8N801 248 aa12.32□□□□□ -0.44
THUMPD2-201ENST00000378727 ZNRF2Q8NHG8 242 aa12.32□□□□□ -0.44
THUMPD2-201ENST00000378727 PHLDA1Q8WV24 401 aaPredicted RBP12.32□□□□□ -0.44
THUMPD2-201ENST00000378727 TRBV10-1A0A0K0K1A3 114 aa12.31□□□□□ -0.44
THUMPD2-201ENST00000378727 TIMM17AQ99595 171 aa12.31□□□□□ -0.44
THUMPD2-201ENST00000378727 UQCR10Q9UDW1 63 aa12.31□□□□□ -0.44
THUMPD2-201ENST00000378727 TRBV7-3A0A075B6L6 115 aa12.31□□□□□ -0.44
THUMPD2-201ENST00000378727 CIDEAO60543 219 aa12.31□□□□□ -0.44
THUMPD2-201ENST00000378727 DEFB130BP0DP73 79 aa12.31□□□□□ -0.44
THUMPD2-201ENST00000378727 DEFB130AP0DP74 79 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms