RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 DPH3P1Q9H4G8 78 aa8.09□□□□□ -1.11
DEPDC4-202ENST00000378244 TRAV26-2A0A0B4J265 109 aa8.08□□□□□ -1.12
DEPDC4-202ENST00000378244 RAB4BP61018 213 aa8.08□□□□□ -1.12
DEPDC4-202ENST00000378244 MRPL54Q6P161 138 aaKnown RBP8.08□□□□□ -1.12
DEPDC4-202ENST00000378244 SMIM15Q7Z3B0 74 aa8.08□□□□□ -1.12
DEPDC4-202ENST00000378244 SUMO4Q6EEV6 95 aa8.08□□□□□ -1.12
DEPDC4-202ENST00000378244 ATP6V0E2Q8NHE4 81 aa8.08□□□□□ -1.12
DEPDC4-202ENST00000378244 C1orf43Q9BWL3 253 aa8.08□□□□□ -1.12
DEPDC4-202ENST00000378244 APOC3P02656 99 aa8.07□□□□□ -1.12
DEPDC4-202ENST00000378244 DEFB104AQ8WTQ1 72 aa8.07□□□□□ -1.12
DEPDC4-202ENST00000378244 IGHV3-38A0A0C4DH36 116 aa8.07□□□□□ -1.12
DEPDC4-202ENST00000378244 PPP1R2P9O14990 202 aa8.07□□□□□ -1.12
DEPDC4-202ENST00000378244 RYR2Q92736 4967 aa8.06□□□□□ -1.12
DEPDC4-202ENST00000378244 M0QY20 66 aa8.06□□□□□ -1.12
DEPDC4-202ENST00000378244 RPL36AP83881 106 aaKnown RBP8.06□□□□□ -1.12
DEPDC4-202ENST00000378244 RIGQ13278 110 aa8.06□□□□□ -1.12
DEPDC4-202ENST00000378244 NEXN-AS1Q8NBZ9 246 aa8.06□□□□□ -1.12
DEPDC4-202ENST00000378244 RPL36ALQ969Q0 106 aaKnown RBP8.06□□□□□ -1.12
DEPDC4-202ENST00000378244 Q9H8V8 135 aa8.06□□□□□ -1.12
DEPDC4-202ENST00000378244 TRBV7-3A0A075B6L6 115 aa8.06□□□□□ -1.12
DEPDC4-202ENST00000378244 AMN1Q8IY45 258 aa8.06□□□□□ -1.12
DEPDC4-202ENST00000378244 DNAH1Q9P2D7 4330 aa8.05□□□□□ -1.12
DEPDC4-202ENST00000378244 TRBV10-1A0A0K0K1A3 114 aa8.04□□□□□ -1.12
DEPDC4-202ENST00000378244 GAS8-AS1O95177 125 aa8.04□□□□□ -1.12
DEPDC4-202ENST00000378244 C10orf91Q5T1B1 145 aa8.04□□□□□ -1.12
DEPDC4-202ENST00000378244 WFDC10BQ8IUB3 73 aa8.04□□□□□ -1.12
DEPDC4-202ENST00000378244 GTSF1LQ9H1H1 148 aa8.04□□□□□ -1.12
DEPDC4-202ENST00000378244 CARHSP1Q9Y2V2 147 aaKnown RBP8.04□□□□□ -1.12
DEPDC4-202ENST00000378244 MRPS16Q9Y3D3 137 aaKnown RBP8.04□□□□□ -1.12
DEPDC4-202ENST00000378244 URGCP-MRPS24S4R325 110 aa8.04□□□□□ -1.12
DEPDC4-202ENST00000378244 C7orf77A4D0Y5 90 aa8.04□□□□□ -1.12
DEPDC4-202ENST00000378244 OR10J3Q5JRS4 329 aa8.04□□□□□ -1.12
DEPDC4-202ENST00000378244 SH2D6Q7Z4S9 175 aa8.04□□□□□ -1.12
DEPDC4-202ENST00000378244 GATD1Q8NB37 220 aa8.04□□□□□ -1.12
DEPDC4-202ENST00000378244 TMEM191AQ9H0A3 160 aa8.04□□□□□ -1.12
DEPDC4-202ENST00000378244 RPS10P5Q9NQ39 176 aa8.04□□□□□ -1.12
DEPDC4-202ENST00000378244 TNFRSF18Q9Y5U5 241 aa8.04□□□□□ -1.12
DEPDC4-202ENST00000378244 H7C1H1 209 aa8.03□□□□□ -1.12
DEPDC4-202ENST00000378244 RASL11AQ6T310 242 aa8.03□□□□□ -1.12
DEPDC4-202ENST00000378244 RPL39LQ96EH5 51 aaKnown RBP8.03□□□□□ -1.12
DEPDC4-202ENST00000378244 VPS13DQ5THJ4 4388 aa8.03□□□□□ -1.12
DEPDC4-202ENST00000378244 SIVA1O15304 175 aa8.03□□□□□ -1.12
DEPDC4-202ENST00000378244 LINC00694P0DN24 101 aa8.03□□□□□ -1.12
DEPDC4-202ENST00000378244 UBE2D3P61077 147 aa8.03□□□□□ -1.12
DEPDC4-202ENST00000378244 UBE2D2P62837 147 aa8.03□□□□□ -1.12
DEPDC4-202ENST00000378244 ALMS1Q8TCU4 4167 aa8.03□□□□□ -1.12
DEPDC4-202ENST00000378244 SMKR1H3BMG3 65 aa8.02□□□□□ -1.13
DEPDC4-202ENST00000378244 RAB4AP20338 218 aa8.02□□□□□ -1.13
DEPDC4-202ENST00000378244 HBBP68871 147 aa8.02□□□□□ -1.13
DEPDC4-202ENST00000378244 NDUFA5Q16718 116 aa8.02□□□□□ -1.13
DEPDC4-202ENST00000378244 NIT2Q9NQR4 276 aa8.02□□□□□ -1.13
DEPDC4-202ENST00000378244 NCR2O95944 276 aa8.02□□□□□ -1.13
DEPDC4-202ENST00000378244 RNF185Q96GF1 192 aa8.02□□□□□ -1.13
DEPDC4-202ENST00000378244 UPK3BQ9BT76 320 aa8.01□□□□□ -1.13
DEPDC4-202ENST00000378244 CTDSP1Q9GZU7 261 aa8.01□□□□□ -1.13
DEPDC4-202ENST00000378244 RPS10P46783 165 aaKnown RBP8.01□□□□□ -1.13
DEPDC4-202ENST00000378244 Q8N3U1 123 aa8.01□□□□□ -1.13
DEPDC4-202ENST00000378244 KRTAP1-5Q9BYS1 174 aa8.01□□□□□ -1.13
DEPDC4-202ENST00000378244 TRAV8-6A0A0B4J262 113 aa8□□□□□ -1.13
DEPDC4-202ENST00000378244 NBDYA0A0U1RRE5 68 aa8□□□□□ -1.13
DEPDC4-202ENST00000378244 A0A1B0GXF2 115 aa8□□□□□ -1.13
DEPDC4-202ENST00000378244 H0Y8G0 127 aa8□□□□□ -1.13
DEPDC4-202ENST00000378244 LELP1Q5T871 98 aa8□□□□□ -1.13
DEPDC4-202ENST00000378244 FAM104BQ5XKR9 115 aa8□□□□□ -1.13
DEPDC4-202ENST00000378244 SVBPQ8N300 66 aa8□□□□□ -1.13
DEPDC4-202ENST00000378244 SREK1IP1Q8N9Q2 155 aaPredicted RBP8□□□□□ -1.13
DEPDC4-202ENST00000378244 RHEBQ15382 184 aa8□□□□□ -1.13
DEPDC4-202ENST00000378244 KCNIP4Q6PIL6 250 aa8□□□□□ -1.13
DEPDC4-202ENST00000378244 BTF3L4Q96K17 158 aa8□□□□□ -1.13
DEPDC4-202ENST00000378244 A0A1B0GW15 77 aa7.99□□□□□ -1.13
DEPDC4-202ENST00000378244 SNAPINO95295 136 aa7.99□□□□□ -1.13
DEPDC4-202ENST00000378244 IGHV3-30P01768 117 aa7.99□□□□□ -1.13
DEPDC4-202ENST00000378244 IGHV3-33P01772 117 aa7.99□□□□□ -1.13
DEPDC4-202ENST00000378244 IGHV3-30-3P0DP02 117 aa7.99□□□□□ -1.13
DEPDC4-202ENST00000378244 IGHV3-30-5P0DP03 117 aa7.99□□□□□ -1.13
DEPDC4-202ENST00000378244 MRPL51Q4U2R6 128 aaKnown RBP7.99□□□□□ -1.13
DEPDC4-202ENST00000378244 VCX2Q9H322 139 aa7.99□□□□□ -1.13
DEPDC4-202ENST00000378244 F8WDY8 70 aa7.98□□□□□ -1.13
DEPDC4-202ENST00000378244 S100A8P05109 93 aa7.98□□□□□ -1.13
DEPDC4-202ENST00000378244 S100PP25815 95 aa7.98□□□□□ -1.13
DEPDC4-202ENST00000378244 NTM-AS1Q6ZSK4 140 aa7.98□□□□□ -1.13
DEPDC4-202ENST00000378244 ATP5L2Q7Z4Y8 100 aa7.98□□□□□ -1.13
DEPDC4-202ENST00000378244 DAZ4Q86SG3 579 aaKnown RBP7.98□□□□□ -1.13
DEPDC4-202ENST00000378244 DNAJC30Q96LL9 226 aa7.98□□□□□ -1.13
DEPDC4-202ENST00000378244 DAZ3Q9NR90 486 aaKnown RBP7.98□□□□□ -1.13
DEPDC4-202ENST00000378244 A0A087WWC5 75 aa7.98□□□□□ -1.13
DEPDC4-202ENST00000378244 TRBV6-8A0A0A6YYG3 113 aa7.98□□□□□ -1.13
DEPDC4-202ENST00000378244 SDHAF1A6NFY7 115 aa7.98□□□□□ -1.13
DEPDC4-202ENST00000378244 CKS2P33552 79 aa7.98□□□□□ -1.13
DEPDC4-202ENST00000378244 TIRAPP58753 221 aa7.98□□□□□ -1.13
DEPDC4-202ENST00000378244 TMEM262E9PQX1 116 aa7.97□□□□□ -1.13
DEPDC4-202ENST00000378244 ATRAIDQ6UW56 229 aa7.97□□□□□ -1.13
DEPDC4-202ENST00000378244 Q6ZR54 194 aa7.97□□□□□ -1.13
DEPDC4-202ENST00000378244 IMMP2LQ96T52 175 aa7.97□□□□□ -1.13
DEPDC4-202ENST00000378244 CHCHD5Q9BSY4 110 aa7.97□□□□□ -1.13
DEPDC4-202ENST00000378244 TMEM242Q9NWH2 141 aa7.97□□□□□ -1.13
DEPDC4-202ENST00000378244 D6R8Y8 96 aa7.97□□□□□ -1.13
DEPDC4-202ENST00000378244 MRAP2Q96G30 205 aa7.97□□□□□ -1.13
DEPDC4-202ENST00000378244 ST20Q9HBF5 79 aa7.96□□□□□ -1.13
DEPDC4-202ENST00000378244 DNAH10OSP0CZ25 163 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms