RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 HILS1P60008 231 aa12.5□□□□□ -0.41
RGP1-201ENST00000378078 RSPO1Q2MKA7 263 aaPredicted RBP12.5□□□□□ -0.41
RGP1-201ENST00000378078 MYCNOSP40205 109 aa12.5□□□□□ -0.41
RGP1-201ENST00000378078 MAP6D1Q9H9H5 199 aa12.5□□□□□ -0.41
RGP1-201ENST00000378078 PLXNA2O75051 1894 aa12.5□□□□□ -0.41
RGP1-201ENST00000378078 K7EIM0 57 aa12.5□□□□□ -0.41
RGP1-201ENST00000378078 EP300Q09472 2414 aaPredicted RBP12.5□□□□□ -0.41
RGP1-201ENST00000378078 IGKV2-28A0A075B6P5 120 aa12.49□□□□□ -0.41
RGP1-201ENST00000378078 IGKV2D-28P01615 120 aa12.49□□□□□ -0.41
RGP1-201ENST00000378078 SLX1AQ9BQ83 275 aa12.49□□□□□ -0.41
RGP1-201ENST00000378078 TNRC6AQ8NDV7 1962 aaKnown RBP12.49□□□□□ -0.41
RGP1-201ENST00000378078 FAM222AQ5U5X8 452 aa12.49□□□□□ -0.41
RGP1-201ENST00000378078 C3orf22Q8N5N4 141 aa12.49□□□□□ -0.41
RGP1-201ENST00000378078 CRYGBP07316 175 aa12.49□□□□□ -0.41
RGP1-201ENST00000378078 IGF2-ASQ6U949 168 aa12.49□□□□□ -0.41
RGP1-201ENST00000378078 C9orf85Q96MD7 179 aa12.49□□□□□ -0.41
RGP1-201ENST00000378078 ZNF747Q9BV97 191 aa12.49□□□□□ -0.41
RGP1-201ENST00000378078 PKDREJQ9NTG1 2253 aa12.48□□□□□ -0.41
RGP1-201ENST00000378078 REG3AQ06141 175 aa12.48□□□□□ -0.41
RGP1-201ENST00000378078 DENND4CQ5VZ89 1909 aa12.48□□□□□ -0.41
RGP1-201ENST00000378078 C19orf84I3L1E1 186 aa12.48□□□□□ -0.41
RGP1-201ENST00000378078 SIP14410 1827 aa12.48□□□□□ -0.41
RGP1-201ENST00000378078 Q6ZTI0 123 aa12.47□□□□□ -0.41
RGP1-201ENST00000378078 IGLV11-55A0A075B6I3 123 aa12.47□□□□□ -0.41
RGP1-201ENST00000378078 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.47□□□□□ -0.41
RGP1-201ENST00000378078 RPL37AP8A6NKH3 93 aa12.47□□□□□ -0.41
RGP1-201ENST00000378078 USP17L23D6RBM5 183 aa12.47□□□□□ -0.41
RGP1-201ENST00000378078 UPK3BQ9BT76 320 aa12.46□□□□□ -0.41
RGP1-201ENST00000378078 LINC01548A6NM66 108 aa12.46□□□□□ -0.41
RGP1-201ENST00000378078 WISP2O76076 250 aa12.46□□□□□ -0.41
RGP1-201ENST00000378078 X6R8D5 127 aa12.46□□□□□ -0.41
RGP1-201ENST00000378078 NCOA6Q14686 2063 aaPredicted RBP12.46□□□□□ -0.41
RGP1-201ENST00000378078 E7EUB6 86 aa12.46□□□□□ -0.41
RGP1-201ENST00000378078 KAAG1Q9UBP8 84 aa12.46□□□□□ -0.42
RGP1-201ENST00000378078 KIAA1549Q9HCM3 1950 aa12.45□□□□□ -0.42
RGP1-201ENST00000378078 NDUFC2O95298 119 aa12.45□□□□□ -0.42
RGP1-201ENST00000378078 C3orf84H3BNL1 204 aa12.45□□□□□ -0.42
RGP1-201ENST00000378078 C7orf33Q8WU49 177 aa12.45□□□□□ -0.42
RGP1-201ENST00000378078 XAGE1AQ9HD64 81 aa12.45□□□□□ -0.42
RGP1-201ENST00000378078 Q8N7P7 452 aa12.45□□□□□ -0.42
RGP1-201ENST00000378078 IL17DQ8TAD2 202 aa12.45□□□□□ -0.42
RGP1-201ENST00000378078 PLA2G5P39877 138 aa12.44□□□□□ -0.42
RGP1-201ENST00000378078 C20orf144Q9BQM9 153 aa12.44□□□□□ -0.42
RGP1-201ENST00000378078 A0A0U1RQV1 116 aa12.44□□□□□ -0.42
RGP1-201ENST00000378078 IGF1P05019 195 aa12.44□□□□□ -0.42
RGP1-201ENST00000378078 LINC01620Q4KN68 170 aa12.44□□□□□ -0.42
RGP1-201ENST00000378078 TRBV6-1A0A0K0K1D8 114 aa12.43□□□□□ -0.42
RGP1-201ENST00000378078 H0YGX0 51 aa12.43□□□□□ -0.42
RGP1-201ENST00000378078 WFDC2Q14508 124 aa12.43□□□□□ -0.42
RGP1-201ENST00000378078 PRO0255Q9UI72 69 aa12.43□□□□□ -0.42
RGP1-201ENST00000378078 TOMM6Q96B49 74 aa12.43□□□□□ -0.42
RGP1-201ENST00000378078 RNF152Q8N8N0 203 aa12.43□□□□□ -0.42
RGP1-201ENST00000378078 NDUFA11Q86Y39 141 aa12.42□□□□□ -0.42
RGP1-201ENST00000378078 LY6G6DO95868 133 aa12.42□□□□□ -0.42
RGP1-201ENST00000378078 SDIM1Q6ZPB5 146 aa12.42□□□□□ -0.42
RGP1-201ENST00000378078 C14orf177Q52M58 125 aa12.42□□□□□ -0.42
RGP1-201ENST00000378078 SMIM20Q8N5G0 67 aa12.42□□□□□ -0.42
RGP1-201ENST00000378078 CHCHD10Q8WYQ3 142 aaPredicted RBP12.42□□□□□ -0.42
RGP1-201ENST00000378078 TMEM256-PLSCR3K7ERE1 68 aa12.42□□□□□ -0.42
RGP1-201ENST00000378078 BPY2O14599 106 aa12.42□□□□□ -0.42
RGP1-201ENST00000378078 FXYD2P54710 66 aa12.42□□□□□ -0.42
RGP1-201ENST00000378078 TDRG1Q3Y452 100 aa12.41□□□□□ -0.42
RGP1-201ENST00000378078 C1orf158Q8N1D5 194 aa12.41□□□□□ -0.42
RGP1-201ENST00000378078 TANC1Q9C0D5 1861 aa12.41□□□□□ -0.42
RGP1-201ENST00000378078 PTH2Q96A98 100 aa12.41□□□□□ -0.42
RGP1-201ENST00000378078 NUPR1O60356 82 aa12.41□□□□□ -0.42
RGP1-201ENST00000378078 PROK1P58294 105 aa12.4□□□□□ -0.42
RGP1-201ENST00000378078 PRR4Q16378 134 aa12.4□□□□□ -0.42
RGP1-201ENST00000378078 PATE2Q6UY27 113 aa12.4□□□□□ -0.42
RGP1-201ENST00000378078 C10orf99Q6UWK7 81 aa12.4□□□□□ -0.42
RGP1-201ENST00000378078 C22orf34Q6ZV56 151 aa12.4□□□□□ -0.43
RGP1-201ENST00000378078 C11orf86A6NJI1 115 aa12.39□□□□□ -0.43
RGP1-201ENST00000378078 SIVA1O15304 175 aa12.39□□□□□ -0.43
RGP1-201ENST00000378078 PLXNB3Q9ULL4 1909 aa12.39□□□□□ -0.43
RGP1-201ENST00000378078 C1orf147Q96MC9 270 aaPredicted RBP12.39□□□□□ -0.43
RGP1-201ENST00000378078 WFDC10AQ9H1F0 79 aa12.39□□□□□ -0.43
RGP1-201ENST00000378078 ZFAND2AQ8N6M9 145 aa12.39□□□□□ -0.43
RGP1-201ENST00000378078 PRM2P04554 102 aa12.39□□□□□ -0.43
RGP1-201ENST00000378078 MED13Q9UHV7 2174 aa12.39□□□□□ -0.43
RGP1-201ENST00000378078 PCNX1Q96RV3 2341 aa12.38□□□□□ -0.43
RGP1-201ENST00000378078 UBE2D2P62837 147 aa12.38□□□□□ -0.43
RGP1-201ENST00000378078 LINC00467Q9BRT7 94 aa12.38□□□□□ -0.43
RGP1-201ENST00000378078 NUP210Q8TEM1 1887 aaPredicted RBP12.38□□□□□ -0.43
RGP1-201ENST00000378078 TRBV10-1A0A0K0K1A3 114 aa12.38□□□□□ -0.43
RGP1-201ENST00000378078 ROS1P08922 2347 aa12.37□□□□□ -0.43
RGP1-201ENST00000378078 TNCP24821 2201 aa12.37□□□□□ -0.43
RGP1-201ENST00000378078 K7ERS5 55 aa12.37□□□□□ -0.43
RGP1-201ENST00000378078 C18orf65Q6ZTR6 163 aa12.37□□□□□ -0.43
RGP1-201ENST00000378078 NOTCH4Q99466 2003 aa12.37□□□□□ -0.43
RGP1-201ENST00000378078 SMR3AQ99954 134 aa12.37□□□□□ -0.43
RGP1-201ENST00000378078 ATOX1O00244 68 aa12.36□□□□□ -0.43
RGP1-201ENST00000378078 IGLV2-8P01709 118 aa12.36□□□□□ -0.43
RGP1-201ENST00000378078 PIK3CD-AS1Q5SR53 167 aa12.36□□□□□ -0.43
RGP1-201ENST00000378078 NCOR1P1Q9H4R4 102 aa12.36□□□□□ -0.43
RGP1-201ENST00000378078 NANOS2P60321 138 aaKnown RBP12.35□□□□□ -0.43
RGP1-201ENST00000378078 ENHOQ6UWT2 76 aa12.35□□□□□ -0.43
RGP1-201ENST00000378078 WFDC13Q8IUB5 93 aa12.35□□□□□ -0.43
RGP1-201ENST00000378078 CNOT1A5YKK6 2376 aaKnown RBP12.35□□□□□ -0.43
RGP1-201ENST00000378078 ACACAQ13085 2346 aa12.35□□□□□ -0.43
RGP1-201ENST00000378078 POM121L12Q8N7R1 296 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms