RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 IGKV1D-37A0A075B6S9 117 aa13.01□□□□□ -0.33
MCF2L-203ENST00000375604 A0A0J9YX75 114 aa13.01□□□□□ -0.33
MCF2L-203ENST00000375604 LOXL1Q08397 574 aaPredicted RBP13.01□□□□□ -0.33
MCF2L-203ENST00000375604 NFE4Q86UQ8 179 aa13.01□□□□□ -0.33
MCF2L-203ENST00000375604 ZFHX2Q9C0A1 2572 aaPredicted RBP13.01□□□□□ -0.33
MCF2L-203ENST00000375604 K7EMT4 169 aa13□□□□□ -0.33
MCF2L-203ENST00000375604 SIVA1O15304 175 aa13□□□□□ -0.33
MCF2L-203ENST00000375604 NBASA2RRP1 2371 aa13□□□□□ -0.33
MCF2L-203ENST00000375604 Q6YL49 198 aa13□□□□□ -0.33
MCF2L-203ENST00000375604 TMEM263Q8WUH6 116 aaKnown RBP13□□□□□ -0.33
MCF2L-203ENST00000375604 SPATA25Q9BR10 227 aa13□□□□□ -0.33
MCF2L-203ENST00000375604 LYPD6Q86Y78 171 aa13□□□□□ -0.33
MCF2L-203ENST00000375604 PRSS47A8MTI9 375 aa13□□□□□ -0.33
MCF2L-203ENST00000375604 MIR7-3HGQ8N6C7 128 aa13□□□□□ -0.33
MCF2L-203ENST00000375604 LY6G6DO95868 133 aa12.99□□□□□ -0.33
MCF2L-203ENST00000375604 Q6ZPA2 131 aa12.99□□□□□ -0.33
MCF2L-203ENST00000375604 FXYD2P54710 66 aa12.99□□□□□ -0.33
MCF2L-203ENST00000375604 C11orf86A6NJI1 115 aa12.99□□□□□ -0.33
MCF2L-203ENST00000375604 GDF5OSQ5U4N7 250 aa12.99□□□□□ -0.33
MCF2L-203ENST00000375604 LINC00322Q6ZN03 302 aaPredicted RBP12.99□□□□□ -0.33
MCF2L-203ENST00000375604 C5orf47Q569G3 176 aa12.99□□□□□ -0.33
MCF2L-203ENST00000375604 CITED1Q99966 193 aa12.99□□□□□ -0.33
MCF2L-203ENST00000375604 PRM2P04554 102 aa12.98□□□□□ -0.33
MCF2L-203ENST00000375604 PROK1P58294 105 aa12.98□□□□□ -0.33
MCF2L-203ENST00000375604 M0R2N4 97 aa12.98□□□□□ -0.33
MCF2L-203ENST00000375604 FAM222AQ5U5X8 452 aa12.98□□□□□ -0.33
MCF2L-203ENST00000375604 ODF3BA8MYP8 253 aa12.98□□□□□ -0.33
MCF2L-203ENST00000375604 NDUFA11Q86Y39 141 aa12.97□□□□□ -0.33
MCF2L-203ENST00000375604 LECT2O14960 151 aa12.97□□□□□ -0.33
MCF2L-203ENST00000375604 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.97□□□□□ -0.33
MCF2L-203ENST00000375604 SMR3AQ99954 134 aa12.97□□□□□ -0.33
MCF2L-203ENST00000375604 WFDC10AQ9H1F0 79 aa12.97□□□□□ -0.33
MCF2L-203ENST00000375604 FUSP35637 526 aaKnown RBP eCLIP12.96□□□□□ -0.339e-6■■■□□ 18.4
MCF2L-203ENST00000375604 PCNX2A6NKB5 2137 aa12.96□□□□□ -0.33
MCF2L-203ENST00000375604 IGLV2-18A0A075B6J9 118 aa12.96□□□□□ -0.33
MCF2L-203ENST00000375604 TRBV6-1A0A0K0K1D8 114 aa12.96□□□□□ -0.34
MCF2L-203ENST00000375604 TNFRSF13BO14836 293 aaPredicted RBP12.96□□□□□ -0.34
MCF2L-203ENST00000375604 BRWD1-AS2P59051 145 aa12.95□□□□□ -0.34
MCF2L-203ENST00000375604 ABCA1O95477 2261 aa12.95□□□□□ -0.34
MCF2L-203ENST00000375604 PCDH15Q96QU1 1955 aa12.94□□□□□ -0.34
MCF2L-203ENST00000375604 LINC01545Q5VT33 79 aa12.94□□□□□ -0.34
MCF2L-203ENST00000375604 PRO0255Q9UI72 69 aa12.93□□□□□ -0.34
MCF2L-203ENST00000375604 CHKB-CPT1BH3BT56 60 aa12.93□□□□□ -0.34
MCF2L-203ENST00000375604 RNF183Q96D59 192 aa12.93□□□□□ -0.34
MCF2L-203ENST00000375604 TECTAO75443 2155 aa12.93□□□□□ -0.34
MCF2L-203ENST00000375604 FBXL19-AS1Q494R0 122 aa12.93□□□□□ -0.34
MCF2L-203ENST00000375604 LGALS9O00182 355 aa12.93□□□□□ -0.34
MCF2L-203ENST00000375604 RBM3P98179 157 aaKnown RBP12.93□□□□□ -0.34
MCF2L-203ENST00000375604 C4orf48Q5BLP8 95 aa12.93□□□□□ -0.34
MCF2L-203ENST00000375604 Q6ZS46 218 aa12.93□□□□□ -0.34
MCF2L-203ENST00000375604 H0Y9J4 135 aa12.92□□□□□ -0.34
MCF2L-203ENST00000375604 CRYGDP07320 174 aa12.92□□□□□ -0.34
MCF2L-203ENST00000375604 IGKV2D-26A0A0A0MRZ7 120 aa12.92□□□□□ -0.34
MCF2L-203ENST00000375604 CDSNQ15517 529 aa12.92□□□□□ -0.34
MCF2L-203ENST00000375604 LINC00467Q9BRT7 94 aa12.92□□□□□ -0.34
MCF2L-203ENST00000375604 CTRLP40313 264 aa12.92□□□□□ -0.34
MCF2L-203ENST00000375604 TP73-AS1Q9UF72 201 aa12.92□□□□□ -0.34
MCF2L-203ENST00000375604 C14orf132Q9NPU4 83 aa12.91□□□□□ -0.34
MCF2L-203ENST00000375604 DEFB131BA0A096LNP1 70 aa12.91□□□□□ -0.34
MCF2L-203ENST00000375604 REG3AQ06141 175 aa12.91□□□□□ -0.34
MCF2L-203ENST00000375604 Q6ZSV7 163 aa12.91□□□□□ -0.34
MCF2L-203ENST00000375604 WFDC9Q8NEX5 89 aa12.91□□□□□ -0.34
MCF2L-203ENST00000375604 NREPQ16612 68 aa12.91□□□□□ -0.34
MCF2L-203ENST00000375604 DEFB114Q30KQ6 69 aa12.91□□□□□ -0.34
MCF2L-203ENST00000375604 WFDC2Q14508 124 aa12.9□□□□□ -0.34
MCF2L-203ENST00000375604 TANC2Q9HCD6 1990 aa12.9□□□□□ -0.34
MCF2L-203ENST00000375604 DIRC1Q969H9 104 aa12.89□□□□□ -0.35
MCF2L-203ENST00000375604 SS18L2Q9UHA2 77 aa12.89□□□□□ -0.35
MCF2L-203ENST00000375604 HIGD2AQ9BW72 106 aa12.89□□□□□ -0.35
MCF2L-203ENST00000375604 CEP192Q8TEP8 1941 aa12.89□□□□□ -0.35
MCF2L-203ENST00000375604 DCANP1Q8TF63 244 aa12.89□□□□□ -0.35
MCF2L-203ENST00000375604 LINC00526Q96FQ7 95 aa12.89□□□□□ -0.35
MCF2L-203ENST00000375604 NCOA6Q14686 2063 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-203ENST00000375604 ODF1Q14990 250 aa12.88□□□□□ -0.35
MCF2L-203ENST00000375604 FAM19A5Q7Z5A7 132 aaPredicted RBP12.88□□□□□ -0.35
MCF2L-203ENST00000375604 IGHV1-58A0A0C4DH39 117 aa12.88□□□□□ -0.35
MCF2L-203ENST00000375604 C19orf71A6NCJ1 209 aa12.88□□□□□ -0.35
MCF2L-203ENST00000375604 ZFAND2AQ8N6M9 145 aa12.88□□□□□ -0.35
MCF2L-203ENST00000375604 CRIP3Q6Q6R5 217 aa12.87□□□□□ -0.35
MCF2L-203ENST00000375604 SLPIP03973 132 aa12.87□□□□□ -0.35
MCF2L-203ENST00000375604 PTH2Q96A98 100 aa12.87□□□□□ -0.35
MCF2L-203ENST00000375604 TMEM89A2RUT3 159 aa12.87□□□□□ -0.35
MCF2L-203ENST00000375604 CHCHD10Q8WYQ3 142 aaPredicted RBP12.86□□□□□ -0.35
MCF2L-203ENST00000375604 LOC100131303A0A0U1RQF7 123 aa12.86□□□□□ -0.35
MCF2L-203ENST00000375604 E9PLD3 99 aa12.86□□□□□ -0.35
MCF2L-203ENST00000375604 MED13LQ71F56 2210 aa12.86□□□□□ -0.35
MCF2L-203ENST00000375604 C20orf203Q8NBC4 194 aa12.86□□□□□ -0.35
MCF2L-203ENST00000375604 INSL3P51460 131 aa12.86□□□□□ -0.35
MCF2L-203ENST00000375604 C11orf1Q9H5F2 150 aa12.85□□□□□ -0.35
MCF2L-203ENST00000375604 LRRC75A-AS1Q8N1F1 130 aa12.85□□□□□ -0.35
MCF2L-203ENST00000375604 A0A087WZ39 114 aa12.85□□□□□ -0.35
MCF2L-203ENST00000375604 NDUFB1O75438 58 aa12.85□□□□□ -0.35
MCF2L-203ENST00000375604 EDN2P20800 178 aa12.85□□□□□ -0.35
MCF2L-203ENST00000375604 PCNX3Q9H6A9 2034 aa12.85□□□□□ -0.35
MCF2L-203ENST00000375604 LINC01620Q4KN68 170 aa12.85□□□□□ -0.35
MCF2L-203ENST00000375604 ALPK3Q96L96 1907 aa12.84□□□□□ -0.35
MCF2L-203ENST00000375604 KIR2DL5BA0A0G2JN68 375 aa12.84□□□□□ -0.35
MCF2L-203ENST00000375604 KIR2DL5BA0A0G2JPC4 375 aa12.84□□□□□ -0.35
MCF2L-203ENST00000375604 HILS1P60008 231 aa12.84□□□□□ -0.35
MCF2L-203ENST00000375604 KIR2DL5AQ8N109 375 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms