RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 SMCR5Q8TEV8 140 aa15.37■□□□□ 0.05
TMEFF1-201ENST00000374879 LITAFQ99732 161 aa15.37■□□□□ 0.05
TMEFF1-201ENST00000374879 LINC00527Q9UJ94 153 aa15.37■□□□□ 0.05
TMEFF1-201ENST00000374879 ABCA4P78363 2273 aa15.37■□□□□ 0.05
TMEFF1-201ENST00000374879 SDHAF1A6NFY7 115 aa15.37■□□□□ 0.05
TMEFF1-201ENST00000374879 LY6HO94772 140 aa15.37■□□□□ 0.05
TMEFF1-201ENST00000374879 CLEC19AQ6UXS0 136 aa15.36■□□□□ 0.05
TMEFF1-201ENST00000374879 LINC00526Q96FQ7 95 aa15.36■□□□□ 0.05
TMEFF1-201ENST00000374879 TRAV8-3A0A0A6YYJ7 113 aa15.36■□□□□ 0.05
TMEFF1-201ENST00000374879 A0A0J9YX75 114 aa15.36■□□□□ 0.05
TMEFF1-201ENST00000374879 NBL1P41271 181 aa15.36■□□□□ 0.05
TMEFF1-201ENST00000374879 ADAMTSL4-AS1Q5T5F5 129 aa15.36■□□□□ 0.05
TMEFF1-201ENST00000374879 RNASE4P34096 147 aaKnown RBP15.35■□□□□ 0.05
TMEFF1-201ENST00000374879 NPC2P61916 151 aa15.35■□□□□ 0.05
TMEFF1-201ENST00000374879 A0A0J9YXV3 536 aa15.35■□□□□ 0.05
TMEFF1-201ENST00000374879 I3L3M4 83 aa15.35■□□□□ 0.05
TMEFF1-201ENST00000374879 J3KT08 172 aa15.35■□□□□ 0.05
TMEFF1-201ENST00000374879 LRRC75A-AS1Q8N1F1 130 aa15.35■□□□□ 0.05
TMEFF1-201ENST00000374879 LENEPQ9Y5L5 61 aa15.35■□□□□ 0.05
TMEFF1-201ENST00000374879 A0A087WWL8 130 aa15.34■□□□□ 0.05
TMEFF1-201ENST00000374879 K7ENP7 123 aa15.34■□□□□ 0.05
TMEFF1-201ENST00000374879 ZNF256Q9Y2P7 627 aaPredicted RBP15.34■□□□□ 0.05
TMEFF1-201ENST00000374879 ANKHD1Q8IWZ3 2542 aaKnown RBP15.34■□□□□ 0.05
TMEFF1-201ENST00000374879 F5H697 171 aa15.34■□□□□ 0.05
TMEFF1-201ENST00000374879 IGHV7-81A0A0B4J1V7 117 aa15.33■□□□□ 0.05
TMEFF1-201ENST00000374879 LY6G5BQ8NDX9 201 aa15.33■□□□□ 0.05
TMEFF1-201ENST00000374879 SPTA1P02549 2419 aa15.33■□□□□ 0.04
TMEFF1-201ENST00000374879 MED14OSP0DP75 135 aa15.32■□□□□ 0.04
TMEFF1-201ENST00000374879 LINC00477Q96M19 166 aa15.32■□□□□ 0.04
TMEFF1-201ENST00000374879 CCDC140Q96MF4 163 aa15.32■□□□□ 0.04
TMEFF1-201ENST00000374879 IGHV3-30-3P0DP02 117 aa15.32■□□□□ 0.04
TMEFF1-201ENST00000374879 VMO1Q7Z5L0 202 aa15.32■□□□□ 0.04
TMEFF1-201ENST00000374879 ITLN2Q8WWU7 325 aaPredicted RBP15.32■□□□□ 0.04
TMEFF1-201ENST00000374879 SPXQ9BT56 116 aa15.32■□□□□ 0.04
TMEFF1-201ENST00000374879 PTPRQQ9UMZ3 2332 aa15.32■□□□□ 0.04
TMEFF1-201ENST00000374879 TRBV27A0A0K0K1C4 114 aa15.31■□□□□ 0.04
TMEFF1-201ENST00000374879 IGHV1-69P01742 117 aa15.31■□□□□ 0.04
TMEFF1-201ENST00000374879 ECSCRQ19T08 205 aa15.31■□□□□ 0.04
TMEFF1-201ENST00000374879 PRRC2AP48634 2157 aaKnown RBP15.31■□□□□ 0.04
TMEFF1-201ENST00000374879 ACYP1P07311 99 aa15.3■□□□□ 0.04
TMEFF1-201ENST00000374879 EDA2RQ9HAV5 297 aa15.3■□□□□ 0.04
TMEFF1-201ENST00000374879 DUX5Q96PT3 197 aa15.3■□□□□ 0.04
TMEFF1-201ENST00000374879 A0A1B0GX51 115 aa15.3■□□□□ 0.04
TMEFF1-201ENST00000374879 CACNA1BQ00975 2339 aa15.29■□□□□ 0.04
TMEFF1-201ENST00000374879 LINC00643Q86TS7 51 aa15.29■□□□□ 0.04
TMEFF1-201ENST00000374879 CCL21O00585 134 aa15.28■□□□□ 0.04
TMEFF1-201ENST00000374879 NXPH4O95158 308 aa15.28■□□□□ 0.04
TMEFF1-201ENST00000374879 UBTD1Q9HAC8 227 aa15.28■□□□□ 0.04
TMEFF1-201ENST00000374879 TRAV41A0A0B4J266 112 aa15.28■□□□□ 0.04
TMEFF1-201ENST00000374879 CDSNQ15517 529 aa15.28■□□□□ 0.04
TMEFF1-201ENST00000374879 FBXL19-AS1Q494R0 122 aa15.28■□□□□ 0.04
TMEFF1-201ENST00000374879 DCANP1Q8TF63 244 aa15.28■□□□□ 0.04
TMEFF1-201ENST00000374879 COL12A1Q99715 3063 aa15.28■□□□□ 0.04
TMEFF1-201ENST00000374879 U3KQE9 123 aa15.28■□□□□ 0.04
TMEFF1-201ENST00000374879 F6UB75 175 aa15.27■□□□□ 0.04
TMEFF1-201ENST00000374879 COX7CP15954 63 aa15.27■□□□□ 0.04
TMEFF1-201ENST00000374879 C9orf139Q6ZV77 190 aa15.27■□□□□ 0.04
TMEFF1-201ENST00000374879 Q8N6K4 173 aa15.27■□□□□ 0.04
TMEFF1-201ENST00000374879 FAM110DQ8TAY7 271 aaPredicted RBP15.27■□□□□ 0.03
TMEFF1-201ENST00000374879 SPANXDQ9BXN6 97 aa15.27■□□□□ 0.03
TMEFF1-201ENST00000374879 SPANXCQ9NY87 97 aa15.27■□□□□ 0.03
TMEFF1-201ENST00000374879 GAGE2AQ6NT46 116 aa15.26■□□□□ 0.03
TMEFF1-201ENST00000374879 TMEM61Q8N0U2 210 aa15.26■□□□□ 0.03
TMEFF1-201ENST00000374879 TIMM21Q9BVV7 248 aa15.26■□□□□ 0.03
TMEFF1-201ENST00000374879 FAM74A4Q5TZK3 123 aa15.26■□□□□ 0.03
TMEFF1-201ENST00000374879 MIAQ16674 131 aa15.25■□□□□ 0.03
TMEFF1-201ENST00000374879 C2orf48Q96LS8 159 aa15.25■□□□□ 0.03
TMEFF1-201ENST00000374879 ATRXP46100 2492 aa15.25■□□□□ 0.03
TMEFF1-201ENST00000374879 ODF3BA8MYP8 253 aa15.25■□□□□ 0.03
TMEFF1-201ENST00000374879 IGLV4-3A0A075B6K6 122 aa15.24■□□□□ 0.03
TMEFF1-201ENST00000374879 A8MZ25 164 aa15.24■□□□□ 0.03
TMEFF1-201ENST00000374879 M0R1W7 72 aa15.24■□□□□ 0.03
TMEFF1-201ENST00000374879 NSUN5P1Q3KNT7 163 aa15.24■□□□□ 0.03
TMEFF1-201ENST00000374879 Q8N9W7 124 aa15.24■□□□□ 0.03
TMEFF1-201ENST00000374879 TRBV6-5A0A0K0K1A5 114 aa15.23■□□□□ 0.03
TMEFF1-201ENST00000374879 G3V318 75 aa15.23■□□□□ 0.03
TMEFF1-201ENST00000374879 ATP5G1P05496 136 aa15.23■□□□□ 0.03
TMEFF1-201ENST00000374879 FAM19A4Q96LR4 140 aa15.23■□□□□ 0.03
TMEFF1-201ENST00000374879 NDUFA12Q9UI09 145 aa15.23■□□□□ 0.03
TMEFF1-201ENST00000374879 OVOL1O14753 267 aa15.23■□□□□ 0.03
TMEFF1-201ENST00000374879 ATP6V0E1O15342 81 aa15.23■□□□□ 0.03
TMEFF1-201ENST00000374879 C5orf38Q86SI9 138 aa15.22■□□□□ 0.03
TMEFF1-201ENST00000374879 TMEM219Q86XT9 240 aa15.22■□□□□ 0.03
TMEFF1-201ENST00000374879 C20orf203Q8NBC4 194 aa15.22■□□□□ 0.03
TMEFF1-201ENST00000374879 CYSTM1Q9H1C7 97 aa15.22■□□□□ 0.03
TMEFF1-201ENST00000374879 CRYGAP11844 174 aa15.22■□□□□ 0.03
TMEFF1-201ENST00000374879 RPS28P62857 69 aaKnown RBP15.22■□□□□ 0.03
TMEFF1-201ENST00000374879 RPL11P62913 178 aaKnown RBP15.22■□□□□ 0.03
TMEFF1-201ENST00000374879 ZFHX3Q15911 3703 aa15.22■□□□□ 0.03
TMEFF1-201ENST00000374879 TRAV12-3A0A0B4J271 114 aa15.21■□□□□ 0.03
TMEFF1-201ENST00000374879 hADV29S1A0JD25 119 aa15.21■□□□□ 0.03
TMEFF1-201ENST00000374879 RHOHQ15669 191 aa15.21■□□□□ 0.03
TMEFF1-201ENST00000374879 TRAV25A0A0B4J276 109 aa15.21■□□□□ 0.03
TMEFF1-201ENST00000374879 WIPF1O43516 503 aa15.21■□□□□ 0.03
TMEFF1-201ENST00000374879 DAND5Q8N907 189 aa15.21■□□□□ 0.03
TMEFF1-201ENST00000374879 OR13C6PQ8NH95 151 aa15.21■□□□□ 0.03
TMEFF1-201ENST00000374879 IGF2RP11717 2491 aa15.21■□□□□ 0.02
TMEFF1-201ENST00000374879 ADORA2A-AS1P86434 159 aa15.2■□□□□ 0.02
TMEFF1-201ENST00000374879 SDIM1Q6ZPB5 146 aa15.2■□□□□ 0.02
TMEFF1-201ENST00000374879 APRG1Q8IVJ8 170 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms