RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 P0DMU3 169 aa8.14□□□□□ -1.11
CXCL12-203ENST00000374429 FAM231AP0DMU4 169 aa8.14□□□□□ -1.11
CXCL12-203ENST00000374429 FAM231CP0DMU5 169 aa8.14□□□□□ -1.11
CXCL12-203ENST00000374429 SLC25A16P16260 332 aa8.14□□□□□ -1.11
CXCL12-203ENST00000374429 XGP55808 180 aa8.14□□□□□ -1.11
CXCL12-203ENST00000374429 CHCHD1Q96BP2 118 aaKnown RBP8.14□□□□□ -1.11
CXCL12-203ENST00000374429 OPRPNQ99935 248 aaPredicted RBP8.13□□□□□ -1.11
CXCL12-203ENST00000374429 KLF5Q13887 457 aaPredicted RBP8.13□□□□□ -1.11
CXCL12-203ENST00000374429 IGKV3OR2-268A0A0C4DH90 116 aa8.13□□□□□ -1.11
CXCL12-203ENST00000374429 PROK1P58294 105 aa8.13□□□□□ -1.11
CXCL12-203ENST00000374429 Q6AWC8 147 aa8.13□□□□□ -1.11
CXCL12-203ENST00000374429 SCGB3A1Q96QR1 104 aa8.13□□□□□ -1.11
CXCL12-203ENST00000374429 RPL35AP18077 110 aaKnown RBP8.12□□□□□ -1.11
CXCL12-203ENST00000374429 RPL39P62891 51 aaKnown RBP8.12□□□□□ -1.11
CXCL12-203ENST00000374429 ZNF876PQ49A33 203 aa8.12□□□□□ -1.11
CXCL12-203ENST00000374429 PHLDA1Q8WV24 401 aaPredicted RBP8.12□□□□□ -1.11
CXCL12-203ENST00000374429 GAGE2BQ13066 116 aa8.12□□□□□ -1.11
CXCL12-203ENST00000374429 GAGE2EQ4V326 116 aa8.12□□□□□ -1.11
CXCL12-203ENST00000374429 MEIG1Q5JSS6 88 aa8.12□□□□□ -1.11
CXCL12-203ENST00000374429 WFDC10AQ9H1F0 79 aa8.12□□□□□ -1.11
CXCL12-203ENST00000374429 GAGE2DQ9UEU5 116 aa8.12□□□□□ -1.11
CXCL12-203ENST00000374429 TENM1Q9UKZ4 2725 aa8.12□□□□□ -1.11
CXCL12-203ENST00000374429 MRPL23Q16540 153 aaKnown RBP8.12□□□□□ -1.11
CXCL12-203ENST00000374429 ZFAND2AQ8N6M9 145 aa8.12□□□□□ -1.11
CXCL12-203ENST00000374429 RNF185Q96GF1 192 aa8.12□□□□□ -1.11
CXCL12-203ENST00000374429 LINC01587Q99440 93 aa8.12□□□□□ -1.11
CXCL12-203ENST00000374429 MRPL35Q9NZE8 188 aaKnown RBP8.12□□□□□ -1.11
CXCL12-203ENST00000374429 COL6A5A8TX70 2615 aa8.11□□□□□ -1.11
CXCL12-203ENST00000374429 TMEM61Q8N0U2 210 aa8.11□□□□□ -1.11
CXCL12-203ENST00000374429 DLX4Q92988 240 aaPredicted RBP8.11□□□□□ -1.11
CXCL12-203ENST00000374429 Q8N1Y9 231 aa8.11□□□□□ -1.11
CXCL12-203ENST00000374429 CITED2Q99967 270 aaPredicted RBP8.11□□□□□ -1.11
CXCL12-203ENST00000374429 FBN1P35555 2871 aaKnown RBP8.1□□□□□ -1.11
CXCL12-203ENST00000374429 A0A096LNJ9 63 aa8.1□□□□□ -1.11
CXCL12-203ENST00000374429 TRAV25A0A0B4J276 109 aa8.1□□□□□ -1.11
CXCL12-203ENST00000374429 IGLC6P0CF74 106 aa8.1□□□□□ -1.11
CXCL12-203ENST00000374429 PTH2Q96A98 100 aa8.1□□□□□ -1.11
CXCL12-203ENST00000374429 PDZD2O15018 2839 aa8.1□□□□□ -1.11
CXCL12-203ENST00000374429 OVOL1O14753 267 aa8.1□□□□□ -1.11
CXCL12-203ENST00000374429 TMEM170BQ5T4T1 132 aa8.09□□□□□ -1.11
CXCL12-203ENST00000374429 KIR2DL4Q99706 377 aa8.09□□□□□ -1.11
CXCL12-203ENST00000374429 TM2D2Q9BX73 214 aa8.09□□□□□ -1.11
CXCL12-203ENST00000374429 CSDC2Q9Y534 153 aaKnown RBP8.09□□□□□ -1.11
CXCL12-203ENST00000374429 IGKV2D-26A0A0A0MRZ7 120 aa8.09□□□□□ -1.11
CXCL12-203ENST00000374429 A0A0U1RRA0 63 aa8.09□□□□□ -1.11
CXCL12-203ENST00000374429 H7C2G1 150 aa8.09□□□□□ -1.11
CXCL12-203ENST00000374429 SNCGO76070 127 aa8.09□□□□□ -1.11
CXCL12-203ENST00000374429 PSMB8P28062 276 aa8.09□□□□□ -1.11
CXCL12-203ENST00000374429 FOXI1Q12951 378 aa8.09□□□□□ -1.11
CXCL12-203ENST00000374429 CEMP1Q6PRD7 247 aaPredicted RBP8.09□□□□□ -1.11
CXCL12-203ENST00000374429 SCGB1D4Q6XE38 83 aa8.09□□□□□ -1.11
CXCL12-203ENST00000374429 Q9UF83 564 aa8.09□□□□□ -1.11
CXCL12-203ENST00000374429 LAGE3Q14657 143 aa8.08□□□□□ -1.12
CXCL12-203ENST00000374429 GATD1Q8NB37 220 aa8.08□□□□□ -1.12
CXCL12-203ENST00000374429 CD28P10747 220 aa8.08□□□□□ -1.12
CXCL12-203ENST00000374429 PLA2G2AP14555 144 aa8.08□□□□□ -1.12
CXCL12-203ENST00000374429 FXYD2P54710 66 aa8.08□□□□□ -1.12
CXCL12-203ENST00000374429 SUMO2P61956 95 aaKnown RBP8.08□□□□□ -1.12
CXCL12-203ENST00000374429 LINC01559Q495D7 138 aa8.08□□□□□ -1.12
CXCL12-203ENST00000374429 C9orf47Q6ZRZ4 202 aa8.08□□□□□ -1.12
CXCL12-203ENST00000374429 OR9G4Q8NGQ1 327 aa8.08□□□□□ -1.12
CXCL12-203ENST00000374429 CDIP1Q9H305 208 aa8.08□□□□□ -1.12
CXCL12-203ENST00000374429 ADARB2-AS1A8MUL3 147 aa8.07□□□□□ -1.12
CXCL12-203ENST00000374429 DSCR9P59020 149 aa8.07□□□□□ -1.12
CXCL12-203ENST00000374429 DUSP14O95147 198 aaKnown RBP8.07□□□□□ -1.12
CXCL12-203ENST00000374429 NPC2P61916 151 aa8.07□□□□□ -1.12
CXCL12-203ENST00000374429 ZNF702PQ9H963 129 aa8.07□□□□□ -1.12
CXCL12-203ENST00000374429 NDUFV3P56181 108 aaKnown RBP8.07□□□□□ -1.12
CXCL12-203ENST00000374429 ZNF575Q86XF7 245 aa8.07□□□□□ -1.12
CXCL12-203ENST00000374429 IGLV1-40P01703 118 aa8.06□□□□□ -1.12
CXCL12-203ENST00000374429 IFITM1P13164 125 aa8.06□□□□□ -1.12
CXCL12-203ENST00000374429 C2orf66Q6UXQ4 117 aa8.06□□□□□ -1.12
CXCL12-203ENST00000374429 DPH3P1Q9H4G8 78 aa8.06□□□□□ -1.12
CXCL12-203ENST00000374429 RNASE3P12724 160 aaKnown RBP8.06□□□□□ -1.12
CXCL12-203ENST00000374429 NXT2Q9NPJ8 142 aaKnown RBP8.06□□□□□ -1.12
CXCL12-203ENST00000374429 TP53TG1Q9Y2A0 90 aa8.06□□□□□ -1.12
CXCL12-203ENST00000374429 SDHAF1A6NFY7 115 aa8.06□□□□□ -1.12
CXCL12-203ENST00000374429 A0A087WX48 190 aa8.05□□□□□ -1.12
CXCL12-203ENST00000374429 LOC107984156A0A0G2JMH3 177 aa8.05□□□□□ -1.12
CXCL12-203ENST00000374429 DNAJC9-AS1A6NH13 148 aa8.05□□□□□ -1.12
CXCL12-203ENST00000374429 IGKCP01834 107 aa8.05□□□□□ -1.12
CXCL12-203ENST00000374429 ARL17AQ8IVW1 177 aa8.05□□□□□ -1.12
CXCL12-203ENST00000374429 DCANP1Q8TF63 244 aa8.05□□□□□ -1.12
CXCL12-203ENST00000374429 SMIM9A6NGZ8 99 aa8.05□□□□□ -1.12
CXCL12-203ENST00000374429 LGALS1P09382 135 aaKnown RBP8.05□□□□□ -1.12
CXCL12-203ENST00000374429 Q6YL49 198 aa8.05□□□□□ -1.12
CXCL12-203ENST00000374429 RASL10AQ92737 203 aa8.05□□□□□ -1.12
CXCL12-203ENST00000374429 CRXO43186 299 aaPredicted RBP8.04□□□□□ -1.12
CXCL12-203ENST00000374429 SRSF9Q13242 221 aaKnown RBP eCLIP8.04□□□□□ -1.12
CXCL12-203ENST00000374429 HIST1H4GQ99525 98 aa8.04□□□□□ -1.12
CXCL12-203ENST00000374429 U3KQE9 123 aa8.04□□□□□ -1.12
CXCL12-203ENST00000374429 SMIM2Q9BVW6 85 aa8.04□□□□□ -1.12
CXCL12-203ENST00000374429 TRGV1A0A0A0MS02 117 aa8.04□□□□□ -1.12
CXCL12-203ENST00000374429 J3QKU1 62 aa8.04□□□□□ -1.12
CXCL12-203ENST00000374429 SUMO4Q6EEV6 95 aa8.04□□□□□ -1.12
CXCL12-203ENST00000374429 ZNF493Q6ZR52 646 aa8.04□□□□□ -1.12
CXCL12-203ENST00000374429 Q6ZSV7 163 aa8.04□□□□□ -1.12
CXCL12-203ENST00000374429 ESM1Q9NQ30 184 aa8.04□□□□□ -1.12
CXCL12-203ENST00000374429 LOC107984640A0A0U1RRK4 108 aa8.03□□□□□ -1.12
CXCL12-203ENST00000374429 LINC01619G3V211 115 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms