RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 GAGE12BA1L429 117 aa7.65□□□□□ -1.18
COL5A1-202ENST00000371820 PRAC2D3DTV9 90 aa7.65□□□□□ -1.18
COL5A1-202ENST00000371820 ZNF207O43670 478 aaKnown RBP7.65□□□□□ -1.18
COL5A1-202ENST00000371820 NCR2O95944 276 aa7.65□□□□□ -1.18
COL5A1-202ENST00000371820 FABP2P12104 132 aa7.65□□□□□ -1.18
COL5A1-202ENST00000371820 NMUP48645 174 aa7.65□□□□□ -1.18
COL5A1-202ENST00000371820 APRG1Q8IVJ8 170 aa7.65□□□□□ -1.18
COL5A1-202ENST00000371820 IL17DQ8TAD2 202 aa7.65□□□□□ -1.18
COL5A1-202ENST00000371820 PHLDA3Q9Y5J5 127 aa7.65□□□□□ -1.18
COL5A1-202ENST00000371820 CSMD3Q7Z407 3707 aa7.65□□□□□ -1.19
COL5A1-202ENST00000371820 IGHV7-4-1A0A0J9YVY3 117 aa7.64□□□□□ -1.19
COL5A1-202ENST00000371820 RBMY1BA6NDE4 496 aaKnown RBP7.64□□□□□ -1.19
COL5A1-202ENST00000371820 RBMY1EA6NEQ0 496 aaKnown RBP7.64□□□□□ -1.19
COL5A1-202ENST00000371820 RBMY1DP0C7P1 496 aaKnown RBP7.64□□□□□ -1.19
COL5A1-202ENST00000371820 HLA-DMBP28068 263 aa7.64□□□□□ -1.19
COL5A1-202ENST00000371820 ZFAND6Q6FIF0 208 aa7.64□□□□□ -1.19
COL5A1-202ENST00000371820 ZNF575Q86XF7 245 aa7.64□□□□□ -1.19
COL5A1-202ENST00000371820 ODF3Q96PU9 254 aa7.64□□□□□ -1.19
COL5A1-202ENST00000371820 FAM110AQ9BQ89 295 aa7.64□□□□□ -1.19
COL5A1-202ENST00000371820 SMIM2Q9BVW6 85 aa7.64□□□□□ -1.19
COL5A1-202ENST00000371820 TM2D2Q9BX73 214 aa7.64□□□□□ -1.19
COL5A1-202ENST00000371820 WFDC10AQ9H1F0 79 aa7.64□□□□□ -1.19
COL5A1-202ENST00000371820 CST9LQ9H4G1 147 aa7.64□□□□□ -1.19
COL5A1-202ENST00000371820 HHLA3Q9XRX5 114 aa7.64□□□□□ -1.19
COL5A1-202ENST00000371820 F8VRH5 84 aa7.63□□□□□ -1.19
COL5A1-202ENST00000371820 SMKR1H3BMG3 65 aa7.63□□□□□ -1.19
COL5A1-202ENST00000371820 APOC4P55056 127 aa7.63□□□□□ -1.19
COL5A1-202ENST00000371820 IGFL4Q6B9Z1 124 aa7.63□□□□□ -1.19
COL5A1-202ENST00000371820 RNF182Q8N6D2 247 aa7.63□□□□□ -1.19
COL5A1-202ENST00000371820 POM121L12Q8N7R1 296 aa7.63□□□□□ -1.19
COL5A1-202ENST00000371820 NRACQ8N912 160 aa7.63□□□□□ -1.19
COL5A1-202ENST00000371820 TOMM6Q96B49 74 aa7.63□□□□□ -1.19
COL5A1-202ENST00000371820 RHPN1-AS1Q9BWJ2 59 aa7.63□□□□□ -1.19
COL5A1-202ENST00000371820 MSRB1Q9NZV6 116 aa7.63□□□□□ -1.19
COL5A1-202ENST00000371820 SELENOKQ9Y6D0 94 aa7.63□□□□□ -1.19
COL5A1-202ENST00000371820 IGHV3OR16-8A0A075B7F1 116 aa7.62□□□□□ -1.19
COL5A1-202ENST00000371820 K7EP34 96 aa7.62□□□□□ -1.19
COL5A1-202ENST00000371820 SUMO2P61956 95 aaKnown RBP7.62□□□□□ -1.19
COL5A1-202ENST00000371820 OCIAD2Q56VL3 154 aa7.62□□□□□ -1.19
COL5A1-202ENST00000371820 FAM19A4Q96LR4 140 aa7.62□□□□□ -1.19
COL5A1-202ENST00000371820 C18orf15Q96N68 181 aa7.62□□□□□ -1.19
COL5A1-202ENST00000371820 SCGB3A1Q96QR1 104 aa7.62□□□□□ -1.19
COL5A1-202ENST00000371820 DKK2Q9UBU2 259 aa7.62□□□□□ -1.19
COL5A1-202ENST00000371820 TMEM238LA0A1B0GVL6 79 aa7.61□□□□□ -1.19
COL5A1-202ENST00000371820 A0A1W2PPM0 123 aa7.61□□□□□ -1.19
COL5A1-202ENST00000371820 A6NJY4 79 aa7.61□□□□□ -1.19
COL5A1-202ENST00000371820 J3QR89 54 aa7.61□□□□□ -1.19
COL5A1-202ENST00000371820 VCYO14598 125 aa7.61□□□□□ -1.19
COL5A1-202ENST00000371820 PCP4P48539 62 aa7.61□□□□□ -1.19
COL5A1-202ENST00000371820 HERVK_113P61574 105 aa7.61□□□□□ -1.19
COL5A1-202ENST00000371820 ZC2HC1BQ5TFG8 222 aa7.61□□□□□ -1.19
COL5A1-202ENST00000371820 CEND1Q8N111 149 aa7.61□□□□□ -1.19
COL5A1-202ENST00000371820 TMEM141Q96I45 108 aa7.61□□□□□ -1.19
COL5A1-202ENST00000371820 TP53TG1Q9Y2A0 90 aa7.61□□□□□ -1.19
COL5A1-202ENST00000371820 TRAV2A0A0B4J234 112 aa7.6□□□□□ -1.19
COL5A1-202ENST00000371820 TRAV8-6A0A0B4J262 113 aa7.6□□□□□ -1.19
COL5A1-202ENST00000371820 SOCS3O14543 225 aa7.6□□□□□ -1.19
COL5A1-202ENST00000371820 DUSP14O95147 198 aaKnown RBP7.6□□□□□ -1.19
COL5A1-202ENST00000371820 RBX1P62877 108 aa7.6□□□□□ -1.19
COL5A1-202ENST00000371820 UFSP1Q6NVU6 142 aa7.6□□□□□ -1.19
COL5A1-202ENST00000371820 FAM159AQ6UWV7 190 aa7.6□□□□□ -1.19
COL5A1-202ENST00000371820 SYT8Q8NBV8 401 aa7.6□□□□□ -1.19
COL5A1-202ENST00000371820 KIR2DL5BQ8NHK3 375 aa7.6□□□□□ -1.19
COL5A1-202ENST00000371820 VPS25Q9BRG1 176 aa7.6□□□□□ -1.19
COL5A1-202ENST00000371820 CHAC1Q9BUX1 264 aa7.6□□□□□ -1.19
COL5A1-202ENST00000371820 RETNQ9HD89 108 aa7.6□□□□□ -1.19
COL5A1-202ENST00000371820 CHTOPQ9Y3Y2 248 aaKnown RBP7.6□□□□□ -1.19
COL5A1-202ENST00000371820 HYDINQ4G0P3 5121 aa7.59□□□□□ -1.19
COL5A1-202ENST00000371820 TRBV25-1A0A075B6N4 114 aa7.59□□□□□ -1.19
COL5A1-202ENST00000371820 IGHV3-49A0A0A0MS15 119 aa7.59□□□□□ -1.19
COL5A1-202ENST00000371820 IGHV3-66A0A0C4DH42 116 aa7.59□□□□□ -1.19
COL5A1-202ENST00000371820 F8W1H4 67 aa7.59□□□□□ -1.19
COL5A1-202ENST00000371820 H3BUT2 72 aa7.59□□□□□ -1.19
COL5A1-202ENST00000371820 H3BVH4 76 aa7.59□□□□□ -1.19
COL5A1-202ENST00000371820 NXPH4O95158 308 aa7.59□□□□□ -1.19
COL5A1-202ENST00000371820 RPL11P62913 178 aaKnown RBP7.59□□□□□ -1.19
COL5A1-202ENST00000371820 ODF3L2Q3SX64 289 aa7.59□□□□□ -1.19
COL5A1-202ENST00000371820 LYRM7Q5U5X0 104 aa7.59□□□□□ -1.19
COL5A1-202ENST00000371820 ZFAND2AQ8N6M9 145 aa7.59□□□□□ -1.19
COL5A1-202ENST00000371820 OR11H2Q8NH07 326 aa7.59□□□□□ -1.19
COL5A1-202ENST00000371820 RNASE8Q8TDE3 154 aaKnown RBP7.59□□□□□ -1.19
COL5A1-202ENST00000371820 C11orf21Q9P2W6 132 aa7.59□□□□□ -1.19
COL5A1-202ENST00000371820 SPCS1Q9Y6A9 102 aa7.59□□□□□ -1.19
COL5A1-202ENST00000371820 IGKV3-7A0A075B6H7 116 aa7.58□□□□□ -1.2
COL5A1-202ENST00000371820 IGHV3OR16-13A0A075B7E8 117 aa7.58□□□□□ -1.2
COL5A1-202ENST00000371820 IGHV3-74A0A0B4J1X5 117 aa7.58□□□□□ -1.2
COL5A1-202ENST00000371820 GCSHP23434 173 aa7.58□□□□□ -1.2
COL5A1-202ENST00000371820 SNRPD3P62318 126 aaKnown RBP7.58□□□□□ -1.2
COL5A1-202ENST00000371820 COTL1Q14019 142 aa7.58□□□□□ -1.2
COL5A1-202ENST00000371820 PCP2Q8IVA1 136 aa7.58□□□□□ -1.2
COL5A1-202ENST00000371820 KIR2DL4Q99706 377 aa7.58□□□□□ -1.2
COL5A1-202ENST00000371820 MRPL35Q9NZE8 188 aaKnown RBP7.58□□□□□ -1.2
COL5A1-202ENST00000371820 CYSLTR1Q9Y271 337 aa7.58□□□□□ -1.2
COL5A1-202ENST00000371820 PLECQ15149 4684 aaKnown RBP7.58□□□□□ -1.2
COL5A1-202ENST00000371820 ALMS1Q8TCU4 4167 aa7.57□□□□□ -1.2
COL5A1-202ENST00000371820 TRBV6-5A0A0K0K1A5 114 aa7.57□□□□□ -1.2
COL5A1-202ENST00000371820 MYMXA0A1B0GTQ4 84 aa7.57□□□□□ -1.2
COL5A1-202ENST00000371820 E9PLD3 99 aa7.57□□□□□ -1.2
COL5A1-202ENST00000371820 SPRY2O43597 315 aa7.57□□□□□ -1.2
COL5A1-202ENST00000371820 RNASE4P34096 147 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms