RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 P0DMU3 169 aa16.87■□□□□ 0.29
TM9SF3-201ENST00000371142 FAM231AP0DMU4 169 aa16.87■□□□□ 0.29
TM9SF3-201ENST00000371142 FAM231CP0DMU5 169 aa16.87■□□□□ 0.29
TM9SF3-201ENST00000371142 TEN1Q86WV5 123 aa16.87■□□□□ 0.29
TM9SF3-201ENST00000371142 TP53TG3Q9ULZ0 132 aa16.87■□□□□ 0.29
TM9SF3-201ENST00000371142 IGHV1-58A0A0C4DH39 117 aa16.87■□□□□ 0.29
TM9SF3-201ENST00000371142 ODF1Q14990 250 aa16.87■□□□□ 0.29
TM9SF3-201ENST00000371142 HIGD1BQ9P298 99 aa16.86■□□□□ 0.29
TM9SF3-201ENST00000371142 NFE4Q86UQ8 179 aa16.86■□□□□ 0.29
TM9SF3-201ENST00000371142 Q6ZUT4 128 aa16.85■□□□□ 0.29
TM9SF3-201ENST00000371142 KLK5Q9Y337 293 aaPredicted RBP16.85■□□□□ 0.29
TM9SF3-201ENST00000371142 C4orf48Q5BLP8 95 aa16.85■□□□□ 0.29
TM9SF3-201ENST00000371142 PLXNB3Q9ULL4 1909 aa16.85■□□□□ 0.29
TM9SF3-201ENST00000371142 LINC01548A6NM66 108 aa16.84■□□□□ 0.29
TM9SF3-201ENST00000371142 HIGD2BQ4VC39 106 aa16.84■□□□□ 0.29
TM9SF3-201ENST00000371142 NACAE9PAV3 2078 aa16.84■□□□□ 0.29
TM9SF3-201ENST00000371142 Q8NA96 180 aa16.84■□□□□ 0.29
TM9SF3-201ENST00000371142 CCDC140Q96MF4 163 aa16.84■□□□□ 0.29
TM9SF3-201ENST00000371142 PRO0255Q9UI72 69 aa16.84■□□□□ 0.29
TM9SF3-201ENST00000371142 SPRY4Q9C004 299 aa16.84■□□□□ 0.29
TM9SF3-201ENST00000371142 H3BQ85 93 aa16.84■□□□□ 0.29
TM9SF3-201ENST00000371142 MED13LQ71F56 2210 aa16.83■□□□□ 0.29
TM9SF3-201ENST00000371142 C20orf203Q8NBC4 194 aa16.83■□□□□ 0.29
TM9SF3-201ENST00000371142 PLA2G5P39877 138 aa16.83■□□□□ 0.29
TM9SF3-201ENST00000371142 TNRC6BQ9UPQ9 1833 aaKnown RBP16.83■□□□□ 0.28
TM9SF3-201ENST00000371142 IGKV1D-37A0A075B6S9 117 aa16.83■□□□□ 0.28
TM9SF3-201ENST00000371142 C19orf71A6NCJ1 209 aa16.83■□□□□ 0.28
TM9SF3-201ENST00000371142 TAX1BP3O14907 124 aa16.83■□□□□ 0.28
TM9SF3-201ENST00000371142 TRBV6-1A0A0K0K1D8 114 aa16.82■□□□□ 0.28
TM9SF3-201ENST00000371142 ATOX1O00244 68 aa16.82■□□□□ 0.28
TM9SF3-201ENST00000371142 TRBV10-2A0A0K0K1G8 114 aa16.82■□□□□ 0.28
TM9SF3-201ENST00000371142 ZNF80P51504 273 aaPredicted RBP16.82■□□□□ 0.28
TM9SF3-201ENST00000371142 JMJD7-PLA2G4BH0Y9G9 81 aa16.82■□□□□ 0.28
TM9SF3-201ENST00000371142 LOXL1Q08397 574 aaPredicted RBP16.81■□□□□ 0.28
TM9SF3-201ENST00000371142 IGKV2-24A0A0C4DH68 120 aa16.8■□□□□ 0.28
TM9SF3-201ENST00000371142 H0Y9J4 135 aa16.8■□□□□ 0.28
TM9SF3-201ENST00000371142 FOXI1Q12951 378 aa16.8■□□□□ 0.28
TM9SF3-201ENST00000371142 TRAV26-1A0A087WT03 109 aa16.79■□□□□ 0.28
TM9SF3-201ENST00000371142 TNRC6AQ8NDV7 1962 aaKnown RBP16.79■□□□□ 0.28
TM9SF3-201ENST00000371142 Q6ZTI0 123 aa16.79■□□□□ 0.28
TM9SF3-201ENST00000371142 SPANXCQ9NY87 97 aa16.78■□□□□ 0.28
TM9SF3-201ENST00000371142 IGKV2D-26A0A0A0MRZ7 120 aa16.78■□□□□ 0.28
TM9SF3-201ENST00000371142 SPATA25Q9BR10 227 aa16.78■□□□□ 0.28
TM9SF3-201ENST00000371142 CREBBPQ92793 2442 aa16.77■□□□□ 0.28
TM9SF3-201ENST00000371142 C19orf84I3L1E1 186 aa16.77■□□□□ 0.28
TM9SF3-201ENST00000371142 COX7BP24311 80 aa16.77■□□□□ 0.28
TM9SF3-201ENST00000371142 LINC00269Q8N2A0 174 aa16.77■□□□□ 0.28
TM9SF3-201ENST00000371142 C11orf45Q8TAV5 145 aa16.77■□□□□ 0.28
TM9SF3-201ENST00000371142 INSL3P51460 131 aa16.77■□□□□ 0.28
TM9SF3-201ENST00000371142 FBXL19-AS1Q494R0 122 aa16.77■□□□□ 0.28
TM9SF3-201ENST00000371142 TMEM256-PLSCR3K7ERE1 68 aa16.77■□□□□ 0.27
TM9SF3-201ENST00000371142 ADAMTS9Q9P2N4 1935 aa16.77■□□□□ 0.27
TM9SF3-201ENST00000371142 PLCE1Q9P212 2302 aa16.76■□□□□ 0.27
TM9SF3-201ENST00000371142 LINC00322Q6ZN03 302 aaPredicted RBP16.76■□□□□ 0.27
TM9SF3-201ENST00000371142 TNFRSF13BO14836 293 aaPredicted RBP16.76■□□□□ 0.27
TM9SF3-201ENST00000371142 CRYGBP07316 175 aa16.76■□□□□ 0.27
TM9SF3-201ENST00000371142 PTH2Q96A98 100 aa16.76■□□□□ 0.27
TM9SF3-201ENST00000371142 C11orf1Q9H5F2 150 aa16.76■□□□□ 0.27
TM9SF3-201ENST00000371142 ODF3BA8MYP8 253 aa16.76■□□□□ 0.27
TM9SF3-201ENST00000371142 TRBV10-1A0A0K0K1A3 114 aa16.75■□□□□ 0.27
TM9SF3-201ENST00000371142 LMO4P61968 165 aa16.74■□□□□ 0.27
TM9SF3-201ENST00000371142 B9D2Q9BPU9 175 aa16.74■□□□□ 0.27
TM9SF3-201ENST00000371142 MIAQ16674 131 aa16.74■□□□□ 0.27
TM9SF3-201ENST00000371142 ZFAND2AQ8N6M9 145 aa16.74■□□□□ 0.27
TM9SF3-201ENST00000371142 NDUFA11Q86Y39 141 aa16.73■□□□□ 0.27
TM9SF3-201ENST00000371142 RNASE8Q8TDE3 154 aaKnown RBP16.73■□□□□ 0.27
TM9SF3-201ENST00000371142 OBSL1O75147 1896 aa16.73■□□□□ 0.27
TM9SF3-201ENST00000371142 REG3AQ06141 175 aa16.73■□□□□ 0.27
TM9SF3-201ENST00000371142 PCNX2A6NKB5 2137 aa16.72■□□□□ 0.27
TM9SF3-201ENST00000371142 H3BT86 120 aa16.72■□□□□ 0.27
TM9SF3-201ENST00000371142 RNF183Q96D59 192 aa16.72■□□□□ 0.27
TM9SF3-201ENST00000371142 SMIM20Q8N5G0 67 aa16.71■□□□□ 0.27
TM9SF3-201ENST00000371142 FAM222AQ5U5X8 452 aa16.71■□□□□ 0.27
TM9SF3-201ENST00000371142 C20orf173Q96LM9 149 aa16.71■□□□□ 0.26
TM9SF3-201ENST00000371142 A0A0J9YXY3 114 aa16.7■□□□□ 0.26
TM9SF3-201ENST00000371142 P0C879 139 aa16.7■□□□□ 0.26
TM9SF3-201ENST00000371142 C1orf229Q6ZS94 237 aaPredicted RBP16.7■□□□□ 0.26
TM9SF3-201ENST00000371142 IGHV4-31P0DP07 118 aa16.7■□□□□ 0.26
TM9SF3-201ENST00000371142 LINC00467Q9BRT7 94 aa16.7■□□□□ 0.26
TM9SF3-201ENST00000371142 HIGD2AQ9BW72 106 aa16.7■□□□□ 0.26
TM9SF3-201ENST00000371142 TCL1BO95988 128 aa16.69■□□□□ 0.26
TM9SF3-201ENST00000371142 IGLV2-8P01709 118 aa16.69■□□□□ 0.26
TM9SF3-201ENST00000371142 COL4A3Q01955 1670 aa16.69■□□□□ 0.26
TM9SF3-201ENST00000371142 A0A1B0GXF2 115 aa16.69■□□□□ 0.26
TM9SF3-201ENST00000371142 IGF1P05019 195 aa16.69■□□□□ 0.26
TM9SF3-201ENST00000371142 Q6YL49 198 aa16.69■□□□□ 0.26
TM9SF3-201ENST00000371142 FAM110AQ9BQ89 295 aa16.69■□□□□ 0.26
TM9SF3-201ENST00000371142 BRWD1-AS2P59051 145 aa16.68■□□□□ 0.26
TM9SF3-201ENST00000371142 GDF5OSQ5U4N7 250 aa16.68■□□□□ 0.26
TM9SF3-201ENST00000371142 ARHGAP21Q5T5U3 1957 aa16.67■□□□□ 0.26
TM9SF3-201ENST00000371142 A0A096LNI7 61 aa16.67■□□□□ 0.26
TM9SF3-201ENST00000371142 HIST2H2BDQ6DRA6 164 aa16.66■□□□□ 0.26
TM9SF3-201ENST00000371142 CHCHD10Q8WYQ3 142 aaPredicted RBP16.66■□□□□ 0.26
TM9SF3-201ENST00000371142 UFSP1Q6NVU6 142 aa16.66■□□□□ 0.26
TM9SF3-201ENST00000371142 Q6ZPA2 131 aa16.66■□□□□ 0.26
TM9SF3-201ENST00000371142 C22orf34Q6ZV56 151 aa16.66■□□□□ 0.26
TM9SF3-201ENST00000371142 PRORYQ9H606 182 aa16.65■□□□□ 0.26
TM9SF3-201ENST00000371142 CRYGDP07320 174 aa16.65■□□□□ 0.26
TM9SF3-201ENST00000371142 DEFB114Q30KQ6 69 aa16.65■□□□□ 0.26
TM9SF3-201ENST00000371142 SPATA12Q7Z6I5 190 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms