RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 TMEM61Q8N0U2 210 aa7.52□□□□□ -1.21
TPM3-209ENST00000368527 MAPKAPK5-AS1Q8N8E1 139 aa7.52□□□□□ -1.21
TPM3-209ENST00000368527 KLHL30-AS1Q8NEE0 82 aa7.52□□□□□ -1.21
TPM3-209ENST00000368527 PHLDA1Q8WV24 401 aaPredicted RBP7.52□□□□□ -1.21
TPM3-209ENST00000368527 PLEKHB2Q96CS7 222 aa7.52□□□□□ -1.21
TPM3-209ENST00000368527 JPT2Q9H910 190 aa7.52□□□□□ -1.21
TPM3-209ENST00000368527 MAP6D1Q9H9H5 199 aa7.52□□□□□ -1.21
TPM3-209ENST00000368527 SPANXA1Q9NS26 97 aa7.52□□□□□ -1.21
TPM3-209ENST00000368527 TNFRSF18Q9Y5U5 241 aa7.52□□□□□ -1.21
TPM3-209ENST00000368527 FLNCQ14315 2725 aa7.52□□□□□ -1.21
TPM3-209ENST00000368527 SPG11Q96JI7 2443 aa7.51□□□□□ -1.21
TPM3-209ENST00000368527 PTPN13Q12923 2485 aa7.51□□□□□ -1.21
TPM3-209ENST00000368527 SPRY2O43597 315 aa7.51□□□□□ -1.21
TPM3-209ENST00000368527 CIDEAO60543 219 aa7.51□□□□□ -1.21
TPM3-209ENST00000368527 FHL3Q13643 280 aa7.51□□□□□ -1.21
TPM3-209ENST00000368527 KHDC1LQ5JSQ8 128 aa7.51□□□□□ -1.21
TPM3-209ENST00000368527 KRTAP1-3Q8IUG1 177 aa7.51□□□□□ -1.21
TPM3-209ENST00000368527 RAB37Q96AX2 223 aa7.51□□□□□ -1.21
TPM3-209ENST00000368527 FAM110AQ9BQ89 295 aa7.51□□□□□ -1.21
TPM3-209ENST00000368527 VCX2Q9H322 139 aa7.51□□□□□ -1.21
TPM3-209ENST00000368527 C16orf95Q9H693 158 aa7.51□□□□□ -1.21
TPM3-209ENST00000368527 LRRK2Q5S007 2527 aa7.51□□□□□ -1.21
TPM3-209ENST00000368527 KNCNA6PVL3 124 aa7.5□□□□□ -1.21
TPM3-209ENST00000368527 IGLL5B9A064 214 aa7.5□□□□□ -1.21
TPM3-209ENST00000368527 F8W1H4 67 aa7.5□□□□□ -1.21
TPM3-209ENST00000368527 LEPROTO15243 131 aa7.5□□□□□ -1.21
TPM3-209ENST00000368527 LGALS3P17931 250 aaKnown RBP7.5□□□□□ -1.21
TPM3-209ENST00000368527 KRTAP10-9P60411 292 aa7.5□□□□□ -1.21
TPM3-209ENST00000368527 SRSF9Q13242 221 aaKnown RBP eCLIP7.5□□□□□ -1.21
TPM3-209ENST00000368527 RRN3P1Q2M238 152 aa7.5□□□□□ -1.21
TPM3-209ENST00000368527 MORN3Q6PF18 240 aaPredicted RBP7.5□□□□□ -1.21
TPM3-209ENST00000368527 Q6ZSV7 163 aa7.5□□□□□ -1.21
TPM3-209ENST00000368527 DLX4Q92988 240 aaPredicted RBP7.5□□□□□ -1.21
TPM3-209ENST00000368527 ZNF479Q96JC4 524 aa7.5□□□□□ -1.21
TPM3-209ENST00000368527 ANKRD17O75179 2603 aaKnown RBP7.5□□□□□ -1.21
TPM3-209ENST00000368527 UBR5O95071 2799 aaPredicted RBP7.5□□□□□ -1.21
TPM3-209ENST00000368527 NBPF19A0A087WUL8 3843 aa7.49□□□□□ -1.21
TPM3-209ENST00000368527 DNAJC9-AS1A6NH13 148 aa7.49□□□□□ -1.21
TPM3-209ENST00000368527 RS1O15537 224 aa7.49□□□□□ -1.21
TPM3-209ENST00000368527 IGHV3-53P01767 116 aa7.49□□□□□ -1.21
TPM3-209ENST00000368527 RBX1P62877 108 aa7.49□□□□□ -1.21
TPM3-209ENST00000368527 TMEM170BQ5T4T1 132 aa7.49□□□□□ -1.21
TPM3-209ENST00000368527 NEGR1Q7Z3B1 354 aa7.49□□□□□ -1.21
TPM3-209ENST00000368527 RNASE8Q8TDE3 154 aaKnown RBP7.49□□□□□ -1.21
TPM3-209ENST00000368527 LINC01587Q99440 93 aa7.49□□□□□ -1.21
TPM3-209ENST00000368527 TIMM21Q9BVV7 248 aa7.49□□□□□ -1.21
TPM3-209ENST00000368527 TTTY13Q9BZ97 58 aa7.49□□□□□ -1.21
TPM3-209ENST00000368527 TSSC4Q9Y5U2 329 aaPredicted RBP7.49□□□□□ -1.21
TPM3-209ENST00000368527 MUC4Q99102 2169 aa7.49□□□□□ -1.21
TPM3-209ENST00000368527 J3QQQ9 107 aa7.48□□□□□ -1.21
TPM3-209ENST00000368527 J3QR89 54 aa7.48□□□□□ -1.21
TPM3-209ENST00000368527 RNASE1P07998 156 aaKnown RBP7.48□□□□□ -1.21
TPM3-209ENST00000368527 RPL39P62891 51 aaKnown RBP7.48□□□□□ -1.21
TPM3-209ENST00000368527 NOTCH2Q04721 2471 aa7.48□□□□□ -1.21
TPM3-209ENST00000368527 DEFB136Q30KP8 78 aa7.48□□□□□ -1.21
TPM3-209ENST00000368527 CD300EQ496F6 205 aaPredicted RBP7.48□□□□□ -1.21
TPM3-209ENST00000368527 STHQ8IWL8 128 aa7.48□□□□□ -1.21
TPM3-209ENST00000368527 SLC25A29Q8N8R3 303 aa7.48□□□□□ -1.21
TPM3-209ENST00000368527 CR1P17927 2039 aa7.47□□□□□ -1.21
TPM3-209ENST00000368527 IGLV4-3A0A075B6K6 122 aa7.47□□□□□ -1.21
TPM3-209ENST00000368527 A0A0J9YY99 117 aa7.47□□□□□ -1.21
TPM3-209ENST00000368527 TRBV10-1A0A0K0K1A3 114 aa7.47□□□□□ -1.21
TPM3-209ENST00000368527 TMEM223A0PJW6 202 aa7.47□□□□□ -1.21
TPM3-209ENST00000368527 CCL24O00175 119 aa7.47□□□□□ -1.21
TPM3-209ENST00000368527 P0DMU3 169 aa7.47□□□□□ -1.21
TPM3-209ENST00000368527 FAM231AP0DMU4 169 aa7.47□□□□□ -1.21
TPM3-209ENST00000368527 FAM231CP0DMU5 169 aa7.47□□□□□ -1.21
TPM3-209ENST00000368527 UBE2D1P51668 147 aa7.47□□□□□ -1.21
TPM3-209ENST00000368527 CFAP126Q5VTH2 177 aa7.47□□□□□ -1.21
TPM3-209ENST00000368527 AMELXQ99217 191 aa7.47□□□□□ -1.21
TPM3-209ENST00000368527 SELENOKQ9Y6D0 94 aa7.47□□□□□ -1.21
TPM3-209ENST00000368527 CSPG4Q6UVK1 2322 aa7.47□□□□□ -1.21
TPM3-209ENST00000368527 CREBBPQ92793 2442 aa7.47□□□□□ -1.21
TPM3-209ENST00000368527 RBMY1BA6NDE4 496 aaKnown RBP7.46□□□□□ -1.22
TPM3-209ENST00000368527 RBMY1EA6NEQ0 496 aaKnown RBP7.46□□□□□ -1.22
TPM3-209ENST00000368527 TMEM238C9JI98 176 aa7.46□□□□□ -1.22
TPM3-209ENST00000368527 RBMY1DP0C7P1 496 aaKnown RBP7.46□□□□□ -1.22
TPM3-209ENST00000368527 RBMY1A1P0DJD3 496 aaKnown RBP7.46□□□□□ -1.22
TPM3-209ENST00000368527 RBMY1CP0DJD4 496 aa7.46□□□□□ -1.22
TPM3-209ENST00000368527 CD28P10747 220 aa7.46□□□□□ -1.22
TPM3-209ENST00000368527 MRPS36P82909 103 aaKnown RBP7.46□□□□□ -1.22
TPM3-209ENST00000368527 COTL1Q14019 142 aa7.46□□□□□ -1.22
TPM3-209ENST00000368527 RBMY1FQ15415 496 aaKnown RBP7.46□□□□□ -1.22
TPM3-209ENST00000368527 C11orf72Q8NBR9 251 aa7.46□□□□□ -1.22
TPM3-209ENST00000368527 ZNF418Q8TF45 676 aaPredicted RBP7.46□□□□□ -1.22
TPM3-209ENST00000368527 C1QTNF4Q9BXJ3 329 aa7.46□□□□□ -1.22
TPM3-209ENST00000368527 USP9YO00507 2555 aaPredicted RBP7.46□□□□□ -1.22
TPM3-209ENST00000368527 TRBV20-1A0A075B6N2 111 aa7.45□□□□□ -1.22
TPM3-209ENST00000368527 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.45□□□□□ -1.22
TPM3-209ENST00000368527 TINCRA0A1B0GVN0 87 aa7.45□□□□□ -1.22
TPM3-209ENST00000368527 NDUFA7O95182 113 aa7.45□□□□□ -1.22
TPM3-209ENST00000368527 RPL24P83731 157 aaKnown RBP7.45□□□□□ -1.22
TPM3-209ENST00000368527 C18orf65Q6ZTR6 163 aa7.45□□□□□ -1.22
TPM3-209ENST00000368527 ZNRF2Q8NHG8 242 aa7.45□□□□□ -1.22
TPM3-209ENST00000368527 VPS25Q9BRG1 176 aa7.45□□□□□ -1.22
TPM3-209ENST00000368527 ZNF22P17026 224 aaPredicted RBP7.44□□□□□ -1.22
TPM3-209ENST00000368527 IL17DQ8TAD2 202 aa7.44□□□□□ -1.22
TPM3-209ENST00000368527 TMEM263Q8WUH6 116 aaKnown RBP7.44□□□□□ -1.22
TPM3-209ENST00000368527 MRPL16Q9NX20 251 aaKnown RBP7.44□□□□□ -1.22
TPM3-209ENST00000368527 G3V4G9 280 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms