RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 ZNF580Q9UK33 172 aa15.4■□□□□ 0.06
TRIM3-202ENST00000359518 MXRA5Q9NR99 2828 aa15.4■□□□□ 0.06
TRIM3-202ENST00000359518 TRBV7-9A0A0J9YWB2 115 aa15.39■□□□□ 0.05
TRIM3-202ENST00000359518 TRBV27A0A0K0K1C4 114 aa15.39■□□□□ 0.05
TRIM3-202ENST00000359518 PRM2P04554 102 aa15.39■□□□□ 0.05
TRIM3-202ENST00000359518 NRGNQ92686 78 aa15.39■□□□□ 0.05
TRIM3-202ENST00000359518 TIMM17AQ99595 171 aa15.39■□□□□ 0.05
TRIM3-202ENST00000359518 C1QTNF4Q9BXJ3 329 aa15.39■□□□□ 0.05
TRIM3-202ENST00000359518 C2CD3Q4AC94 2353 aa15.39■□□□□ 0.05
TRIM3-202ENST00000359518 M0QY20 66 aa15.39■□□□□ 0.05
TRIM3-202ENST00000359518 IGHV4-59P01825 116 aa15.39■□□□□ 0.05
TRIM3-202ENST00000359518 TRAV26-1A0A087WT03 109 aa15.38■□□□□ 0.05
TRIM3-202ENST00000359518 ADARB2-AS1A8MUL3 147 aa15.38■□□□□ 0.05
TRIM3-202ENST00000359518 MSMBP08118 114 aa15.38■□□□□ 0.05
TRIM3-202ENST00000359518 SYNJ2BPP57105 145 aa15.38■□□□□ 0.05
TRIM3-202ENST00000359518 SLC25A29Q8N8R3 303 aa15.38■□□□□ 0.05
TRIM3-202ENST00000359518 TRAV2A0A0B4J234 112 aa15.38■□□□□ 0.05
TRIM3-202ENST00000359518 P0DMU3 169 aa15.38■□□□□ 0.05
TRIM3-202ENST00000359518 FAM231AP0DMU4 169 aa15.38■□□□□ 0.05
TRIM3-202ENST00000359518 FAM231CP0DMU5 169 aa15.38■□□□□ 0.05
TRIM3-202ENST00000359518 LGALS9O00182 355 aa15.37■□□□□ 0.05
TRIM3-202ENST00000359518 UBE2D3P61077 147 aa15.37■□□□□ 0.05
TRIM3-202ENST00000359518 UBE2D2P62837 147 aa15.37■□□□□ 0.05
TRIM3-202ENST00000359518 DOPEY1Q5JWR5 2465 aa15.37■□□□□ 0.05
TRIM3-202ENST00000359518 A0A0J9YXV3 536 aa15.37■□□□□ 0.05
TRIM3-202ENST00000359518 AMELXQ99217 191 aa15.36■□□□□ 0.05
TRIM3-202ENST00000359518 A0A0J9YX75 114 aa15.36■□□□□ 0.05
TRIM3-202ENST00000359518 RPL32P62910 135 aaKnown RBP15.36■□□□□ 0.05
TRIM3-202ENST00000359518 RNASE13Q5GAN3 156 aaKnown RBP15.36■□□□□ 0.05
TRIM3-202ENST00000359518 C9orf85Q96MD7 179 aa15.36■□□□□ 0.05
TRIM3-202ENST00000359518 ANKRD17O75179 2603 aaKnown RBP15.36■□□□□ 0.05
TRIM3-202ENST00000359518 A4D1N5 150 aa15.35■□□□□ 0.05
TRIM3-202ENST00000359518 FHL3Q13643 280 aa15.35■□□□□ 0.05
TRIM3-202ENST00000359518 MAPK1IP1LQ8NDC0 245 aa15.35■□□□□ 0.05
TRIM3-202ENST00000359518 ZFYVE26Q68DK2 2539 aa15.35■□□□□ 0.05
TRIM3-202ENST00000359518 PROK1P58294 105 aa15.35■□□□□ 0.05
TRIM3-202ENST00000359518 SNRPD3P62318 126 aaKnown RBP15.35■□□□□ 0.05
TRIM3-202ENST00000359518 IGHV1OR15-1A0A075B7D0 117 aa15.35■□□□□ 0.05
TRIM3-202ENST00000359518 CFHR3Q02985 330 aa15.35■□□□□ 0.05
TRIM3-202ENST00000359518 CEMP1Q6PRD7 247 aaPredicted RBP15.35■□□□□ 0.05
TRIM3-202ENST00000359518 C10orf126Q8N4M7 172 aa15.34■□□□□ 0.05
TRIM3-202ENST00000359518 PRO1854Q9UHT4 67 aa15.34■□□□□ 0.05
TRIM3-202ENST00000359518 SETD2Q9BYW2 2564 aaPredicted RBP15.34■□□□□ 0.05
TRIM3-202ENST00000359518 K7EMT4 169 aa15.34■□□□□ 0.05
TRIM3-202ENST00000359518 WNK1Q9H4A3 2382 aa15.34■□□□□ 0.05
TRIM3-202ENST00000359518 KNCNA6PVL3 124 aa15.33■□□□□ 0.05
TRIM3-202ENST00000359518 CARD19Q96LW7 228 aa15.33■□□□□ 0.05
TRIM3-202ENST00000359518 PSMB8P28062 276 aa15.33■□□□□ 0.04
TRIM3-202ENST00000359518 CRYBA4P53673 196 aa15.33■□□□□ 0.04
TRIM3-202ENST00000359518 SPXQ9BT56 116 aa15.33■□□□□ 0.04
TRIM3-202ENST00000359518 PRRC2AP48634 2157 aaKnown RBP15.33■□□□□ 0.04
TRIM3-202ENST00000359518 DEFB112Q30KQ8 113 aa15.33■□□□□ 0.04
TRIM3-202ENST00000359518 CDIP1Q9H305 208 aa15.33■□□□□ 0.04
TRIM3-202ENST00000359518 TRBV6-5A0A0K0K1A5 114 aa15.32■□□□□ 0.04
TRIM3-202ENST00000359518 TRPT1Q86TN4 253 aaKnown RBP15.32■□□□□ 0.04
TRIM3-202ENST00000359518 Q9UF83 564 aa15.32■□□□□ 0.04
TRIM3-202ENST00000359518 PTPN13Q12923 2485 aa15.32■□□□□ 0.04
TRIM3-202ENST00000359518 ABCA12Q86UK0 2595 aa15.32■□□□□ 0.04
TRIM3-202ENST00000359518 LRRK2Q5S007 2527 aa15.32■□□□□ 0.04
TRIM3-202ENST00000359518 BRI3O95415 125 aa15.32■□□□□ 0.04
TRIM3-202ENST00000359518 VCX2Q9H322 139 aa15.32■□□□□ 0.04
TRIM3-202ENST00000359518 EIF4EBP3O60516 100 aaPredicted RBP15.31■□□□□ 0.04
TRIM3-202ENST00000359518 C20orf203Q8NBC4 194 aa15.31■□□□□ 0.04
TRIM3-202ENST00000359518 MT-ATP8P03928 68 aa15.31■□□□□ 0.04
TRIM3-202ENST00000359518 ZNF22P17026 224 aaPredicted RBP15.31■□□□□ 0.04
TRIM3-202ENST00000359518 MUSTN1Q8IVN3 82 aa15.31■□□□□ 0.04
TRIM3-202ENST00000359518 BEX4Q9NWD9 120 aaPredicted RBP15.31■□□□□ 0.04
TRIM3-202ENST00000359518 TMEM223A0PJW6 202 aa15.3■□□□□ 0.04
TRIM3-202ENST00000359518 A0A1B0GV72 72 aa15.3■□□□□ 0.04
TRIM3-202ENST00000359518 SCGB1A1P11684 91 aa15.3■□□□□ 0.04
TRIM3-202ENST00000359518 K7EQG2 157 aa15.3■□□□□ 0.04
TRIM3-202ENST00000359518 RHODO00212 210 aa15.29■□□□□ 0.04
TRIM3-202ENST00000359518 Q1RN00 199 aa15.29■□□□□ 0.04
TRIM3-202ENST00000359518 LYRM7Q5U5X0 104 aa15.29■□□□□ 0.04
TRIM3-202ENST00000359518 IGLV4-3A0A075B6K6 122 aa15.29■□□□□ 0.04
TRIM3-202ENST00000359518 A8MWV9 139 aa15.29■□□□□ 0.04
TRIM3-202ENST00000359518 I3L3M4 83 aa15.29■□□□□ 0.04
TRIM3-202ENST00000359518 SONP18583 2426 aaKnown RBP15.28■□□□□ 0.04
TRIM3-202ENST00000359518 TRAV8-3A0A0A6YYJ7 113 aa15.28■□□□□ 0.04
TRIM3-202ENST00000359518 SPINK8P0C7L1 97 aa15.28■□□□□ 0.04
TRIM3-202ENST00000359518 TEN1Q86WV5 123 aa15.28■□□□□ 0.04
TRIM3-202ENST00000359518 RBMY1A1P0DJD3 496 aaKnown RBP15.28■□□□□ 0.04
TRIM3-202ENST00000359518 RBMY1CP0DJD4 496 aa15.28■□□□□ 0.04
TRIM3-202ENST00000359518 CKS1BP61024 79 aa15.28■□□□□ 0.04
TRIM3-202ENST00000359518 RBMY1FQ15415 496 aaKnown RBP15.28■□□□□ 0.04
TRIM3-202ENST00000359518 NSUN5P1Q3KNT7 163 aa15.28■□□□□ 0.04
TRIM3-202ENST00000359518 ANKRD29Q8N6D5 301 aa15.28■□□□□ 0.04
TRIM3-202ENST00000359518 IGSF10Q6WRI0 2623 aa15.28■□□□□ 0.04
TRIM3-202ENST00000359518 C9JAW5 83 aa15.27■□□□□ 0.04
TRIM3-202ENST00000359518 LEPROTO15243 131 aa15.27■□□□□ 0.04
TRIM3-202ENST00000359518 PRSS2P07478 247 aa15.27■□□□□ 0.04
TRIM3-202ENST00000359518 HIST2H2BDQ6DRA6 164 aa15.27■□□□□ 0.04
TRIM3-202ENST00000359518 XGP55808 180 aa15.27■□□□□ 0.04
TRIM3-202ENST00000359518 NPC2P61916 151 aa15.27■□□□□ 0.03
TRIM3-202ENST00000359518 RHOHQ15669 191 aa15.27■□□□□ 0.03
TRIM3-202ENST00000359518 DEFB136Q30KP8 78 aa15.27■□□□□ 0.03
TRIM3-202ENST00000359518 PPDPFLQ8WWR9 84 aa15.27■□□□□ 0.03
TRIM3-202ENST00000359518 A8MZ25 164 aa15.26■□□□□ 0.03
TRIM3-202ENST00000359518 CD28P10747 220 aa15.26■□□□□ 0.03
TRIM3-202ENST00000359518 ATP6V0E2Q8NHE4 81 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms