RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 SLURP1P55000 103 aa2.76□□□□□ -1.97
RNF38-203ENST00000353739 ZNF876PQ49A33 203 aa2.76□□□□□ -1.97
RNF38-203ENST00000353739 FAM74A4Q5TZK3 123 aa2.76□□□□□ -1.97
RNF38-203ENST00000353739 Q6ZVH6 145 aa2.76□□□□□ -1.97
RNF38-203ENST00000353739 PCP2Q8IVA1 136 aa2.76□□□□□ -1.97
RNF38-203ENST00000353739 YAE1D1Q9NRH1 226 aa2.76□□□□□ -1.97
RNF38-203ENST00000353739 TP73-AS1Q9UF72 201 aa2.76□□□□□ -1.97
RNF38-203ENST00000353739 TRAV8-6A0A0B4J262 113 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 DNAJC9-AS1A6NH13 148 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 TMEM238C9JI98 176 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 H3BUT2 72 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 DEFB114Q30KQ6 69 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 SPANXCQ9NY87 97 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 A0A087WWL8 130 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.75□□□□□ -1.97
RNF38-203ENST00000353739 H7C423 109 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 CRYGDP07320 174 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 RPL24P83731 157 aaKnown RBP2.75□□□□□ -1.97
RNF38-203ENST00000353739 BEAN1Q3B7T3 259 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 NEGR1Q7Z3B1 354 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 C20orf203Q8NBC4 194 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 PRADC1Q9BSG0 188 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 TIMM21Q9BVV7 248 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 A0A1B0GWB2 263 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 F8W1H4 67 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 GAS8-AS1O95177 125 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 FHL3Q13643 280 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 NRGNQ92686 78 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 C16orf74Q96GX8 76 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 CHD6Q8TD26 2715 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 USP9YO00507 2555 aaPredicted RBP2.75□□□□□ -1.97
RNF38-203ENST00000353739 TRBV10-1A0A0K0K1A3 114 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 TSHBP01222 138 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 CD28P10747 220 aa2.75□□□□□ -1.97
RNF38-203ENST00000353739 SRSF9Q13242 221 aaKnown RBP eCLIP2.75□□□□□ -1.97
RNF38-203ENST00000353739 CACNA1BQ00975 2339 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 TRAV12-2A0A075B6T6 113 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 KNCNA6PVL3 124 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 J3QKU1 62 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 MRPS36P82909 103 aaKnown RBP2.74□□□□□ -1.97
RNF38-203ENST00000353739 UFSP1Q6NVU6 142 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 Q6ZSV7 163 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 ZNF479Q96JC4 524 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 ZNF462Q96JM2 2506 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 APCP25054 2843 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 IGLV4-69A0A075B6H9 119 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 TRBV7-3A0A075B6L6 115 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 TRAV4A0A0B4J268 109 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 TINCRA0A1B0GVN0 87 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 TMEM223A0PJW6 202 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 CCL24O00175 119 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 IGKV3-20P01619 116 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 DAZ2Q13117 558 aaKnown RBP2.74□□□□□ -1.97
RNF38-203ENST00000353739 C12orf74Q32Q52 190 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 TMEM170BQ5T4T1 132 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 DAZ4Q86SG3 579 aaKnown RBP2.74□□□□□ -1.97
RNF38-203ENST00000353739 DAZ3Q9NR90 486 aaKnown RBP2.74□□□□□ -1.97
RNF38-203ENST00000353739 NHP2Q9NX24 153 aaKnown RBP2.74□□□□□ -1.97
RNF38-203ENST00000353739 A0A1B0GV72 72 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 PRB1P04280 392 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 TMEM263Q8WUH6 116 aaKnown RBP2.74□□□□□ -1.97
RNF38-203ENST00000353739 DLX4Q92988 240 aaPredicted RBP2.74□□□□□ -1.97
RNF38-203ENST00000353739 TENM4Q6N022 2769 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 TRBV20-1A0A075B6N2 111 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 IGKV2D-26A0A0A0MRZ7 120 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 GAGE12BA1L429 117 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 WIPF1O43516 503 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 RRN3P1Q2M238 152 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 NDUFA11Q86Y39 141 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 ATP6V0E2Q8NHE4 81 aa2.74□□□□□ -1.97
RNF38-203ENST00000353739 PTPN13Q12923 2485 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 IGLL5B9A064 214 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 J3QQQ9 107 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 K7EQD1 137 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 TIMM17BO60830 172 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 IGHV3-53P01767 116 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 TCTAP57738 103 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 RPL36AP83881 106 aaKnown RBP2.73□□□□□ -1.97
RNF38-203ENST00000353739 OCIAD2Q56VL3 154 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 CFAP126Q5VTH2 177 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 C10orf99Q6UWK7 81 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 Q6ZQT7 251 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 KRTAP1-3Q8IUG1 177 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 TMEM61Q8N0U2 210 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 IL17DQ8TAD2 202 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 RPL36ALQ969Q0 106 aaKnown RBP2.73□□□□□ -1.97
RNF38-203ENST00000353739 A0A0J9YXY3 114 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 EDN2P20800 178 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 CD300EQ496F6 205 aaPredicted RBP2.73□□□□□ -1.97
RNF38-203ENST00000353739 FAM19A3Q7Z5A8 133 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 RAB37Q96AX2 223 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 TMEM101Q96IK0 257 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 AMELXQ99217 191 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 A0A0B4J2C4 111 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 FXYD2P54710 66 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 DEFB1P60022 68 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 HERVK_113P63121 156 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 CIRBPQ14011 172 aaKnown RBP2.73□□□□□ -1.97
RNF38-203ENST00000353739 SFTA2Q6UW10 78 aa2.73□□□□□ -1.97
RNF38-203ENST00000353739 MAPK1IP1LQ8NDC0 245 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms