RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 BUB1B-PAK6H3BSN5 160 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 ZNF134P52741 427 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 MP68P56378 58 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 AJUBAQ96IF1 538 aa3.91□□□□□ -1.78
SKP1-202ENST00000353411 RPP25Q9BUL9 199 aaKnown RBP3.91□□□□□ -1.78
SKP1-202ENST00000353411 NDPQ00604 133 aa3.9□□□□□ -1.78
SKP1-202ENST00000353411 C17orf58Q2M2W7 97 aa3.9□□□□□ -1.78
SKP1-202ENST00000353411 GAFA1Q96PS6 74 aa3.9□□□□□ -1.78
SKP1-202ENST00000353411 IGHV1OR15-1A0A075B7D0 117 aa3.9□□□□□ -1.79
SKP1-202ENST00000353411 PRB4P10163 310 aaPredicted RBP3.9□□□□□ -1.79
SKP1-202ENST00000353411 ZNF524Q96C55 264 aa3.9□□□□□ -1.79
SKP1-202ENST00000353411 RPL39LQ96EH5 51 aaKnown RBP3.9□□□□□ -1.79
SKP1-202ENST00000353411 FAM223BA6NKX1 122 aa3.9□□□□□ -1.79
SKP1-202ENST00000353411 LINC00322Q6ZN03 302 aaPredicted RBP3.9□□□□□ -1.79
SKP1-202ENST00000353411 FAM223AQ8IWN6 122 aa3.9□□□□□ -1.79
SKP1-202ENST00000353411 SAP25Q8TEE9 199 aa3.9□□□□□ -1.79
SKP1-202ENST00000353411 SND1-IT1Q9HBX3 110 aa3.9□□□□□ -1.79
SKP1-202ENST00000353411 MSRB1Q9NZV6 116 aa3.9□□□□□ -1.79
SKP1-202ENST00000353411 PCSK5Q92824 1860 aa3.9□□□□□ -1.79
SKP1-202ENST00000353411 TRAV7A0A075B6U4 112 aa3.9□□□□□ -1.79
SKP1-202ENST00000353411 IGFL4Q6B9Z1 124 aa3.9□□□□□ -1.79
SKP1-202ENST00000353411 SUMO4Q6EEV6 95 aa3.9□□□□□ -1.79
SKP1-202ENST00000353411 TMEM263Q8WUH6 116 aaKnown RBP3.9□□□□□ -1.79
SKP1-202ENST00000353411 URB1-AS1Q96HZ7 61 aa3.9□□□□□ -1.79
SKP1-202ENST00000353411 FOXE3Q13461 319 aa3.9□□□□□ -1.79
SKP1-202ENST00000353411 IGHV3-30-3P0DP02 117 aa3.89□□□□□ -1.79
SKP1-202ENST00000353411 KIR2DL5BQ8NHK3 375 aa3.89□□□□□ -1.79
SKP1-202ENST00000353411 DEFB104AQ8WTQ1 72 aa3.89□□□□□ -1.79
SKP1-202ENST00000353411 DPH3Q96FX2 82 aa3.89□□□□□ -1.79
SKP1-202ENST00000353411 UBE2BP63146 152 aa3.89□□□□□ -1.79
SKP1-202ENST00000353411 WDR86Q86TI4 376 aa3.89□□□□□ -1.79
SKP1-202ENST00000353411 OPRPNQ99935 248 aaPredicted RBP3.89□□□□□ -1.79
SKP1-202ENST00000353411 IGHV3OR16-12A0A075B7B8 117 aa3.89□□□□□ -1.79
SKP1-202ENST00000353411 SS18Q15532 418 aa3.89□□□□□ -1.79
SKP1-202ENST00000353411 C17orf77Q96MU5 243 aa3.89□□□□□ -1.79
SKP1-202ENST00000353411 PRO0461Q9UI25 63 aa3.89□□□□□ -1.79
SKP1-202ENST00000353411 IGHV1-18A0A0C4DH31 117 aa3.89□□□□□ -1.79
SKP1-202ENST00000353411 A0A0J9YX75 114 aa3.89□□□□□ -1.79
SKP1-202ENST00000353411 B3GALT5-AS1P59052 145 aa3.89□□□□□ -1.79
SKP1-202ENST00000353411 COL4A3Q01955 1670 aa3.89□□□□□ -1.79
SKP1-202ENST00000353411 A0A0J9YXV3 536 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 WI2-2373I1.2A0A1W2PRP0 233 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 LECT2O14960 151 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 IGHV1-46P01743 117 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 MINOS1Q5TGZ0 78 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 ENHOQ6UWT2 76 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 MINOS1-NBL1R4GNA1 71 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 COL5A1P20908 1838 aaPredicted RBP3.88□□□□□ -1.79
SKP1-202ENST00000353411 TRGV2A0A075B6R0 118 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 J3QKU1 62 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 PROP1O75360 226 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 MYCNOSP40205 109 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 USMG5Q96IX5 58 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 SRCAPQ6ZRS2 3230 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 EPOPA6NHQ4 379 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 FAM222AQ5U5X8 452 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 TMEM105Q8N8V8 129 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 C9orf85Q96MD7 179 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 HOXD3P31249 432 aaPredicted RBP3.88□□□□□ -1.79
SKP1-202ENST00000353411 H3BS24 57 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 INSP01308 110 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 C4orf26Q17RF5 130 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 MDFIQ99750 246 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 PYGO1Q9Y3Y4 419 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 TMEM223A0PJW6 202 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 F8WEM9 126 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 NDUFB1O75438 58 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 IGHV3-73A0A0B4J1V6 119 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 KLK5Q9Y337 293 aaPredicted RBP3.88□□□□□ -1.79
SKP1-202ENST00000353411 EP400Q96L91 3159 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 PIK3CD-AS1Q5SR53 167 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 NAV2Q8IVL1 2488 aa3.88□□□□□ -1.79
SKP1-202ENST00000353411 UBE2AP49459 152 aa3.87□□□□□ -1.79
SKP1-202ENST00000353411 C5orf38Q86SI9 138 aa3.87□□□□□ -1.79
SKP1-202ENST00000353411 ZFAND3Q9H8U3 227 aa3.87□□□□□ -1.79
SKP1-202ENST00000353411 POLQO75417 2590 aa3.87□□□□□ -1.79
SKP1-202ENST00000353411 TMEM178BH3BS89 294 aa3.87□□□□□ -1.79
SKP1-202ENST00000353411 RPL39P62891 51 aaKnown RBP3.87□□□□□ -1.79
SKP1-202ENST00000353411 NREPQ16612 68 aa3.87□□□□□ -1.79
SKP1-202ENST00000353411 CD164L2Q6UWJ8 174 aa3.87□□□□□ -1.79
SKP1-202ENST00000353411 C9orf47Q6ZRZ4 202 aa3.87□□□□□ -1.79
SKP1-202ENST00000353411 MIFP14174 115 aa3.86□□□□□ -1.79
SKP1-202ENST00000353411 COL8A2P25067 703 aa3.86□□□□□ -1.79
SKP1-202ENST00000353411 ODF3Q96PU9 254 aa3.86□□□□□ -1.79
SKP1-202ENST00000353411 CCL21O00585 134 aa3.86□□□□□ -1.79
SKP1-202ENST00000353411 EIF4EBP1Q13541 118 aaPredicted RBP3.86□□□□□ -1.79
SKP1-202ENST00000353411 CNFNQ9BYD5 112 aa3.86□□□□□ -1.79
SKP1-202ENST00000353411 RNF185Q96GF1 192 aa3.86□□□□□ -1.79
SKP1-202ENST00000353411 Q9HAA7 133 aa3.86□□□□□ -1.79
SKP1-202ENST00000353411 PROK2Q9HC23 129 aa3.86□□□□□ -1.79
SKP1-202ENST00000353411 CR1P17927 2039 aa3.86□□□□□ -1.79
SKP1-202ENST00000353411 I3L2K1 104 aa3.86□□□□□ -1.79
SKP1-202ENST00000353411 IGKV1-17P01599 117 aa3.86□□□□□ -1.79
SKP1-202ENST00000353411 PRB3Q04118 309 aaPredicted RBP3.86□□□□□ -1.79
SKP1-202ENST00000353411 TRGV4A0A0C4DH28 118 aa3.86□□□□□ -1.79
SKP1-202ENST00000353411 CRIP3Q6Q6R5 217 aa3.86□□□□□ -1.79
SKP1-202ENST00000353411 SBSPONQ8IVN8 264 aa3.86□□□□□ -1.79
SKP1-202ENST00000353411 FASNP49327 2511 aaKnown RBP3.86□□□□□ -1.79
SKP1-202ENST00000353411 ZNF22P17026 224 aaPredicted RBP3.86□□□□□ -1.79
SKP1-202ENST00000353411 Q6ZPA2 131 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms