RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.31□□□□□ -0.28
APP-202ENST00000348990 HRNRQ86YZ3 2850 aaPredicted RBP13.31□□□□□ -0.28
APP-202ENST00000348990 MED14OSP0DP75 135 aa13.31□□□□□ -0.28
APP-202ENST00000348990 CD28P10747 220 aa13.31□□□□□ -0.28
APP-202ENST00000348990 TRAV8-3A0A0A6YYJ7 113 aa13.3□□□□□ -0.28
APP-202ENST00000348990 TMEM263Q8WUH6 116 aaKnown RBP13.3□□□□□ -0.28
APP-202ENST00000348990 RHODO00212 210 aa13.3□□□□□ -0.28
APP-202ENST00000348990 C11orf71Q6IPW1 123 aa13.3□□□□□ -0.28
APP-202ENST00000348990 CEMP1Q6PRD7 247 aaPredicted RBP13.3□□□□□ -0.28
APP-202ENST00000348990 PRRC2AP48634 2157 aaKnown RBP13.3□□□□□ -0.28
APP-202ENST00000348990 IFITM1P13164 125 aa13.29□□□□□ -0.28
APP-202ENST00000348990 SPINK13Q1W4C9 94 aa13.29□□□□□ -0.28
APP-202ENST00000348990 TMEM223A0PJW6 202 aa13.29□□□□□ -0.28
APP-202ENST00000348990 COX6CP09669 75 aa13.29□□□□□ -0.28
APP-202ENST00000348990 ZNF22P17026 224 aaPredicted RBP13.29□□□□□ -0.28
APP-202ENST00000348990 NDUFV3P56181 108 aaKnown RBP13.29□□□□□ -0.28
APP-202ENST00000348990 TIMM21Q9BVV7 248 aa13.29□□□□□ -0.28
APP-202ENST00000348990 H3BMM0 161 aa13.29□□□□□ -0.28
APP-202ENST00000348990 M0R2P5 195 aa13.29□□□□□ -0.28
APP-202ENST00000348990 SOCS3O14543 225 aa13.29□□□□□ -0.28
APP-202ENST00000348990 BLCAPP62952 87 aa13.29□□□□□ -0.28
APP-202ENST00000348990 UBE2WQ96B02 151 aa13.29□□□□□ -0.28
APP-202ENST00000348990 DAZ1Q9NQZ3 744 aaKnown RBP13.29□□□□□ -0.28
APP-202ENST00000348990 BSNQ9UPA5 3926 aa13.29□□□□□ -0.28
APP-202ENST00000348990 NCOR2Q9Y618 2525 aa13.28□□□□□ -0.28
APP-202ENST00000348990 GAGE12JA6NER3 117 aa13.28□□□□□ -0.28
APP-202ENST00000348990 GAGE7O76087 117 aa13.28□□□□□ -0.28
APP-202ENST00000348990 GAGE12FP0CL80 117 aa13.28□□□□□ -0.28
APP-202ENST00000348990 GAGE12GP0CL81 117 aa13.28□□□□□ -0.28
APP-202ENST00000348990 GAGE12IP0CL82 117 aa13.28□□□□□ -0.28
APP-202ENST00000348990 GAGE4Q13068 117 aa13.28□□□□□ -0.28
APP-202ENST00000348990 SBSPONQ8IVN8 264 aa13.28□□□□□ -0.28
APP-202ENST00000348990 TRBV27A0A0K0K1C4 114 aa13.28□□□□□ -0.28
APP-202ENST00000348990 A0A0U1RRA0 63 aa13.28□□□□□ -0.28
APP-202ENST00000348990 CCDC179H3BU77 68 aa13.28□□□□□ -0.28
APP-202ENST00000348990 TRIAP1O43715 76 aa13.28□□□□□ -0.28
APP-202ENST00000348990 ADORA2A-AS1P86434 159 aa13.28□□□□□ -0.28
APP-202ENST00000348990 Q6ZSV7 163 aa13.28□□□□□ -0.28
APP-202ENST00000348990 AMELXQ99217 191 aa13.28□□□□□ -0.28
APP-202ENST00000348990 A0A1W2PPR1 153 aa13.27□□□□□ -0.28
APP-202ENST00000348990 H3BUX3 64 aa13.27□□□□□ -0.28
APP-202ENST00000348990 EIF4EBP3O60516 100 aaPredicted RBP13.27□□□□□ -0.28
APP-202ENST00000348990 A0A0J9YXY3 114 aa13.27□□□□□ -0.29
APP-202ENST00000348990 CLEC2BQ92478 149 aa13.27□□□□□ -0.29
APP-202ENST00000348990 CELSR1Q9NYQ6 3014 aa13.27□□□□□ -0.29
APP-202ENST00000348990 A8MZ25 164 aa13.26□□□□□ -0.29
APP-202ENST00000348990 IGHV3-30-3P0DP02 117 aa13.26□□□□□ -0.29
APP-202ENST00000348990 KNCNA6PVL3 124 aa13.26□□□□□ -0.29
APP-202ENST00000348990 M0QY20 66 aa13.25□□□□□ -0.29
APP-202ENST00000348990 P0DMU3 169 aa13.25□□□□□ -0.29
APP-202ENST00000348990 FAM231AP0DMU4 169 aa13.25□□□□□ -0.29
APP-202ENST00000348990 FAM231CP0DMU5 169 aa13.25□□□□□ -0.29
APP-202ENST00000348990 DAND5Q8N907 189 aa13.25□□□□□ -0.29
APP-202ENST00000348990 C20orf203Q8NBC4 194 aa13.25□□□□□ -0.29
APP-202ENST00000348990 DUX3Q96PT4 197 aa13.25□□□□□ -0.29
APP-202ENST00000348990 A0A0B4J2C4 111 aa13.25□□□□□ -0.29
APP-202ENST00000348990 I3L3M4 83 aa13.25□□□□□ -0.29
APP-202ENST00000348990 C3orf56Q8N813 242 aa13.25□□□□□ -0.29
APP-202ENST00000348990 FBXL19-AS1Q494R0 122 aa13.24□□□□□ -0.29
APP-202ENST00000348990 NDUFA12Q9UI09 145 aa13.24□□□□□ -0.29
APP-202ENST00000348990 LMO4P61968 165 aa13.24□□□□□ -0.29
APP-202ENST00000348990 CITED1Q99966 193 aa13.24□□□□□ -0.29
APP-202ENST00000348990 USMG5Q96IX5 58 aa13.24□□□□□ -0.29
APP-202ENST00000348990 TRBV10-2A0A0K0K1G8 114 aa13.23□□□□□ -0.29
APP-202ENST00000348990 IGLV4-3A0A075B6K6 122 aa13.23□□□□□ -0.29
APP-202ENST00000348990 KLLNB2CW77 178 aa13.23□□□□□ -0.29
APP-202ENST00000348990 TMEM95Q3KNT9 176 aa13.23□□□□□ -0.29
APP-202ENST00000348990 K7ENP7 123 aa13.23□□□□□ -0.29
APP-202ENST00000348990 LGALS9O00182 355 aa13.23□□□□□ -0.29
APP-202ENST00000348990 NHLRC4P0CG21 123 aaPredicted RBP13.23□□□□□ -0.29
APP-202ENST00000348990 RPL32P62910 135 aaKnown RBP13.23□□□□□ -0.29
APP-202ENST00000348990 RHOHQ15669 191 aa13.23□□□□□ -0.29
APP-202ENST00000348990 SMIM20Q8N5G0 67 aa13.23□□□□□ -0.29
APP-202ENST00000348990 ICOSQ9Y6W8 199 aa13.23□□□□□ -0.29
APP-202ENST00000348990 DUX5Q96PT3 197 aa13.22□□□□□ -0.29
APP-202ENST00000348990 IGHV3-16A0A0C4DH30 117 aa13.22□□□□□ -0.29
APP-202ENST00000348990 SNRPD3P62318 126 aaKnown RBP13.22□□□□□ -0.29
APP-202ENST00000348990 FAM19A4Q96LR4 140 aa13.22□□□□□ -0.29
APP-202ENST00000348990 NXPH4O95158 308 aa13.21□□□□□ -0.29
APP-202ENST00000348990 IGHV1-69P01742 117 aa13.21□□□□□ -0.29
APP-202ENST00000348990 TNFRSF18Q9Y5U5 241 aa13.21□□□□□ -0.29
APP-202ENST00000348990 IGHV1OR15-1A0A075B7D0 117 aa13.21□□□□□ -0.29
APP-202ENST00000348990 ZNF625Q96I27 306 aaPredicted RBP13.21□□□□□ -0.29
APP-202ENST00000348990 CHD8Q9HCK8 2581 aa13.21□□□□□ -0.29
APP-202ENST00000348990 PROK1P58294 105 aa13.2□□□□□ -0.3
APP-202ENST00000348990 IGHV4-38-2P0DP08 117 aa13.2□□□□□ -0.3
APP-202ENST00000348990 ADAMTSL4-AS1Q5T5F5 129 aa13.2□□□□□ -0.3
APP-202ENST00000348990 USP9YO00507 2555 aaPredicted RBP13.19□□□□□ -0.3
APP-202ENST00000348990 TRBV6-5A0A0K0K1A5 114 aa13.19□□□□□ -0.3
APP-202ENST00000348990 HERV-K104P63124 156 aa13.19□□□□□ -0.3
APP-202ENST00000348990 NSUN5P1Q3KNT7 163 aa13.19□□□□□ -0.3
APP-202ENST00000348990 SHISA2Q6UWI4 295 aa13.19□□□□□ -0.3
APP-202ENST00000348990 RPL13AP40429 203 aaKnown RBP13.18□□□□□ -0.3
APP-202ENST00000348990 ODF3Q96PU9 254 aa13.18□□□□□ -0.3
APP-202ENST00000348990 IGHV3-38A0A0C4DH36 116 aa13.18□□□□□ -0.3
APP-202ENST00000348990 PRM2P04554 102 aa13.18□□□□□ -0.3
APP-202ENST00000348990 POM121L12Q8N7R1 296 aa13.18□□□□□ -0.3
APP-202ENST00000348990 H7C423 109 aa13.18□□□□□ -0.3
APP-202ENST00000348990 DGAT2L7PQ6IED9 249 aa13.18□□□□□ -0.3
APP-202ENST00000348990 TRBV7-9A0A0J9YWB2 115 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 249.8 ms