RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 SMKR1H3BMG3 65 aa9.66□□□□□ -0.86
TPM4-202ENST00000344824 NCR2O95944 276 aa9.66□□□□□ -0.86
TPM4-202ENST00000344824 RAB4AP20338 218 aa9.66□□□□□ -0.86
TPM4-202ENST00000344824 MRPL51Q4U2R6 128 aaKnown RBP9.66□□□□□ -0.86
TPM4-202ENST00000344824 LINC00612Q8N6U2 182 aa9.66□□□□□ -0.86
TPM4-202ENST00000344824 C15orf53Q8NAA6 179 aa9.66□□□□□ -0.86
TPM4-202ENST00000344824 A0A0J9YY99 117 aa9.65□□□□□ -0.86
TPM4-202ENST00000344824 LCE2AQ5TA79 106 aaPredicted RBP9.65□□□□□ -0.86
TPM4-202ENST00000344824 BIRC6Q9NR09 4857 aa9.65□□□□□ -0.86
TPM4-202ENST00000344824 TRGV4A0A0C4DH28 118 aa9.65□□□□□ -0.87
TPM4-202ENST00000344824 RHODO00212 210 aa9.65□□□□□ -0.87
TPM4-202ENST00000344824 LINC00315P59091 139 aa9.65□□□□□ -0.87
TPM4-202ENST00000344824 SUMO4Q6EEV6 95 aa9.65□□□□□ -0.87
TPM4-202ENST00000344824 DNAH10Q8IVF4 4471 aa9.64□□□□□ -0.87
TPM4-202ENST00000344824 IGLV2-18A0A075B6J9 118 aa9.64□□□□□ -0.87
TPM4-202ENST00000344824 TRAV26-1A0A087WT03 109 aa9.64□□□□□ -0.87
TPM4-202ENST00000344824 D6R8Y8 96 aa9.64□□□□□ -0.87
TPM4-202ENST00000344824 M0R2N4 97 aa9.64□□□□□ -0.87
TPM4-202ENST00000344824 GAS8-AS1O95177 125 aa9.64□□□□□ -0.87
TPM4-202ENST00000344824 GATA1P15976 413 aaPredicted RBP9.64□□□□□ -0.87
TPM4-202ENST00000344824 CKS2P33552 79 aa9.64□□□□□ -0.87
TPM4-202ENST00000344824 UFSP1Q6NVU6 142 aa9.64□□□□□ -0.87
TPM4-202ENST00000344824 Q6ZSN1 163 aa9.64□□□□□ -0.87
TPM4-202ENST00000344824 FRAS1Q86XX4 4008 aa9.63□□□□□ -0.87
TPM4-202ENST00000344824 HOXA5P20719 270 aa9.63□□□□□ -0.87
TPM4-202ENST00000344824 ZFP2Q6ZN57 461 aa9.63□□□□□ -0.87
TPM4-202ENST00000344824 SRIP30626 198 aa9.62□□□□□ -0.87
TPM4-202ENST00000344824 RPL39LQ96EH5 51 aaKnown RBP9.62□□□□□ -0.87
TPM4-202ENST00000344824 MRAP2Q96G30 205 aa9.62□□□□□ -0.87
TPM4-202ENST00000344824 C1orf196B1AJZ1 125 aa9.61□□□□□ -0.87
TPM4-202ENST00000344824 FHL2Q14192 279 aa9.61□□□□□ -0.87
TPM4-202ENST00000344824 ORMDL3Q8N138 153 aa9.61□□□□□ -0.87
TPM4-202ENST00000344824 PRELID3AQ96N28 172 aa9.61□□□□□ -0.87
TPM4-202ENST00000344824 C18orf15Q96N68 181 aa9.61□□□□□ -0.87
TPM4-202ENST00000344824 K7EQD1 137 aa9.59□□□□□ -0.87
TPM4-202ENST00000344824 PHOX2AO14813 284 aa9.59□□□□□ -0.87
TPM4-202ENST00000344824 NPYP01303 97 aa9.59□□□□□ -0.87
TPM4-202ENST00000344824 OR10J3Q5JRS4 329 aa9.59□□□□□ -0.87
TPM4-202ENST00000344824 ALKBH7Q9BT30 221 aaPredicted RBP9.59□□□□□ -0.87
TPM4-202ENST00000344824 H7C1H1 209 aa9.58□□□□□ -0.88
TPM4-202ENST00000344824 M0QY20 66 aa9.58□□□□□ -0.88
TPM4-202ENST00000344824 CIDEAO60543 219 aa9.58□□□□□ -0.88
TPM4-202ENST00000344824 PPBPP02775 128 aa9.58□□□□□ -0.88
TPM4-202ENST00000344824 CCL18P55774 89 aa9.58□□□□□ -0.88
TPM4-202ENST00000344824 IQCJQ1A5X6 159 aa9.58□□□□□ -0.88
TPM4-202ENST00000344824 SLC25A29Q8N8R3 303 aa9.58□□□□□ -0.88
TPM4-202ENST00000344824 Q9UF83 564 aa9.58□□□□□ -0.88
TPM4-202ENST00000344824 HHLA3Q9XRX5 114 aa9.58□□□□□ -0.88
TPM4-202ENST00000344824 TMA7Q9Y2S6 64 aaKnown RBP9.58□□□□□ -0.88
TPM4-202ENST00000344824 LOC100131303A0A0U1RQF7 123 aa9.57□□□□□ -0.88
TPM4-202ENST00000344824 LOC389332A0A1B0GUA5 103 aa9.57□□□□□ -0.88
TPM4-202ENST00000344824 TNFRSF6BO95407 300 aa9.57□□□□□ -0.88
TPM4-202ENST00000344824 NRACQ8N912 160 aa9.57□□□□□ -0.88
TPM4-202ENST00000344824 GAGE12JA6NER3 117 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 PAX4O43316 350 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 RAB5BP61020 215 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 GAGE1Q13065 139 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 GAGE4Q13068 117 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 GAGE5Q13069 117 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 RHOHQ15669 191 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 GAGE13Q4V321 117 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 C4orf48Q5BLP8 95 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 NEXN-AS1Q8NBZ9 246 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 PRADC1Q9BSG0 188 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 PRO0255Q9UI72 69 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 TRBV6-4A0A1B0GX49 114 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 HIST1H2BKO60814 126 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 HIST1H2BJP06899 126 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 HIST1H2BOP23527 126 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 HIST1H2BBP33778 126 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 CRYBA4P53673 196 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 HIST1H2BDP58876 126 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 HIST1H2BCP62807 126 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 HIST2H2BEQ16778 126 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.56□□□□□ -0.88
TPM4-202ENST00000344824 LCE2CQ5TA81 110 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 NEGR1Q7Z3B1 354 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 DEFB104AQ8WTQ1 72 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 HIST1H2BHQ93079 126 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 HIST1H2BNQ99877 126 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 HIST1H2BMQ99879 126 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 MAP1LC3AQ9H492 121 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 ST20Q9HBF5 79 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 NIT2Q9NQR4 276 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 LINC00588Q9Y4M8 146 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 TNFRSF18Q9Y5U5 241 aa9.56□□□□□ -0.88
TPM4-202ENST00000344824 DNAH2Q9P225 4427 aa9.55□□□□□ -0.88
TPM4-202ENST00000344824 A0A096LPF7 62 aa9.55□□□□□ -0.88
TPM4-202ENST00000344824 GYPEP15421 78 aa9.55□□□□□ -0.88
TPM4-202ENST00000344824 ZNRF2Q8NHG8 242 aa9.55□□□□□ -0.88
TPM4-202ENST00000344824 C18orf32Q8TCD1 76 aa9.55□□□□□ -0.88
TPM4-202ENST00000344824 VSIG2Q96IQ7 327 aa9.55□□□□□ -0.88
TPM4-202ENST00000344824 ICOSQ9Y6W8 199 aa9.55□□□□□ -0.88
TPM4-202ENST00000344824 PPP1R17O96001 155 aa9.54□□□□□ -0.88
TPM4-202ENST00000344824 SUMO2P61956 95 aaKnown RBP9.54□□□□□ -0.88
TPM4-202ENST00000344824 RPL36AP83881 106 aaKnown RBP9.54□□□□□ -0.88
TPM4-202ENST00000344824 RPL36ALQ969Q0 106 aaKnown RBP9.54□□□□□ -0.88
TPM4-202ENST00000344824 LAMTOR2Q9Y2Q5 125 aa9.54□□□□□ -0.88
TPM4-202ENST00000344824 IGHV3-38A0A0C4DH36 116 aa9.53□□□□□ -0.88
TPM4-202ENST00000344824 TRBV10-1A0A0K0K1A3 114 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms