RNA–Protein interactions for RNA: ENST00000341990.8

CNTNAP3B-202, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-202ENST00000341990 IGHV1OR15-1A0A075B7D0 117 aa14.74□□□□□ -0.05
CNTNAP3B-202ENST00000341990 PSMB2P49721 201 aa14.74□□□□□ -0.05
CNTNAP3B-202ENST00000341990 NDUFA11Q86Y39 141 aa14.74□□□□□ -0.05
CNTNAP3B-202ENST00000341990 ZFYVE26Q68DK2 2539 aa14.74□□□□□ -0.05
CNTNAP3B-202ENST00000341990 IGHV3-30P01768 117 aa14.73□□□□□ -0.05
CNTNAP3B-202ENST00000341990 IGHV3-30-5P0DP03 117 aa14.73□□□□□ -0.05
CNTNAP3B-202ENST00000341990 HTN1P15515 57 aa14.73□□□□□ -0.05
CNTNAP3B-202ENST00000341990 J3QQQ9 107 aa14.73□□□□□ -0.05
CNTNAP3B-202ENST00000341990 SYT8Q8NBV8 401 aa14.73□□□□□ -0.05
CNTNAP3B-202ENST00000341990 DLX4Q92988 240 aaPredicted RBP14.73□□□□□ -0.05
CNTNAP3B-202ENST00000341990 CFAP126Q5VTH2 177 aa14.72□□□□□ -0.05
CNTNAP3B-202ENST00000341990 SIGMAR1Q99720 223 aa14.72□□□□□ -0.05
CNTNAP3B-202ENST00000341990 LRRK2Q5S007 2527 aa14.72□□□□□ -0.05
CNTNAP3B-202ENST00000341990 IGHV3-73A0A0B4J1V6 119 aa14.72□□□□□ -0.05
CNTNAP3B-202ENST00000341990 PRM2P04554 102 aa14.72□□□□□ -0.05
CNTNAP3B-202ENST00000341990 CFC1BP0CG36 223 aa14.72□□□□□ -0.05
CNTNAP3B-202ENST00000341990 CFC1P0CG37 223 aa14.72□□□□□ -0.05
CNTNAP3B-202ENST00000341990 SLC25A29Q8N8R3 303 aa14.72□□□□□ -0.05
CNTNAP3B-202ENST00000341990 ZNF418Q8TF45 676 aaPredicted RBP14.72□□□□□ -0.05
CNTNAP3B-202ENST00000341990 J3QR89 54 aa14.71□□□□□ -0.05
CNTNAP3B-202ENST00000341990 TGFAP01135 160 aa14.71□□□□□ -0.05
CNTNAP3B-202ENST00000341990 ODF3Q96PU9 254 aa14.71□□□□□ -0.05
CNTNAP3B-202ENST00000341990 ZNF580Q9UK33 172 aa14.71□□□□□ -0.05
CNTNAP3B-202ENST00000341990 RBMY1A1P0DJD3 496 aaKnown RBP14.71□□□□□ -0.05
CNTNAP3B-202ENST00000341990 RBMY1CP0DJD4 496 aa14.71□□□□□ -0.05
CNTNAP3B-202ENST00000341990 RBMY1FQ15415 496 aaKnown RBP14.71□□□□□ -0.05
CNTNAP3B-202ENST00000341990 PTH2Q96A98 100 aa14.71□□□□□ -0.05
CNTNAP3B-202ENST00000341990 UBE2D3P61077 147 aa14.7□□□□□ -0.06
CNTNAP3B-202ENST00000341990 UBE2D2P62837 147 aa14.7□□□□□ -0.06
CNTNAP3B-202ENST00000341990 NSUN5P1Q3KNT7 163 aa14.7□□□□□ -0.06
CNTNAP3B-202ENST00000341990 PTPN13Q12923 2485 aa14.7□□□□□ -0.06
CNTNAP3B-202ENST00000341990 TRPT1Q86TN4 253 aaKnown RBP14.69□□□□□ -0.06
CNTNAP3B-202ENST00000341990 NFE4Q86UQ8 179 aa14.69□□□□□ -0.06
CNTNAP3B-202ENST00000341990 TEX15Q9BXT5 2789 aa14.69□□□□□ -0.06
CNTNAP3B-202ENST00000341990 ABCA12Q86UK0 2595 aa14.69□□□□□ -0.06
CNTNAP3B-202ENST00000341990 LGALS3P17931 250 aaKnown RBP14.69□□□□□ -0.06
CNTNAP3B-202ENST00000341990 PROK1P58294 105 aa14.69□□□□□ -0.06
CNTNAP3B-202ENST00000341990 C20orf203Q8NBC4 194 aa14.69□□□□□ -0.06
CNTNAP3B-202ENST00000341990 A0A0J9YXV3 536 aa14.68□□□□□ -0.06
CNTNAP3B-202ENST00000341990 HOXD3P31249 432 aaPredicted RBP14.68□□□□□ -0.06
CNTNAP3B-202ENST00000341990 SPATA25Q9BR10 227 aa14.68□□□□□ -0.06
CNTNAP3B-202ENST00000341990 KNCNA6PVL3 124 aa14.68□□□□□ -0.06
CNTNAP3B-202ENST00000341990 TLN2Q9Y4G6 2542 aa14.67□□□□□ -0.06
CNTNAP3B-202ENST00000341990 TMEM223A0PJW6 202 aa14.67□□□□□ -0.06
CNTNAP3B-202ENST00000341990 TCL1BO95988 128 aa14.67□□□□□ -0.06
CNTNAP3B-202ENST00000341990 RHOHQ15669 191 aa14.67□□□□□ -0.06
CNTNAP3B-202ENST00000341990 Q9UF83 564 aa14.67□□□□□ -0.06
CNTNAP3B-202ENST00000341990 EIF4EBP3O60516 100 aaPredicted RBP14.67□□□□□ -0.06
CNTNAP3B-202ENST00000341990 ZNF22P17026 224 aaPredicted RBP14.67□□□□□ -0.06
CNTNAP3B-202ENST00000341990 I3L3M4 83 aa14.66□□□□□ -0.06
CNTNAP3B-202ENST00000341990 DEFB136Q30KP8 78 aa14.66□□□□□ -0.06
CNTNAP3B-202ENST00000341990 C1QTNF4Q9BXJ3 329 aa14.66□□□□□ -0.06
CNTNAP3B-202ENST00000341990 IGLV4-3A0A075B6K6 122 aa14.66□□□□□ -0.06
CNTNAP3B-202ENST00000341990 FOXI1Q12951 378 aa14.66□□□□□ -0.06
CNTNAP3B-202ENST00000341990 CEMP1Q6PRD7 247 aaPredicted RBP14.66□□□□□ -0.06
CNTNAP3B-202ENST00000341990 C18orf65Q6ZTR6 163 aa14.66□□□□□ -0.06
CNTNAP3B-202ENST00000341990 C10orf126Q8N4M7 172 aa14.65□□□□□ -0.06
CNTNAP3B-202ENST00000341990 A4D1N5 150 aa14.64□□□□□ -0.07
CNTNAP3B-202ENST00000341990 RHODO00212 210 aa14.64□□□□□ -0.07
CNTNAP3B-202ENST00000341990 RNASE13Q5GAN3 156 aaKnown RBP14.64□□□□□ -0.07
CNTNAP3B-202ENST00000341990 RAX2Q96IS3 184 aa14.64□□□□□ -0.07
CNTNAP3B-202ENST00000341990 TRAV2A0A0B4J234 112 aa14.63□□□□□ -0.07
CNTNAP3B-202ENST00000341990 ADARB2-AS1A8MUL3 147 aa14.63□□□□□ -0.07
CNTNAP3B-202ENST00000341990 LEPROTO15243 131 aa14.63□□□□□ -0.07
CNTNAP3B-202ENST00000341990 TCTEX1D4Q5JR98 221 aa14.63□□□□□ -0.07
CNTNAP3B-202ENST00000341990 VCX2Q9H322 139 aa14.63□□□□□ -0.07
CNTNAP3B-202ENST00000341990 GATA3P23771 443 aa14.63□□□□□ -0.07
CNTNAP3B-202ENST00000341990 LINC01356Q8N9X3 169 aa14.63□□□□□ -0.07
CNTNAP3B-202ENST00000341990 FAM104AQ969W3 186 aa14.63□□□□□ -0.07
CNTNAP3B-202ENST00000341990 PRO1854Q9UHT4 67 aa14.63□□□□□ -0.07
CNTNAP3B-202ENST00000341990 FHL3Q13643 280 aa14.62□□□□□ -0.07
CNTNAP3B-202ENST00000341990 HIST2H2BDQ6DRA6 164 aa14.62□□□□□ -0.07
CNTNAP3B-202ENST00000341990 H7C2G1 150 aa14.62□□□□□ -0.07
CNTNAP3B-202ENST00000341990 SLURP1P55000 103 aa14.62□□□□□ -0.07
CNTNAP3B-202ENST00000341990 NACAE9PAV3 2078 aa14.62□□□□□ -0.07
CNTNAP3B-202ENST00000341990 CHD6Q8TD26 2715 aa14.62□□□□□ -0.07
CNTNAP3B-202ENST00000341990 NAV2Q8IVL1 2488 aa14.61□□□□□ -0.07
CNTNAP3B-202ENST00000341990 TRGV11A0A075B6L2 103 aa14.61□□□□□ -0.07
CNTNAP3B-202ENST00000341990 DEFB131AP59861 70 aa14.61□□□□□ -0.07
CNTNAP3B-202ENST00000341990 SPXQ9BT56 116 aa14.61□□□□□ -0.07
CNTNAP3B-202ENST00000341990 ZNF702PQ9H963 129 aa14.61□□□□□ -0.07
CNTNAP3B-202ENST00000341990 BEX4Q9NWD9 120 aaPredicted RBP14.61□□□□□ -0.07
CNTNAP3B-202ENST00000341990 ZNF462Q96JM2 2506 aa14.61□□□□□ -0.07
CNTNAP3B-202ENST00000341990 TMEM89A2RUT3 159 aa14.6□□□□□ -0.07
CNTNAP3B-202ENST00000341990 SCGB1C2P0DMR2 95 aa14.6□□□□□ -0.07
CNTNAP3B-202ENST00000341990 DUX3Q96PT4 197 aa14.6□□□□□ -0.07
CNTNAP3B-202ENST00000341990 VPREB3Q9UKI3 123 aa14.6□□□□□ -0.07
CNTNAP3B-202ENST00000341990 EPG5Q9HCE0 2579 aa14.6□□□□□ -0.07
CNTNAP3B-202ENST00000341990 A0A096LNT2 108 aa14.6□□□□□ -0.07
CNTNAP3B-202ENST00000341990 MUSTN1Q8IVN3 82 aa14.6□□□□□ -0.07
CNTNAP3B-202ENST00000341990 ZNF469Q96JG9 3925 aaPredicted RBP14.6□□□□□ -0.07
CNTNAP3B-202ENST00000341990 RBMY1BA6NDE4 496 aaKnown RBP14.59□□□□□ -0.07
CNTNAP3B-202ENST00000341990 RBMY1EA6NEQ0 496 aaKnown RBP14.59□□□□□ -0.07
CNTNAP3B-202ENST00000341990 RBMY1DP0C7P1 496 aaKnown RBP14.59□□□□□ -0.07
CNTNAP3B-202ENST00000341990 Q6ZSN1 163 aa14.59□□□□□ -0.07
CNTNAP3B-202ENST00000341990 CARD19Q96LW7 228 aa14.59□□□□□ -0.07
CNTNAP3B-202ENST00000341990 PRRC2AP48634 2157 aaKnown RBP14.59□□□□□ -0.07
CNTNAP3B-202ENST00000341990 CD28P10747 220 aa14.59□□□□□ -0.07
CNTNAP3B-202ENST00000341990 NF1P21359 2839 aa14.59□□□□□ -0.07
CNTNAP3B-202ENST00000341990 TRAV8-3A0A0A6YYJ7 113 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms