RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 C12orf74Q32Q52 190 aa13.05□□□□□ -0.32
LRCH3-201ENST00000334859 PAPPA-AS1Q5QFB9 102 aa13.05□□□□□ -0.32
LRCH3-201ENST00000334859 SONP18583 2426 aaKnown RBP13.04□□□□□ -0.32
LRCH3-201ENST00000334859 TMEM61Q8N0U2 210 aa13.04□□□□□ -0.32
LRCH3-201ENST00000334859 VPS25Q9BRG1 176 aa13.04□□□□□ -0.32
LRCH3-201ENST00000334859 PEMTQ9UBM1 199 aa13.04□□□□□ -0.32
LRCH3-201ENST00000334859 TMEM170BQ5T4T1 132 aa13.04□□□□□ -0.32
LRCH3-201ENST00000334859 HIST2H2BDQ6DRA6 164 aa13.04□□□□□ -0.32
LRCH3-201ENST00000334859 Q8N2B8 174 aa13.04□□□□□ -0.32
LRCH3-201ENST00000334859 ITPR3Q14573 2671 aa13.04□□□□□ -0.32
LRCH3-201ENST00000334859 KLHL30-AS1Q8NEE0 82 aa13.03□□□□□ -0.32
LRCH3-201ENST00000334859 IGHV3-73A0A0B4J1V6 119 aa13.02□□□□□ -0.32
LRCH3-201ENST00000334859 SAP30O75446 220 aa13.02□□□□□ -0.32
LRCH3-201ENST00000334859 RHOHQ15669 191 aa13.02□□□□□ -0.32
LRCH3-201ENST00000334859 NSUN5P1Q3KNT7 163 aa13.02□□□□□ -0.32
LRCH3-201ENST00000334859 LRRC75A-AS1Q8N1F1 130 aa13.02□□□□□ -0.32
LRCH3-201ENST00000334859 DYNLRB2Q8TF09 96 aa13.02□□□□□ -0.32
LRCH3-201ENST00000334859 C4orf3Q8WVX3 66 aa13.02□□□□□ -0.32
LRCH3-201ENST00000334859 ZNF479Q96JC4 524 aa13.02□□□□□ -0.32
LRCH3-201ENST00000334859 IGLL5B9A064 214 aa13.02□□□□□ -0.33
LRCH3-201ENST00000334859 H3BMM0 161 aa13.02□□□□□ -0.33
LRCH3-201ENST00000334859 PCP4P48539 62 aa13.02□□□□□ -0.33
LRCH3-201ENST00000334859 C21orf62-AS1Q17RA5 79 aa13.02□□□□□ -0.33
LRCH3-201ENST00000334859 PLEKHB2Q96CS7 222 aa13.02□□□□□ -0.33
LRCH3-201ENST00000334859 RBMY1BA6NDE4 496 aaKnown RBP13.01□□□□□ -0.33
LRCH3-201ENST00000334859 RBMY1EA6NEQ0 496 aaKnown RBP13.01□□□□□ -0.33
LRCH3-201ENST00000334859 RBMY1DP0C7P1 496 aaKnown RBP13.01□□□□□ -0.33
LRCH3-201ENST00000334859 OPRPNQ99935 248 aaPredicted RBP13.01□□□□□ -0.33
LRCH3-201ENST00000334859 CHD6Q8TD26 2715 aa13.01□□□□□ -0.33
LRCH3-201ENST00000334859 I3L3M4 83 aa13.01□□□□□ -0.33
LRCH3-201ENST00000334859 PRM2P04554 102 aa13□□□□□ -0.33
LRCH3-201ENST00000334859 ZNRF2Q8NHG8 242 aa13□□□□□ -0.33
LRCH3-201ENST00000334859 DLX4Q92988 240 aaPredicted RBP13□□□□□ -0.33
LRCH3-201ENST00000334859 SRSF9Q13242 221 aaKnown RBP eCLIP13□□□□□ -0.33
LRCH3-201ENST00000334859 CCDC168Q8NDH2 2452 aa12.99□□□□□ -0.33
LRCH3-201ENST00000334859 ZNF469Q96JG9 3925 aaPredicted RBP12.99□□□□□ -0.33
LRCH3-201ENST00000334859 P0DMU3 169 aa12.99□□□□□ -0.33
LRCH3-201ENST00000334859 FAM231AP0DMU4 169 aa12.99□□□□□ -0.33
LRCH3-201ENST00000334859 FAM231CP0DMU5 169 aa12.99□□□□□ -0.33
LRCH3-201ENST00000334859 C20orf203Q8NBC4 194 aa12.99□□□□□ -0.33
LRCH3-201ENST00000334859 MAP6D1Q9H9H5 199 aa12.98□□□□□ -0.33
LRCH3-201ENST00000334859 FLNAP21333 2647 aaKnown RBP12.98□□□□□ -0.33
LRCH3-201ENST00000334859 TSPEAR-AS2P59090 65 aa12.97□□□□□ -0.33
LRCH3-201ENST00000334859 KRTAP1-3Q8IUG1 177 aa12.97□□□□□ -0.33
LRCH3-201ENST00000334859 NF1P21359 2839 aa12.97□□□□□ -0.33
LRCH3-201ENST00000334859 TRAV2A0A0B4J234 112 aa12.97□□□□□ -0.33
LRCH3-201ENST00000334859 A0A1B0GWB2 263 aa12.97□□□□□ -0.33
LRCH3-201ENST00000334859 A8MTW9 85 aa12.97□□□□□ -0.33
LRCH3-201ENST00000334859 PROK1P58294 105 aa12.97□□□□□ -0.33
LRCH3-201ENST00000334859 RRN3P1Q2M238 152 aa12.97□□□□□ -0.33
LRCH3-201ENST00000334859 TMEM238LA0A1B0GVL6 79 aa12.96□□□□□ -0.33
LRCH3-201ENST00000334859 A6NJY4 79 aa12.96□□□□□ -0.33
LRCH3-201ENST00000334859 ZNF415Q09FC8 603 aa12.96□□□□□ -0.34
LRCH3-201ENST00000334859 RAX2Q96IS3 184 aa12.96□□□□□ -0.34
LRCH3-201ENST00000334859 M0R2P5 195 aa12.95□□□□□ -0.34
LRCH3-201ENST00000334859 C11orf44Q8N8P7 122 aa12.95□□□□□ -0.34
LRCH3-201ENST00000334859 A0A0J9YY99 117 aa12.94□□□□□ -0.34
LRCH3-201ENST00000334859 A8MWV9 139 aa12.94□□□□□ -0.34
LRCH3-201ENST00000334859 DEFB114Q30KQ6 69 aa12.94□□□□□ -0.34
LRCH3-201ENST00000334859 NFE4Q86UQ8 179 aa12.94□□□□□ -0.34
LRCH3-201ENST00000334859 LINC01587Q99440 93 aa12.94□□□□□ -0.34
LRCH3-201ENST00000334859 SPAG8Q99932 426 aaPredicted RBP12.94□□□□□ -0.34
LRCH3-201ENST00000334859 TNFRSF18Q9Y5U5 241 aa12.94□□□□□ -0.34
LRCH3-201ENST00000334859 WNK1Q9H4A3 2382 aa12.94□□□□□ -0.34
LRCH3-201ENST00000334859 SETD2Q9BYW2 2564 aaPredicted RBP12.94□□□□□ -0.34
LRCH3-201ENST00000334859 IGLV4-3A0A075B6K6 122 aa12.93□□□□□ -0.34
LRCH3-201ENST00000334859 J3QQQ9 107 aa12.93□□□□□ -0.34
LRCH3-201ENST00000334859 LGALS3P17931 250 aaKnown RBP12.93□□□□□ -0.34
LRCH3-201ENST00000334859 Q6ZSV7 163 aa12.93□□□□□ -0.34
LRCH3-201ENST00000334859 VCX2Q9H322 139 aa12.93□□□□□ -0.34
LRCH3-201ENST00000334859 MRPL16Q9NX20 251 aaKnown RBP12.93□□□□□ -0.34
LRCH3-201ENST00000334859 PGPEP1Q9NXJ5 209 aa12.93□□□□□ -0.34
LRCH3-201ENST00000334859 A0A1W2PRX2 142 aa12.93□□□□□ -0.34
LRCH3-201ENST00000334859 H3BMG7 143 aa12.93□□□□□ -0.34
LRCH3-201ENST00000334859 RPL24P83731 157 aaKnown RBP12.93□□□□□ -0.34
LRCH3-201ENST00000334859 WFDC11Q8NEX6 87 aa12.93□□□□□ -0.34
LRCH3-201ENST00000334859 DNAJC9-AS1A6NH13 148 aa12.92□□□□□ -0.34
LRCH3-201ENST00000334859 INSP01308 110 aa12.92□□□□□ -0.34
LRCH3-201ENST00000334859 CD28P10747 220 aa12.92□□□□□ -0.34
LRCH3-201ENST00000334859 AKAP9Q99996 3911 aa12.92□□□□□ -0.34
LRCH3-201ENST00000334859 IGHV3-64A0A075B6Q5 118 aa12.92□□□□□ -0.34
LRCH3-201ENST00000334859 EDA2RQ9HAV5 297 aa12.92□□□□□ -0.34
LRCH3-201ENST00000334859 NACAE9PAV3 2078 aa12.92□□□□□ -0.34
LRCH3-201ENST00000334859 NBPF19A0A087WUL8 3843 aa12.91□□□□□ -0.34
LRCH3-201ENST00000334859 A0A0J9YXV3 536 aa12.91□□□□□ -0.34
LRCH3-201ENST00000334859 TMEM86BQ8N661 226 aa12.91□□□□□ -0.34
LRCH3-201ENST00000334859 Q9UF83 564 aa12.91□□□□□ -0.34
LRCH3-201ENST00000334859 TENM4Q6N022 2769 aa12.9□□□□□ -0.34
LRCH3-201ENST00000334859 TMEM223A0PJW6 202 aa12.9□□□□□ -0.34
LRCH3-201ENST00000334859 G3V4G9 280 aa12.9□□□□□ -0.34
LRCH3-201ENST00000334859 APOMO95445 188 aa12.9□□□□□ -0.34
LRCH3-201ENST00000334859 CFAP126Q5VTH2 177 aa12.9□□□□□ -0.34
LRCH3-201ENST00000334859 Q6ZSN1 163 aa12.9□□□□□ -0.34
LRCH3-201ENST00000334859 RHODO00212 210 aa12.9□□□□□ -0.35
LRCH3-201ENST00000334859 ZNF22P17026 224 aaPredicted RBP12.9□□□□□ -0.35
LRCH3-201ENST00000334859 UBE2D1P51668 147 aa12.9□□□□□ -0.35
LRCH3-201ENST00000334859 AMELXQ99217 191 aa12.9□□□□□ -0.35
LRCH3-201ENST00000334859 XCL2Q9UBD3 114 aa12.9□□□□□ -0.35
LRCH3-201ENST00000334859 CEMP1Q6PRD7 247 aaPredicted RBP12.89□□□□□ -0.35
LRCH3-201ENST00000334859 C11orf72Q8NBR9 251 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms