RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ZNF80P51504 273 aaPredicted RBP9.42□□□□□ -0.9
DDX39A-202ENST00000324340 PCP2Q8IVA1 136 aa9.42□□□□□ -0.9
DDX39A-202ENST00000324340 NAA38Q9BRA0 125 aaKnown RBP9.42□□□□□ -0.9
DDX39A-202ENST00000324340 NXT2Q9NPJ8 142 aaKnown RBP9.42□□□□□ -0.9
DDX39A-202ENST00000324340 TENM1Q9UKZ4 2725 aa9.41□□□□□ -0.9
DDX39A-202ENST00000324340 WNK1Q9H4A3 2382 aa9.41□□□□□ -0.9
DDX39A-202ENST00000324340 TRBV25-1A0A075B6N4 114 aa9.41□□□□□ -0.9
DDX39A-202ENST00000324340 KLLNB2CW77 178 aa9.41□□□□□ -0.9
DDX39A-202ENST00000324340 H3BMM0 161 aa9.41□□□□□ -0.9
DDX39A-202ENST00000324340 M0QXV9 152 aa9.41□□□□□ -0.9
DDX39A-202ENST00000324340 DPM2O94777 84 aa9.41□□□□□ -0.9
DDX39A-202ENST00000324340 FCER1GP30273 86 aa9.41□□□□□ -0.9
DDX39A-202ENST00000324340 FOXI1Q12951 378 aa9.41□□□□□ -0.9
DDX39A-202ENST00000324340 TWIST1Q15672 202 aa9.41□□□□□ -0.9
DDX39A-202ENST00000324340 C12orf74Q32Q52 190 aa9.41□□□□□ -0.9
DDX39A-202ENST00000324340 AMTNQ6UX39 209 aa9.41□□□□□ -0.9
DDX39A-202ENST00000324340 C19orf73Q9NVV2 129 aa9.41□□□□□ -0.9
DDX39A-202ENST00000324340 HHLA3Q9XRX5 114 aa9.41□□□□□ -0.9
DDX39A-202ENST00000324340 KNCNA6PVL3 124 aa9.4□□□□□ -0.9
DDX39A-202ENST00000324340 FABP5P3A8MUU1 101 aa9.4□□□□□ -0.9
DDX39A-202ENST00000324340 SH2D1AO60880 128 aa9.4□□□□□ -0.9
DDX39A-202ENST00000324340 IGKCP01834 107 aa9.4□□□□□ -0.9
DDX39A-202ENST00000324340 ODF1Q14990 250 aa9.4□□□□□ -0.9
DDX39A-202ENST00000324340 PRR9Q5T870 116 aa9.4□□□□□ -0.9
DDX39A-202ENST00000324340 NHP2Q9NX24 153 aaKnown RBP9.4□□□□□ -0.9
DDX39A-202ENST00000324340 PGPEP1Q9NXJ5 209 aa9.4□□□□□ -0.9
DDX39A-202ENST00000324340 ATRQ13535 2644 aa9.4□□□□□ -0.91
DDX39A-202ENST00000324340 D6R8Y8 96 aa9.39□□□□□ -0.91
DDX39A-202ENST00000324340 APOMO95445 188 aa9.39□□□□□ -0.91
DDX39A-202ENST00000324340 CD7P09564 240 aa9.39□□□□□ -0.91
DDX39A-202ENST00000324340 SPINK8P0C7L1 97 aa9.39□□□□□ -0.91
DDX39A-202ENST00000324340 LEPP41159 167 aa9.39□□□□□ -0.91
DDX39A-202ENST00000324340 GAGE5Q13069 117 aa9.39□□□□□ -0.91
DDX39A-202ENST00000324340 GAGE6Q13070 117 aa9.39□□□□□ -0.91
DDX39A-202ENST00000324340 ETDBQ3ZM63 59 aa9.39□□□□□ -0.91
DDX39A-202ENST00000324340 MAP1LC3AQ9H492 121 aa9.39□□□□□ -0.91
DDX39A-202ENST00000324340 PPDPFLQ8WWR9 84 aa9.38□□□□□ -0.91
DDX39A-202ENST00000324340 MDFIQ99750 246 aa9.38□□□□□ -0.91
DDX39A-202ENST00000324340 CDIP1Q9H305 208 aa9.38□□□□□ -0.91
DDX39A-202ENST00000324340 TRAV21A0A0B4J279 112 aa9.37□□□□□ -0.91
DDX39A-202ENST00000324340 RBMY1BA6NDE4 496 aaKnown RBP9.37□□□□□ -0.91
DDX39A-202ENST00000324340 RBMY1EA6NEQ0 496 aaKnown RBP9.37□□□□□ -0.91
DDX39A-202ENST00000324340 RBMY1DP0C7P1 496 aaKnown RBP9.37□□□□□ -0.91
DDX39A-202ENST00000324340 TRPT1Q86TN4 253 aaKnown RBP9.37□□□□□ -0.91
DDX39A-202ENST00000324340 PLNP26678 52 aa9.37□□□□□ -0.91
DDX39A-202ENST00000324340 MRPL51Q4U2R6 128 aaKnown RBP9.37□□□□□ -0.91
DDX39A-202ENST00000324340 PRR31Q5SQ13 230 aa9.37□□□□□ -0.91
DDX39A-202ENST00000324340 CFAP126Q5VTH2 177 aa9.37□□□□□ -0.91
DDX39A-202ENST00000324340 Q6ZUT4 128 aa9.37□□□□□ -0.91
DDX39A-202ENST00000324340 ZNF575Q86XF7 245 aa9.37□□□□□ -0.91
DDX39A-202ENST00000324340 SBSPONQ8IVN8 264 aa9.37□□□□□ -0.91
DDX39A-202ENST00000324340 FBN3Q75N90 2809 aa9.36□□□□□ -0.91
DDX39A-202ENST00000324340 TRBV7-3A0A075B6L6 115 aa9.36□□□□□ -0.91
DDX39A-202ENST00000324340 TRBV20-1A0A075B6N2 111 aa9.36□□□□□ -0.91
DDX39A-202ENST00000324340 IGKV3D-20A0A0C4DH25 116 aa9.36□□□□□ -0.91
DDX39A-202ENST00000324340 IGKV3-20P01619 116 aa9.36□□□□□ -0.91
DDX39A-202ENST00000324340 CKS2P33552 79 aa9.36□□□□□ -0.91
DDX39A-202ENST00000324340 RNASE4P34096 147 aaKnown RBP9.36□□□□□ -0.91
DDX39A-202ENST00000324340 SPINK13Q1W4C9 94 aa9.36□□□□□ -0.91
DDX39A-202ENST00000324340 SH2D6Q7Z4S9 175 aa9.36□□□□□ -0.91
DDX39A-202ENST00000324340 STHQ8IWL8 128 aa9.36□□□□□ -0.91
DDX39A-202ENST00000324340 C18orf15Q96N68 181 aa9.36□□□□□ -0.91
DDX39A-202ENST00000324340 CNFNQ9BYD5 112 aa9.36□□□□□ -0.91
DDX39A-202ENST00000324340 C11orf21Q9P2W6 132 aa9.36□□□□□ -0.91
DDX39A-202ENST00000324340 DKK2Q9UBU2 259 aa9.36□□□□□ -0.91
DDX39A-202ENST00000324340 TIMM8BQ9Y5J9 83 aaPredicted RBP9.36□□□□□ -0.91
DDX39A-202ENST00000324340 TRAV12-1A0A0B4J245 112 aa9.35□□□□□ -0.91
DDX39A-202ENST00000324340 J3KRW8 73 aa9.35□□□□□ -0.91
DDX39A-202ENST00000324340 ASIPP42127 132 aa9.35□□□□□ -0.91
DDX39A-202ENST00000324340 Q6Q795 121 aa9.35□□□□□ -0.91
DDX39A-202ENST00000324340 Q6ZQT7 251 aa9.35□□□□□ -0.91
DDX39A-202ENST00000324340 GTSCR1Q86UQ5 136 aa9.35□□□□□ -0.91
DDX39A-202ENST00000324340 SYT8Q8NBV8 401 aa9.35□□□□□ -0.91
DDX39A-202ENST00000324340 AGRNO00468 2067 aa9.34□□□□□ -0.91
DDX39A-202ENST00000324340 IGKV2D-26A0A0A0MRZ7 120 aa9.34□□□□□ -0.91
DDX39A-202ENST00000324340 ORM1P02763 201 aa9.34□□□□□ -0.91
DDX39A-202ENST00000324340 ZFAND6Q6FIF0 208 aa9.34□□□□□ -0.91
DDX39A-202ENST00000324340 LYZL1Q6UWQ5 148 aa9.34□□□□□ -0.91
DDX39A-202ENST00000324340 TEN1Q86WV5 123 aa9.34□□□□□ -0.91
DDX39A-202ENST00000324340 Q8N8P6 123 aa9.34□□□□□ -0.91
DDX39A-202ENST00000324340 WFDC10AQ9H1F0 79 aa9.34□□□□□ -0.91
DDX39A-202ENST00000324340 TRAV12-2A0A075B6T6 113 aa9.33□□□□□ -0.92
DDX39A-202ENST00000324340 LOC389332A0A1B0GUA5 103 aa9.33□□□□□ -0.92
DDX39A-202ENST00000324340 K7ERJ3 54 aa9.33□□□□□ -0.92
DDX39A-202ENST00000324340 IGLC6P0CF74 106 aa9.33□□□□□ -0.92
DDX39A-202ENST00000324340 EGFEM1PQ0D2K5 195 aa9.33□□□□□ -0.92
DDX39A-202ENST00000324340 Q8N1Y9 231 aa9.33□□□□□ -0.92
DDX39A-202ENST00000324340 LINC01600Q96MT4 127 aa9.33□□□□□ -0.92
DDX39A-202ENST00000324340 ANAPC13Q9BS18 74 aa9.33□□□□□ -0.92
DDX39A-202ENST00000324340 SORL1Q92673 2214 aa9.32□□□□□ -0.92
DDX39A-202ENST00000324340 A0A087WX48 190 aa9.32□□□□□ -0.92
DDX39A-202ENST00000324340 TRAV12-3A0A0B4J271 114 aa9.32□□□□□ -0.92
DDX39A-202ENST00000324340 NPYP01303 97 aa9.32□□□□□ -0.92
DDX39A-202ENST00000324340 PRSS1P07477 247 aa9.32□□□□□ -0.92
DDX39A-202ENST00000324340 ZC2HC1BQ5TFG8 222 aa9.32□□□□□ -0.92
DDX39A-202ENST00000324340 AMN1Q8IY45 258 aa9.32□□□□□ -0.92
DDX39A-202ENST00000324340 HIST1H4GQ99525 98 aa9.32□□□□□ -0.92
DDX39A-202ENST00000324340 C20orf78Q9BR46 151 aa9.32□□□□□ -0.92
DDX39A-202ENST00000324340 SPANXDQ9BXN6 97 aa9.32□□□□□ -0.92
DDX39A-202ENST00000324340 TMSB15BA0A087X1C1 80 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms