RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 JMJD1CQ15652 2540 aa14.74□□□□□ -0.05
CRLF3-201ENST00000324238 SYNJ2BPP57105 145 aa14.73□□□□□ -0.05
CRLF3-201ENST00000324238 CEMP1Q6PRD7 247 aaPredicted RBP14.73□□□□□ -0.05
CRLF3-201ENST00000324238 UBE2D1P51668 147 aa14.73□□□□□ -0.05
CRLF3-201ENST00000324238 APRG1Q8IVJ8 170 aa14.73□□□□□ -0.05
CRLF3-201ENST00000324238 ZNF469Q96JG9 3925 aaPredicted RBP14.72□□□□□ -0.05
CRLF3-201ENST00000324238 MTORP42345 2549 aa14.72□□□□□ -0.05
CRLF3-201ENST00000324238 KNCNA6PVL3 124 aa14.72□□□□□ -0.05
CRLF3-201ENST00000324238 J3QR89 54 aa14.72□□□□□ -0.05
CRLF3-201ENST00000324238 IGLV1-40P01703 118 aa14.72□□□□□ -0.05
CRLF3-201ENST00000324238 CFC1BP0CG36 223 aa14.72□□□□□ -0.05
CRLF3-201ENST00000324238 CFC1P0CG37 223 aa14.72□□□□□ -0.05
CRLF3-201ENST00000324238 NDUFA11Q86Y39 141 aa14.72□□□□□ -0.05
CRLF3-201ENST00000324238 DLX4Q92988 240 aaPredicted RBP14.72□□□□□ -0.05
CRLF3-201ENST00000324238 ACANP16112 2415 aa14.72□□□□□ -0.05
CRLF3-201ENST00000324238 PRRC2AP48634 2157 aaKnown RBP14.72□□□□□ -0.05
CRLF3-201ENST00000324238 IGHV4OR15-8A0A075B7B6 117 aa14.72□□□□□ -0.05
CRLF3-201ENST00000324238 A0A087WW49 117 aa14.72□□□□□ -0.05
CRLF3-201ENST00000324238 SYT8Q8NBV8 401 aa14.72□□□□□ -0.05
CRLF3-201ENST00000324238 IGHV3-16A0A0C4DH30 117 aa14.71□□□□□ -0.05
CRLF3-201ENST00000324238 TCL1BO95988 128 aa14.71□□□□□ -0.05
CRLF3-201ENST00000324238 SCGB1C2P0DMR2 95 aa14.71□□□□□ -0.05
CRLF3-201ENST00000324238 ID1P41134 155 aa14.71□□□□□ -0.05
CRLF3-201ENST00000324238 HERVK_113P61574 105 aa14.71□□□□□ -0.05
CRLF3-201ENST00000324238 CFAP126Q5VTH2 177 aa14.71□□□□□ -0.05
CRLF3-201ENST00000324238 A0A0J9YXV3 536 aa14.7□□□□□ -0.06
CRLF3-201ENST00000324238 TMEM238LA0A1B0GVL6 79 aa14.7□□□□□ -0.06
CRLF3-201ENST00000324238 A6NJY4 79 aa14.7□□□□□ -0.06
CRLF3-201ENST00000324238 J3QQQ9 107 aa14.7□□□□□ -0.06
CRLF3-201ENST00000324238 DEFB136Q30KP8 78 aa14.7□□□□□ -0.06
CRLF3-201ENST00000324238 ZNF876PQ49A33 203 aa14.7□□□□□ -0.06
CRLF3-201ENST00000324238 DUX3Q96PT4 197 aa14.7□□□□□ -0.06
CRLF3-201ENST00000324238 TRAV2A0A0B4J234 112 aa14.7□□□□□ -0.06
CRLF3-201ENST00000324238 NXPH4O95158 308 aa14.7□□□□□ -0.06
CRLF3-201ENST00000324238 MED14OSP0DP75 135 aa14.7□□□□□ -0.06
CRLF3-201ENST00000324238 M0QY20 66 aa14.7□□□□□ -0.06
CRLF3-201ENST00000324238 PPP1R17O96001 155 aa14.7□□□□□ -0.06
CRLF3-201ENST00000324238 FHL3Q13643 280 aa14.7□□□□□ -0.06
CRLF3-201ENST00000324238 IGHV3-30P01768 117 aa14.69□□□□□ -0.06
CRLF3-201ENST00000324238 IGHV3-30-5P0DP03 117 aa14.69□□□□□ -0.06
CRLF3-201ENST00000324238 FOXI1Q12951 378 aa14.69□□□□□ -0.06
CRLF3-201ENST00000324238 BEX4Q9NWD9 120 aaPredicted RBP14.69□□□□□ -0.06
CRLF3-201ENST00000324238 LGALS3P17931 250 aaKnown RBP14.69□□□□□ -0.06
CRLF3-201ENST00000324238 ATP6V0BQ99437 205 aa14.68□□□□□ -0.06
CRLF3-201ENST00000324238 B4DSR2 109 aa14.68□□□□□ -0.06
CRLF3-201ENST00000324238 LINC01619G3V211 115 aa14.67□□□□□ -0.06
CRLF3-201ENST00000324238 AMELXQ99217 191 aa14.67□□□□□ -0.06
CRLF3-201ENST00000324238 SPXQ9BT56 116 aa14.67□□□□□ -0.06
CRLF3-201ENST00000324238 A0A0J9YX75 114 aa14.67□□□□□ -0.06
CRLF3-201ENST00000324238 TRBV27A0A0K0K1C4 114 aa14.67□□□□□ -0.06
CRLF3-201ENST00000324238 A4D1N5 150 aa14.67□□□□□ -0.06
CRLF3-201ENST00000324238 EIF4EBP3O60516 100 aaPredicted RBP14.67□□□□□ -0.06
CRLF3-201ENST00000324238 NPC2P61916 151 aa14.67□□□□□ -0.06
CRLF3-201ENST00000324238 TRPT1Q86TN4 253 aaKnown RBP14.67□□□□□ -0.06
CRLF3-201ENST00000324238 POM121L12Q8N7R1 296 aa14.67□□□□□ -0.06
CRLF3-201ENST00000324238 A8MZ25 164 aa14.66□□□□□ -0.06
CRLF3-201ENST00000324238 C18orf65Q6ZTR6 163 aa14.66□□□□□ -0.06
CRLF3-201ENST00000324238 SLC25A29Q8N8R3 303 aa14.66□□□□□ -0.06
CRLF3-201ENST00000324238 CARD19Q96LW7 228 aa14.65□□□□□ -0.06
CRLF3-201ENST00000324238 SPATA25Q9BR10 227 aa14.65□□□□□ -0.06
CRLF3-201ENST00000324238 C1QTNF4Q9BXJ3 329 aa14.65□□□□□ -0.06
CRLF3-201ENST00000324238 RBMY1A1P0DJD3 496 aaKnown RBP14.65□□□□□ -0.06
CRLF3-201ENST00000324238 RBMY1CP0DJD4 496 aa14.65□□□□□ -0.06
CRLF3-201ENST00000324238 CFHR3Q02985 330 aa14.65□□□□□ -0.06
CRLF3-201ENST00000324238 RBMY1FQ15415 496 aaKnown RBP14.65□□□□□ -0.06
CRLF3-201ENST00000324238 IGHV1OR15-1A0A075B7D0 117 aa14.64□□□□□ -0.07
CRLF3-201ENST00000324238 LGALS9O00182 355 aa14.64□□□□□ -0.07
CRLF3-201ENST00000324238 TMEM141Q96I45 108 aa14.64□□□□□ -0.07
CRLF3-201ENST00000324238 C9orf85Q96MD7 179 aa14.64□□□□□ -0.07
CRLF3-201ENST00000324238 TIMM17AQ99595 171 aa14.64□□□□□ -0.07
CRLF3-201ENST00000324238 NBPF19A0A087WUL8 3843 aa14.64□□□□□ -0.07
CRLF3-201ENST00000324238 TRAV8-3A0A0A6YYJ7 113 aa14.64□□□□□ -0.07
CRLF3-201ENST00000324238 PSMB8P28062 276 aa14.64□□□□□ -0.07
CRLF3-201ENST00000324238 KHDC1LQ5JSQ8 128 aa14.64□□□□□ -0.07
CRLF3-201ENST00000324238 H3BUA1 57 aa14.64□□□□□ -0.07
CRLF3-201ENST00000324238 MT-ATP8P03928 68 aa14.64□□□□□ -0.07
CRLF3-201ENST00000324238 UBE2D3P61077 147 aa14.64□□□□□ -0.07
CRLF3-201ENST00000324238 SNRPD3P62318 126 aaKnown RBP14.64□□□□□ -0.07
CRLF3-201ENST00000324238 UBE2D2P62837 147 aa14.64□□□□□ -0.07
CRLF3-201ENST00000324238 ELANEP08246 267 aa14.63□□□□□ -0.07
CRLF3-201ENST00000324238 MUSTN1Q8IVN3 82 aa14.63□□□□□ -0.07
CRLF3-201ENST00000324238 CDIP1Q9H305 208 aa14.62□□□□□ -0.07
CRLF3-201ENST00000324238 PRSS2P07478 247 aa14.61□□□□□ -0.07
CRLF3-201ENST00000324238 ZNF22P17026 224 aaPredicted RBP14.61□□□□□ -0.07
CRLF3-201ENST00000324238 C10orf126Q8N4M7 172 aa14.61□□□□□ -0.07
CRLF3-201ENST00000324238 VCX2Q9H322 139 aa14.61□□□□□ -0.07
CRLF3-201ENST00000324238 PRO1854Q9UHT4 67 aa14.61□□□□□ -0.07
CRLF3-201ENST00000324238 KRTAP10-9P60411 292 aa14.61□□□□□ -0.07
CRLF3-201ENST00000324238 PAPPA-AS1Q5QFB9 102 aa14.61□□□□□ -0.07
CRLF3-201ENST00000324238 IGHV3-38A0A0C4DH36 116 aa14.61□□□□□ -0.07
CRLF3-201ENST00000324238 Q6ZSV7 163 aa14.61□□□□□ -0.07
CRLF3-201ENST00000324238 C11orf44Q8N8P7 122 aa14.61□□□□□ -0.07
CRLF3-201ENST00000324238 TRBV7-9A0A0J9YWB2 115 aa14.6□□□□□ -0.07
CRLF3-201ENST00000324238 K7EQG2 157 aa14.6□□□□□ -0.07
CRLF3-201ENST00000324238 Q1RN00 199 aa14.6□□□□□ -0.07
CRLF3-201ENST00000324238 C20orf203Q8NBC4 194 aa14.6□□□□□ -0.07
CRLF3-201ENST00000324238 K7EMT4 169 aa14.6□□□□□ -0.07
CRLF3-201ENST00000324238 APCP25054 2843 aa14.59□□□□□ -0.07
CRLF3-201ENST00000324238 IGLV4-3A0A075B6K6 122 aa14.59□□□□□ -0.07
CRLF3-201ENST00000324238 TMEM223A0PJW6 202 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms