RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 C1QTNF4Q9BXJ3 329 aa6.43□□□□□ -1.38
CLK1-201ENST00000321356 EDA2RQ9HAV5 297 aa6.43□□□□□ -1.38
CLK1-201ENST00000321356 LEPROTO15243 131 aa6.42□□□□□ -1.38
CLK1-201ENST00000321356 IGKV3-20P01619 116 aa6.42□□□□□ -1.38
CLK1-201ENST00000321356 FOXI1Q12951 378 aa6.42□□□□□ -1.38
CLK1-201ENST00000321356 SPINK13Q1W4C9 94 aa6.42□□□□□ -1.38
CLK1-201ENST00000321356 DEFB112Q30KQ8 113 aa6.42□□□□□ -1.38
CLK1-201ENST00000321356 C10orf126Q8N4M7 172 aa6.42□□□□□ -1.38
CLK1-201ENST00000321356 DOPEY2Q9Y3R5 2298 aa6.42□□□□□ -1.38
CLK1-201ENST00000321356 UTP20O75691 2785 aaKnown RBP6.42□□□□□ -1.38
CLK1-201ENST00000321356 LOC107984156A0A0G2JMH3 177 aa6.41□□□□□ -1.38
CLK1-201ENST00000321356 I3L3M4 83 aa6.41□□□□□ -1.38
CLK1-201ENST00000321356 ZNF22P17026 224 aaPredicted RBP6.41□□□□□ -1.38
CLK1-201ENST00000321356 LGALS3P17931 250 aaKnown RBP6.41□□□□□ -1.38
CLK1-201ENST00000321356 SBSPONQ8IVN8 264 aa6.41□□□□□ -1.38
CLK1-201ENST00000321356 ARL17AQ8IVW1 177 aa6.41□□□□□ -1.38
CLK1-201ENST00000321356 OPRPNQ99935 248 aaPredicted RBP6.41□□□□□ -1.38
CLK1-201ENST00000321356 ZANQ9Y493 2812 aa6.41□□□□□ -1.38
CLK1-201ENST00000321356 IGLV4-3A0A075B6K6 122 aa6.41□□□□□ -1.38
CLK1-201ENST00000321356 TRGV11A0A075B6L2 103 aa6.41□□□□□ -1.38
CLK1-201ENST00000321356 TRBV20-1A0A075B6N2 111 aa6.41□□□□□ -1.38
CLK1-201ENST00000321356 RHODO00212 210 aa6.41□□□□□ -1.38
CLK1-201ENST00000321356 PSMB2P49721 201 aa6.41□□□□□ -1.38
CLK1-201ENST00000321356 SYNJ2BPP57105 145 aa6.41□□□□□ -1.38
CLK1-201ENST00000321356 DSCR9P59020 149 aa6.41□□□□□ -1.38
CLK1-201ENST00000321356 SMAGPQ0VAQ4 97 aa6.41□□□□□ -1.38
CLK1-201ENST00000321356 MXRA5Q9NR99 2828 aa6.41□□□□□ -1.38
CLK1-201ENST00000321356 IGSF10Q6WRI0 2623 aa6.4□□□□□ -1.38
CLK1-201ENST00000321356 A8MTW9 85 aa6.4□□□□□ -1.39
CLK1-201ENST00000321356 TCL1BO95988 128 aa6.4□□□□□ -1.39
CLK1-201ENST00000321356 SFTA2Q6UW10 78 aa6.4□□□□□ -1.39
CLK1-201ENST00000321356 FAM104AQ969W3 186 aa6.4□□□□□ -1.39
CLK1-201ENST00000321356 PRO1854Q9UHT4 67 aa6.4□□□□□ -1.39
CLK1-201ENST00000321356 PYGO1Q9Y3Y4 419 aa6.4□□□□□ -1.39
CLK1-201ENST00000321356 A0A096LNT2 108 aa6.39□□□□□ -1.39
CLK1-201ENST00000321356 EIF4EBP3O60516 100 aaPredicted RBP6.39□□□□□ -1.39
CLK1-201ENST00000321356 ELANEP08246 267 aa6.39□□□□□ -1.39
CLK1-201ENST00000321356 RBMY1A1P0DJD3 496 aaKnown RBP6.39□□□□□ -1.39
CLK1-201ENST00000321356 RBMY1CP0DJD4 496 aa6.39□□□□□ -1.39
CLK1-201ENST00000321356 RBMY1FQ15415 496 aaKnown RBP6.39□□□□□ -1.39
CLK1-201ENST00000321356 USP9YO00507 2555 aaPredicted RBP6.39□□□□□ -1.39
CLK1-201ENST00000321356 A0A0J9YXV3 536 aa6.39□□□□□ -1.39
CLK1-201ENST00000321356 J3QLI3 93 aa6.39□□□□□ -1.39
CLK1-201ENST00000321356 HOXD3P31249 432 aaPredicted RBP6.39□□□□□ -1.39
CLK1-201ENST00000321356 CRYBA4P53673 196 aa6.39□□□□□ -1.39
CLK1-201ENST00000321356 TEN1Q86WV5 123 aa6.39□□□□□ -1.39
CLK1-201ENST00000321356 LINC01356Q8N9X3 169 aa6.39□□□□□ -1.39
CLK1-201ENST00000321356 UBE2E2Q96LR5 201 aa6.39□□□□□ -1.39
CLK1-201ENST00000321356 CDIP1Q9H305 208 aa6.39□□□□□ -1.39
CLK1-201ENST00000321356 VCX2Q9H322 139 aa6.39□□□□□ -1.39
CLK1-201ENST00000321356 PIEZO1Q92508 2521 aa6.38□□□□□ -1.39
CLK1-201ENST00000321356 SORL1Q92673 2214 aa6.38□□□□□ -1.39
CLK1-201ENST00000321356 A0A0B4J2C4 111 aa6.38□□□□□ -1.39
CLK1-201ENST00000321356 A4D1N5 150 aa6.38□□□□□ -1.39
CLK1-201ENST00000321356 IGHV3-33P01772 117 aa6.38□□□□□ -1.39
CLK1-201ENST00000321356 Q5PR19 223 aa6.38□□□□□ -1.39
CLK1-201ENST00000321356 PIK3CD-AS1Q5SR53 167 aa6.38□□□□□ -1.39
CLK1-201ENST00000321356 ZNF418Q8TF45 676 aaPredicted RBP6.38□□□□□ -1.39
CLK1-201ENST00000321356 TMEM263Q8WUH6 116 aaKnown RBP6.38□□□□□ -1.39
CLK1-201ENST00000321356 PPDPFLQ8WWR9 84 aa6.38□□□□□ -1.39
CLK1-201ENST00000321356 CARD19Q96LW7 228 aa6.38□□□□□ -1.39
CLK1-201ENST00000321356 CREBBPQ92793 2442 aa6.38□□□□□ -1.39
CLK1-201ENST00000321356 ANKRD17O75179 2603 aaKnown RBP6.38□□□□□ -1.39
CLK1-201ENST00000321356 MYO18BQ8IUG5 2567 aa6.38□□□□□ -1.39
CLK1-201ENST00000321356 NACAE9PAV3 2078 aa6.38□□□□□ -1.39
CLK1-201ENST00000321356 CACNA1AO00555 2505 aa6.37□□□□□ -1.39
CLK1-201ENST00000321356 M0QXV9 152 aa6.37□□□□□ -1.39
CLK1-201ENST00000321356 M0R2P5 195 aa6.37□□□□□ -1.39
CLK1-201ENST00000321356 FSHBP01225 129 aa6.37□□□□□ -1.39
CLK1-201ENST00000321356 MRPS36P82909 103 aaKnown RBP6.37□□□□□ -1.39
CLK1-201ENST00000321356 PTH2Q96A98 100 aa6.37□□□□□ -1.39
CLK1-201ENST00000321356 ZNF702PQ9H963 129 aa6.37□□□□□ -1.39
CLK1-201ENST00000321356 VPREB3Q9UKI3 123 aa6.37□□□□□ -1.39
CLK1-201ENST00000321356 A0A0J9YXY3 114 aa6.36□□□□□ -1.39
CLK1-201ENST00000321356 FHL3Q13643 280 aa6.36□□□□□ -1.39
CLK1-201ENST00000321356 RBMY1BA6NDE4 496 aaKnown RBP6.36□□□□□ -1.39
CLK1-201ENST00000321356 RBMY1EA6NEQ0 496 aaKnown RBP6.36□□□□□ -1.39
CLK1-201ENST00000321356 A8MWV9 139 aa6.36□□□□□ -1.39
CLK1-201ENST00000321356 RBMY1DP0C7P1 496 aaKnown RBP6.36□□□□□ -1.39
CLK1-201ENST00000321356 IGHV3-30-3P0DP02 117 aa6.36□□□□□ -1.39
CLK1-201ENST00000321356 TCTEX1D4Q5JR98 221 aa6.36□□□□□ -1.39
CLK1-201ENST00000321356 MUSTN1Q8IVN3 82 aa6.36□□□□□ -1.39
CLK1-201ENST00000321356 NRGNQ92686 78 aa6.36□□□□□ -1.39
CLK1-201ENST00000321356 DUX5Q96PT3 197 aa6.36□□□□□ -1.39
CLK1-201ENST00000321356 LITAFQ99732 161 aa6.36□□□□□ -1.39
CLK1-201ENST00000321356 FBN2P35556 2912 aa6.35□□□□□ -1.39
CLK1-201ENST00000321356 IGHV3-64A0A075B6Q5 118 aa6.35□□□□□ -1.39
CLK1-201ENST00000321356 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.35□□□□□ -1.39
CLK1-201ENST00000321356 TRAV2A0A0B4J234 112 aa6.35□□□□□ -1.39
CLK1-201ENST00000321356 KNCNA6PVL3 124 aa6.35□□□□□ -1.39
CLK1-201ENST00000321356 H3BMM0 161 aa6.35□□□□□ -1.39
CLK1-201ENST00000321356 CD28P10747 220 aa6.35□□□□□ -1.39
CLK1-201ENST00000321356 Q6YL49 198 aa6.35□□□□□ -1.39
CLK1-201ENST00000321356 TIMM21Q9BVV7 248 aa6.35□□□□□ -1.39
CLK1-201ENST00000321356 CENPEQ02224 2701 aa6.35□□□□□ -1.39
CLK1-201ENST00000321356 CIDEAO60543 219 aa6.34□□□□□ -1.39
CLK1-201ENST00000321356 PROK1P58294 105 aa6.34□□□□□ -1.39
CLK1-201ENST00000321356 DEFB131AP59861 70 aa6.34□□□□□ -1.39
CLK1-201ENST00000321356 LINC01600Q96MT4 127 aa6.34□□□□□ -1.39
CLK1-201ENST00000321356 ERG28Q9UKR5 140 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms