RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 MRPL16Q9NX20 251 aaKnown RBP12.85□□□□□ -0.35
RAB39A-201ENST00000320578 TENM1Q9UKZ4 2725 aa12.85□□□□□ -0.35
RAB39A-201ENST00000320578 IGHV3-53P01767 116 aa12.85□□□□□ -0.35
RAB39A-201ENST00000320578 C3orf56Q8N813 242 aa12.85□□□□□ -0.35
RAB39A-201ENST00000320578 PLAC8L1A1L4L8 177 aa12.84□□□□□ -0.35
RAB39A-201ENST00000320578 DNAJC30Q96LL9 226 aa12.84□□□□□ -0.35
RAB39A-201ENST00000320578 SMIM9A6NGZ8 99 aa12.83□□□□□ -0.35
RAB39A-201ENST00000320578 DDTP30046 118 aa12.83□□□□□ -0.35
RAB39A-201ENST00000320578 PAM16Q9Y3D7 125 aa12.83□□□□□ -0.35
RAB39A-201ENST00000320578 TRAV4A0A0B4J268 109 aa12.83□□□□□ -0.36
RAB39A-201ENST00000320578 RIPPLY3P57055 190 aa12.83□□□□□ -0.36
RAB39A-201ENST00000320578 RHOHQ15669 191 aa12.83□□□□□ -0.36
RAB39A-201ENST00000320578 C12orf54Q6X4T0 127 aa12.83□□□□□ -0.36
RAB39A-201ENST00000320578 TRGV1A0A0A0MS02 117 aa12.82□□□□□ -0.36
RAB39A-201ENST00000320578 SPATA45Q537H7 98 aa12.82□□□□□ -0.36
RAB39A-201ENST00000320578 LINC00587B1AMM8 73 aa12.81□□□□□ -0.36
RAB39A-201ENST00000320578 I3L3M4 83 aa12.81□□□□□ -0.36
RAB39A-201ENST00000320578 APOC4P55056 127 aa12.81□□□□□ -0.36
RAB39A-201ENST00000320578 OR4C5Q8NGB2 326 aa12.81□□□□□ -0.36
RAB39A-201ENST00000320578 C2orf66Q6UXQ4 117 aa12.81□□□□□ -0.36
RAB39A-201ENST00000320578 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.8□□□□□ -0.36
RAB39A-201ENST00000320578 ATOH7Q8N100 152 aa12.8□□□□□ -0.36
RAB39A-201ENST00000320578 C18orf15Q96N68 181 aa12.8□□□□□ -0.36
RAB39A-201ENST00000320578 NOP10Q9NPE3 64 aaKnown RBP12.8□□□□□ -0.36
RAB39A-201ENST00000320578 ZMAT5Q9UDW3 170 aaKnown RBP12.8□□□□□ -0.36
RAB39A-201ENST00000320578 CYSLTR1Q9Y271 337 aa12.8□□□□□ -0.36
RAB39A-201ENST00000320578 IGHV3-73A0A0B4J1V6 119 aa12.79□□□□□ -0.36
RAB39A-201ENST00000320578 Q6ZTI0 123 aa12.79□□□□□ -0.36
RAB39A-201ENST00000320578 ERASQ7Z444 233 aa12.79□□□□□ -0.36
RAB39A-201ENST00000320578 MIEN1Q9BRT3 115 aa12.79□□□□□ -0.36
RAB39A-201ENST00000320578 ZMAT4Q9H898 229 aa12.79□□□□□ -0.36
RAB39A-201ENST00000320578 TNFRSF18Q9Y5U5 241 aa12.79□□□□□ -0.36
RAB39A-201ENST00000320578 VWFP04275 2813 aa12.79□□□□□ -0.36
RAB39A-201ENST00000320578 TRAV12-1A0A0B4J245 112 aa12.78□□□□□ -0.36
RAB39A-201ENST00000320578 HSBP1L1C9JCN9 74 aa12.78□□□□□ -0.36
RAB39A-201ENST00000320578 H0Y8G0 127 aa12.78□□□□□ -0.36
RAB39A-201ENST00000320578 PRSS1P07477 247 aa12.78□□□□□ -0.36
RAB39A-201ENST00000320578 Q6ZSN1 163 aa12.78□□□□□ -0.36
RAB39A-201ENST00000320578 NEGR1Q7Z3B1 354 aa12.78□□□□□ -0.36
RAB39A-201ENST00000320578 SCGB3A1Q96QR1 104 aa12.78□□□□□ -0.36
RAB39A-201ENST00000320578 TRBV10-1A0A0K0K1A3 114 aa12.78□□□□□ -0.36
RAB39A-201ENST00000320578 TSHBP01222 138 aa12.77□□□□□ -0.37
RAB39A-201ENST00000320578 ODF1Q14990 250 aa12.77□□□□□ -0.37
RAB39A-201ENST00000320578 NEXN-AS1Q8NBZ9 246 aa12.77□□□□□ -0.37
RAB39A-201ENST00000320578 NOTCH3Q9UM47 2321 aa12.77□□□□□ -0.37
RAB39A-201ENST00000320578 IGLC3P0DOY3 106 aa12.76□□□□□ -0.37
RAB39A-201ENST00000320578 EGFEM1PQ0D2K5 195 aa12.76□□□□□ -0.37
RAB39A-201ENST00000320578 Q6ZN92 141 aa12.76□□□□□ -0.37
RAB39A-201ENST00000320578 TMEM141Q96I45 108 aa12.76□□□□□ -0.37
RAB39A-201ENST00000320578 TIMM17AQ99595 171 aa12.76□□□□□ -0.37
RAB39A-201ENST00000320578 X6R8D5 127 aa12.76□□□□□ -0.37
RAB39A-201ENST00000320578 LINC00612Q8N6U2 182 aa12.76□□□□□ -0.37
RAB39A-201ENST00000320578 ZNF479Q96JC4 524 aa12.76□□□□□ -0.37
RAB39A-201ENST00000320578 NACAE9PAV3 2078 aa12.75□□□□□ -0.37
RAB39A-201ENST00000320578 A0A087WX48 190 aa12.75□□□□□ -0.37
RAB39A-201ENST00000320578 IGIPA6NJ69 53 aa12.75□□□□□ -0.37
RAB39A-201ENST00000320578 MAJINQ3KP22 176 aa12.75□□□□□ -0.37
RAB39A-201ENST00000320578 UQCR10Q9UDW1 63 aa12.75□□□□□ -0.37
RAB39A-201ENST00000320578 P0DMU3 169 aa12.74□□□□□ -0.37
RAB39A-201ENST00000320578 FAM231AP0DMU4 169 aa12.74□□□□□ -0.37
RAB39A-201ENST00000320578 FAM231CP0DMU5 169 aa12.74□□□□□ -0.37
RAB39A-201ENST00000320578 PMCHL2Q9BQD1 86 aa12.74□□□□□ -0.37
RAB39A-201ENST00000320578 TP53TG1Q9Y2A0 90 aa12.74□□□□□ -0.37
RAB39A-201ENST00000320578 A8MZ25 164 aa12.74□□□□□ -0.37
RAB39A-201ENST00000320578 C20orf203Q8NBC4 194 aa12.74□□□□□ -0.37
RAB39A-201ENST00000320578 K7EQD1 137 aa12.73□□□□□ -0.37
RAB39A-201ENST00000320578 DEFA6Q01524 100 aa12.73□□□□□ -0.37
RAB39A-201ENST00000320578 DKK2Q9UBU2 259 aa12.73□□□□□ -0.37
RAB39A-201ENST00000320578 TRGV2A0A075B6R0 118 aa12.72□□□□□ -0.37
RAB39A-201ENST00000320578 hDV102S1A0JD36 115 aa12.72□□□□□ -0.37
RAB39A-201ENST00000320578 IGHV4-30-4P0DP06 118 aa12.72□□□□□ -0.37
RAB39A-201ENST00000320578 TRBV6-4A0A1B0GX49 114 aa12.72□□□□□ -0.37
RAB39A-201ENST00000320578 GAGE12BA1L429 117 aa12.72□□□□□ -0.37
RAB39A-201ENST00000320578 GAGE7O76087 117 aa12.72□□□□□ -0.37
RAB39A-201ENST00000320578 DPM2O94777 84 aa12.72□□□□□ -0.37
RAB39A-201ENST00000320578 NPSP0C0P6 89 aa12.72□□□□□ -0.37
RAB39A-201ENST00000320578 GAGE12FP0CL80 117 aa12.72□□□□□ -0.37
RAB39A-201ENST00000320578 GAGE12GP0CL81 117 aa12.72□□□□□ -0.37
RAB39A-201ENST00000320578 GAGE12IP0CL82 117 aa12.72□□□□□ -0.37
RAB39A-201ENST00000320578 BAALCQ8WXS3 180 aa12.72□□□□□ -0.37
RAB39A-201ENST00000320578 TRBV7-3A0A075B6L6 115 aa12.71□□□□□ -0.38
RAB39A-201ENST00000320578 IGKCP01834 107 aa12.71□□□□□ -0.38
RAB39A-201ENST00000320578 OXLD1Q5BKU9 147 aa12.71□□□□□ -0.38
RAB39A-201ENST00000320578 MRPL52Q86TS9 123 aaKnown RBP12.71□□□□□ -0.38
RAB39A-201ENST00000320578 LYRM9A8MSI8 78 aa12.7□□□□□ -0.38
RAB39A-201ENST00000320578 F8VRH5 84 aa12.7□□□□□ -0.38
RAB39A-201ENST00000320578 PLNP26678 52 aa12.7□□□□□ -0.38
RAB39A-201ENST00000320578 RPL36AP83881 106 aaKnown RBP12.7□□□□□ -0.38
RAB39A-201ENST00000320578 RPL36ALQ969Q0 106 aaKnown RBP12.7□□□□□ -0.38
RAB39A-201ENST00000320578 PYGO1Q9Y3Y4 419 aa12.7□□□□□ -0.38
RAB39A-201ENST00000320578 C14orf144Q96I85 54 aa12.69□□□□□ -0.38
RAB39A-201ENST00000320578 Q9UF83 564 aa12.69□□□□□ -0.38
RAB39A-201ENST00000320578 FBN1P35555 2871 aaKnown RBP12.69□□□□□ -0.38
RAB39A-201ENST00000320578 KRTAP10-11P60412 298 aa12.69□□□□□ -0.38
RAB39A-201ENST00000320578 RPL39P62891 51 aaKnown RBP12.69□□□□□ -0.38
RAB39A-201ENST00000320578 DAZ4Q86SG3 579 aaKnown RBP12.69□□□□□ -0.38
RAB39A-201ENST00000320578 SLC25A29Q8N8R3 303 aa12.69□□□□□ -0.38
RAB39A-201ENST00000320578 RNF183Q96D59 192 aa12.69□□□□□ -0.38
RAB39A-201ENST00000320578 DAZ3Q9NR90 486 aaKnown RBP12.69□□□□□ -0.38
RAB39A-201ENST00000320578 MRPL35Q9NZE8 188 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms