RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 COX7A2LO14548 114 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 BUB3O43684 328 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 NBL1P41271 181 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 UBE2D3P61077 147 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 UBE2D2P62837 147 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 C9orf47Q6ZRZ4 202 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 WFDC3Q8IUB2 231 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 A4D1N5 150 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 H3BTX0 84 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 DCTN5Q9BTE1 182 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 LINC01546A6NGU7 62 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 FUSP35637 526 aaKnown RBP eCLIP3.54□□□□□ -1.84
CNOT1-201ENST00000317147 LHBP01229 141 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 IGKV1-16P04430 117 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 PRB4P10163 310 aaPredicted RBP3.54□□□□□ -1.84
CNOT1-201ENST00000317147 CD24P25063 80 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 MIAQ16674 131 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 FAM216BQ8N7L0 139 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 IGHV4-4A0A075B6R2 117 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 TRBV7-7A0A0K0K1E9 115 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 SRRM4A7MD48 611 aaKnown RBP3.54□□□□□ -1.84
CNOT1-201ENST00000317147 MYCNOSP40205 109 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 PLA2G5P39877 138 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 TMEM200BQ69YZ2 307 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 SH2D6Q7Z4S9 175 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 ZMAT4Q9H898 229 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 FAM236DA0A1B0GTK5 79 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 FAM236CP0DP71 79 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 WFDC9Q8NEX5 89 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 NPBQ8NG41 125 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 CCL19Q99731 98 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 PPDPFQ9H3Y8 114 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 PAX4O43316 350 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 FAM120AOSQ5T036 256 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 C1orf195Q5TG92 126 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 UBE2DNLQ8IWF7 75 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 C14orf178Q8N769 122 aaPredicted RBP3.54□□□□□ -1.84
CNOT1-201ENST00000317147 NRGNQ92686 78 aa3.54□□□□□ -1.84
CNOT1-201ENST00000317147 ZNF71Q9NQZ8 489 aaPredicted RBP3.54□□□□□ -1.84
CNOT1-201ENST00000317147 IGKV2-40A0A087WW87 121 aaPredicted RBP3.53□□□□□ -1.84
CNOT1-201ENST00000317147 IGKV2D-40P01614 121 aaPredicted RBP3.53□□□□□ -1.84
CNOT1-201ENST00000317147 TFF1P04155 84 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 BAALC-AS2P0C853 105 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 TP53TG3Q9ULZ0 132 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 IGLV2-14P01704 120 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 NEXN-AS1Q8NBZ9 246 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 DEFB124Q8NES8 71 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 SERP1Q9Y6X1 66 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 TCL1BO95988 128 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 HTN1P15515 57 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 DSCR9P59020 149 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 ADARB2-AS1A8MUL3 147 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 IGHV1-46P01743 117 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 MT-ATP8P03928 68 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 DAZ2Q13117 558 aaKnown RBP3.53□□□□□ -1.84
CNOT1-201ENST00000317147 DAZ4Q86SG3 579 aaKnown RBP3.53□□□□□ -1.84
CNOT1-201ENST00000317147 SPRY4Q9C004 299 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 DAZ3Q9NR90 486 aaKnown RBP3.53□□□□□ -1.84
CNOT1-201ENST00000317147 TENM4Q6N022 2769 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 IGHV1-18A0A0C4DH31 117 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 TOMM7Q9P0U1 55 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 TINCRA0A1B0GVN0 87 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 PROP1O75360 226 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 SS18Q15532 418 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 MDS2Q8NDY4 140 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 CLUHP3Q96NS8 147 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 PYGO1Q9Y3Y4 419 aa3.53□□□□□ -1.84
CNOT1-201ENST00000317147 TRBV10-3A0A0K0K1G6 114 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 TMEM89A2RUT3 159 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 DKK1O94907 266 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 IGLV2-8P01709 118 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 IGLC6P0CF74 106 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 BSPH1Q075Z2 132 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 PRO0628Q9UI54 55 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 LINC00158P58513 81 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 RPL18AQ02543 176 aaKnown RBP3.52□□□□□ -1.85
CNOT1-201ENST00000317147 C17orf58Q2M2W7 97 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 VMO1Q7Z5L0 202 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 ZNF491Q8N8L2 437 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 ZNRF2Q8NHG8 242 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 UBE2E1P51965 193 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 SMIM26A0A096LP01 95 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 CCL21O00585 134 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 ZNF876PQ49A33 203 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 CRYGBP07316 175 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 PSMB8P28062 276 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 HIST2H2BCQ6DN03 193 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 HIST2H2BDQ6DRA6 164 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 ZNF295-AS1Q8N0V1 137 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 A0A1W2PRX2 142 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 CLPSL1A2RUU4 121 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 LST1O00453 97 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 Q6JHZ5 121 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 RNASE6Q93091 150 aaKnown RBP3.52□□□□□ -1.85
CNOT1-201ENST00000317147 Q8N976 141 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 SPTSSBQ8NFR3 76 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 FANCD2OSQ96PS1 177 aa3.52□□□□□ -1.85
CNOT1-201ENST00000317147 UBE2D1P51668 147 aa3.51□□□□□ -1.85
CNOT1-201ENST00000317147 FRMD6-AS1P0C7T7 363 aa3.51□□□□□ -1.85
CNOT1-201ENST00000317147 NFE4Q86UQ8 179 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms