RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 TRAV13-2A0A0B4J235 113 aa9.71□□□□□ -0.85
SH3PXD2A-201ENST00000315994 DEFB114Q30KQ6 69 aa9.71□□□□□ -0.85
SH3PXD2A-201ENST00000315994 TOMM6Q96B49 74 aa9.71□□□□□ -0.85
SH3PXD2A-201ENST00000315994 MLST8Q9BVC4 326 aa9.71□□□□□ -0.85
SH3PXD2A-201ENST00000315994 PRO1854Q9UHT4 67 aa9.71□□□□□ -0.85
SH3PXD2A-201ENST00000315994 HERV-K104P63124 156 aa9.71□□□□□ -0.86
SH3PXD2A-201ENST00000315994 TRAV12-1A0A0B4J245 112 aa9.71□□□□□ -0.86
SH3PXD2A-201ENST00000315994 A0A1B0GXF2 115 aa9.7□□□□□ -0.86
SH3PXD2A-201ENST00000315994 PLA2G2AP14555 144 aa9.7□□□□□ -0.86
SH3PXD2A-201ENST00000315994 PSMB8P28062 276 aa9.7□□□□□ -0.86
SH3PXD2A-201ENST00000315994 RPL18AQ02543 176 aaKnown RBP9.7□□□□□ -0.86
SH3PXD2A-201ENST00000315994 ZNF702PQ9H963 129 aa9.7□□□□□ -0.86
SH3PXD2A-201ENST00000315994 LINC00322Q6ZN03 302 aaPredicted RBP9.7□□□□□ -0.86
SH3PXD2A-201ENST00000315994 LINC00173Q6ZV60 143 aa9.7□□□□□ -0.86
SH3PXD2A-201ENST00000315994 SMIM20Q8N5G0 67 aa9.69□□□□□ -0.86
SH3PXD2A-201ENST00000315994 Q9H8V8 135 aa9.69□□□□□ -0.86
SH3PXD2A-201ENST00000315994 SCRT2Q9NQ03 307 aa9.69□□□□□ -0.86
SH3PXD2A-201ENST00000315994 PRR14LQ5THK1 2151 aa9.69□□□□□ -0.86
SH3PXD2A-201ENST00000315994 TRAV4A0A0B4J268 109 aa9.69□□□□□ -0.86
SH3PXD2A-201ENST00000315994 IGHV3-30P01768 117 aa9.69□□□□□ -0.86
SH3PXD2A-201ENST00000315994 IGHV3-33P01772 117 aa9.69□□□□□ -0.86
SH3PXD2A-201ENST00000315994 IGHV3-30-3P0DP02 117 aa9.69□□□□□ -0.86
SH3PXD2A-201ENST00000315994 IGHV3-30-5P0DP03 117 aa9.69□□□□□ -0.86
SH3PXD2A-201ENST00000315994 TIRAPP58753 221 aa9.69□□□□□ -0.86
SH3PXD2A-201ENST00000315994 TIMM17AQ99595 171 aa9.69□□□□□ -0.86
SH3PXD2A-201ENST00000315994 IGLL5B9A064 214 aa9.69□□□□□ -0.86
SH3PXD2A-201ENST00000315994 K7ERJ3 54 aa9.69□□□□□ -0.86
SH3PXD2A-201ENST00000315994 C9orf153Q5TBE3 101 aa9.69□□□□□ -0.86
SH3PXD2A-201ENST00000315994 SPG11Q96JI7 2443 aa9.69□□□□□ -0.86
SH3PXD2A-201ENST00000315994 FRMD6-AS1P0C7T7 363 aa9.69□□□□□ -0.86
SH3PXD2A-201ENST00000315994 C20orf173Q96LM9 149 aa9.69□□□□□ -0.86
SH3PXD2A-201ENST00000315994 FGF6P10767 208 aa9.68□□□□□ -0.86
SH3PXD2A-201ENST00000315994 PCP2Q8IVA1 136 aa9.68□□□□□ -0.86
SH3PXD2A-201ENST00000315994 C15orf53Q8NAA6 179 aa9.68□□□□□ -0.86
SH3PXD2A-201ENST00000315994 IGLC6P0CF74 106 aa9.68□□□□□ -0.86
SH3PXD2A-201ENST00000315994 RBMY1FQ15415 496 aaKnown RBP9.68□□□□□ -0.86
SH3PXD2A-201ENST00000315994 RNF183Q96D59 192 aa9.68□□□□□ -0.86
SH3PXD2A-201ENST00000315994 RPL39P62891 51 aaKnown RBP9.68□□□□□ -0.86
SH3PXD2A-201ENST00000315994 NOTCH3Q9UM47 2321 aa9.67□□□□□ -0.86
SH3PXD2A-201ENST00000315994 A0A0J9YXV3 536 aa9.67□□□□□ -0.86
SH3PXD2A-201ENST00000315994 HIVEP2P31629 2446 aa9.67□□□□□ -0.86
SH3PXD2A-201ENST00000315994 LY6G6DO95868 133 aa9.67□□□□□ -0.86
SH3PXD2A-201ENST00000315994 AMTNQ6UX39 209 aa9.67□□□□□ -0.86
SH3PXD2A-201ENST00000315994 C5orf38Q86SI9 138 aa9.67□□□□□ -0.86
SH3PXD2A-201ENST00000315994 BAALCQ8WXS3 180 aa9.67□□□□□ -0.86
SH3PXD2A-201ENST00000315994 TRBV10-1A0A0K0K1A3 114 aa9.67□□□□□ -0.86
SH3PXD2A-201ENST00000315994 C10orf99Q6UWK7 81 aa9.67□□□□□ -0.86
SH3PXD2A-201ENST00000315994 CAMK2N2Q96S95 79 aa9.67□□□□□ -0.86
SH3PXD2A-201ENST00000315994 ATRXP46100 2492 aa9.66□□□□□ -0.86
SH3PXD2A-201ENST00000315994 ATG2AQ2TAZ0 1938 aa9.66□□□□□ -0.86
SH3PXD2A-201ENST00000315994 C11orf45Q8TAV5 145 aa9.66□□□□□ -0.86
SH3PXD2A-201ENST00000315994 HILS1P60008 231 aa9.66□□□□□ -0.86
SH3PXD2A-201ENST00000315994 CPAMD8Q8IZJ3 1885 aa9.66□□□□□ -0.86
SH3PXD2A-201ENST00000315994 ESM1Q9NQ30 184 aa9.66□□□□□ -0.86
SH3PXD2A-201ENST00000315994 C12orf74Q32Q52 190 aa9.65□□□□□ -0.86
SH3PXD2A-201ENST00000315994 SPATA25Q9BR10 227 aa9.65□□□□□ -0.86
SH3PXD2A-201ENST00000315994 TP53TG3Q9ULZ0 132 aa9.65□□□□□ -0.86
SH3PXD2A-201ENST00000315994 COX7A2LO14548 114 aa9.65□□□□□ -0.86
SH3PXD2A-201ENST00000315994 IGLV1-40P01703 118 aa9.65□□□□□ -0.86
SH3PXD2A-201ENST00000315994 GOLGB1Q14789 3259 aaKnown RBP9.65□□□□□ -0.86
SH3PXD2A-201ENST00000315994 PRO0255Q9UI72 69 aa9.65□□□□□ -0.86
SH3PXD2A-201ENST00000315994 DEFB4AO15263 64 aa9.65□□□□□ -0.87
SH3PXD2A-201ENST00000315994 HIST1H4AP62805 103 aaKnown RBP9.65□□□□□ -0.87
SH3PXD2A-201ENST00000315994 INAFM2P0DMQ5 153 aa9.64□□□□□ -0.87
SH3PXD2A-201ENST00000315994 MBD6Q96DN6 1003 aa9.64□□□□□ -0.87
SH3PXD2A-201ENST00000315994 GAGE2AQ6NT46 116 aa9.64□□□□□ -0.87
SH3PXD2A-201ENST00000315994 C20orf203Q8NBC4 194 aa9.64□□□□□ -0.87
SH3PXD2A-201ENST00000315994 CACNA1AO00555 2505 aa9.64□□□□□ -0.87
SH3PXD2A-201ENST00000315994 PIEZO1Q92508 2521 aa9.64□□□□□ -0.87
SH3PXD2A-201ENST00000315994 SMIM9A6NGZ8 99 aa9.63□□□□□ -0.87
SH3PXD2A-201ENST00000315994 NCOR2Q9Y618 2525 aa9.63□□□□□ -0.87
SH3PXD2A-201ENST00000315994 C14orf177Q52M58 125 aa9.63□□□□□ -0.87
SH3PXD2A-201ENST00000315994 COX7B2Q8TF08 81 aa9.63□□□□□ -0.87
SH3PXD2A-201ENST00000315994 KIAA1549Q9HCM3 1950 aa9.63□□□□□ -0.87
SH3PXD2A-201ENST00000315994 IGLV10-54A0A075B6I4 117 aa9.63□□□□□ -0.87
SH3PXD2A-201ENST00000315994 ETDCA0A1B0GVM5 59 aa9.63□□□□□ -0.87
SH3PXD2A-201ENST00000315994 SOCS3O14543 225 aa9.62□□□□□ -0.87
SH3PXD2A-201ENST00000315994 LINC01006Q8NI28 216 aa9.62□□□□□ -0.87
SH3PXD2A-201ENST00000315994 EXPH5Q8NEV8 1989 aa9.62□□□□□ -0.87
SH3PXD2A-201ENST00000315994 IGF2RP11717 2491 aa9.62□□□□□ -0.87
SH3PXD2A-201ENST00000315994 EML5Q05BV3 1969 aa9.62□□□□□ -0.87
SH3PXD2A-201ENST00000315994 C11orf86A6NJI1 115 aa9.62□□□□□ -0.87
SH3PXD2A-201ENST00000315994 WFDC2Q14508 124 aa9.62□□□□□ -0.87
SH3PXD2A-201ENST00000315994 C4orf48Q5BLP8 95 aa9.62□□□□□ -0.87
SH3PXD2A-201ENST00000315994 CFC1BP0CG36 223 aa9.62□□□□□ -0.87
SH3PXD2A-201ENST00000315994 CFC1P0CG37 223 aa9.62□□□□□ -0.87
SH3PXD2A-201ENST00000315994 ZFAND2AQ8N6M9 145 aa9.62□□□□□ -0.87
SH3PXD2A-201ENST00000315994 GDF5OSQ5U4N7 250 aa9.61□□□□□ -0.87
SH3PXD2A-201ENST00000315994 VSIG2Q96IQ7 327 aa9.61□□□□□ -0.87
SH3PXD2A-201ENST00000315994 AVPP01185 164 aa9.61□□□□□ -0.87
SH3PXD2A-201ENST00000315994 E9PLD3 99 aa9.61□□□□□ -0.87
SH3PXD2A-201ENST00000315994 CRIP1P50238 77 aa9.61□□□□□ -0.87
SH3PXD2A-201ENST00000315994 ODF1Q14990 250 aa9.61□□□□□ -0.87
SH3PXD2A-201ENST00000315994 Q6ZTI0 123 aa9.61□□□□□ -0.87
SH3PXD2A-201ENST00000315994 A0A1W2PPR1 153 aa9.6□□□□□ -0.87
SH3PXD2A-201ENST00000315994 IGLV2-11P01706 119 aa9.6□□□□□ -0.87
SH3PXD2A-201ENST00000315994 Q6ZS46 218 aa9.6□□□□□ -0.87
SH3PXD2A-201ENST00000315994 LYRM9A8MSI8 78 aa9.6□□□□□ -0.87
SH3PXD2A-201ENST00000315994 SPANXDQ9BXN6 97 aa9.6□□□□□ -0.87
SH3PXD2A-201ENST00000315994 UBE2AP49459 152 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms