RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 GAGE4Q13068 117 aa10.96□□□□□ -0.66
COL6A2-202ENST00000310645 LY6EQ16553 131 aa10.96□□□□□ -0.66
COL6A2-202ENST00000310645 SOCS3O14543 225 aa10.96□□□□□ -0.66
COL6A2-202ENST00000310645 PF4V1P10720 104 aa10.96□□□□□ -0.66
COL6A2-202ENST00000310645 RNASE13Q5GAN3 156 aaKnown RBP10.96□□□□□ -0.66
COL6A2-202ENST00000310645 TMEM223A0PJW6 202 aa10.95□□□□□ -0.66
COL6A2-202ENST00000310645 Q6ZSV7 163 aa10.95□□□□□ -0.66
COL6A2-202ENST00000310645 TRIAP1O43715 76 aa10.95□□□□□ -0.66
COL6A2-202ENST00000310645 MED14OSP0DP75 135 aa10.95□□□□□ -0.66
COL6A2-202ENST00000310645 ZNF22P17026 224 aaPredicted RBP10.95□□□□□ -0.66
COL6A2-202ENST00000310645 C2orf82Q6UX34 121 aa10.95□□□□□ -0.66
COL6A2-202ENST00000310645 BRD3OSQ6XYD6 125 aa10.95□□□□□ -0.66
COL6A2-202ENST00000310645 MDFICQ9P1T7 246 aa10.95□□□□□ -0.66
COL6A2-202ENST00000310645 NPFFO15130 113 aa10.94□□□□□ -0.66
COL6A2-202ENST00000310645 TRAV8-3A0A0A6YYJ7 113 aa10.94□□□□□ -0.66
COL6A2-202ENST00000310645 CSPG4Q6UVK1 2322 aa10.94□□□□□ -0.66
COL6A2-202ENST00000310645 HTN1P15515 57 aa10.93□□□□□ -0.66
COL6A2-202ENST00000310645 KLK9Q9UKQ9 250 aa10.93□□□□□ -0.66
COL6A2-202ENST00000310645 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.93□□□□□ -0.66
COL6A2-202ENST00000310645 TRBV27A0A0K0K1C4 114 aa10.93□□□□□ -0.66
COL6A2-202ENST00000310645 H3BMM0 161 aa10.93□□□□□ -0.66
COL6A2-202ENST00000310645 NDUFA4O00483 81 aa10.93□□□□□ -0.66
COL6A2-202ENST00000310645 SMIM20Q8N5G0 67 aa10.93□□□□□ -0.66
COL6A2-202ENST00000310645 C3orf56Q8N813 242 aa10.93□□□□□ -0.66
COL6A2-202ENST00000310645 UBE2WQ96B02 151 aa10.93□□□□□ -0.66
COL6A2-202ENST00000310645 A0A0B4J2C4 111 aa10.93□□□□□ -0.66
COL6A2-202ENST00000310645 A0A0J9YXY3 114 aa10.93□□□□□ -0.66
COL6A2-202ENST00000310645 CEMP1Q6PRD7 247 aaPredicted RBP10.93□□□□□ -0.66
COL6A2-202ENST00000310645 ODF3Q96PU9 254 aa10.93□□□□□ -0.66
COL6A2-202ENST00000310645 IGHV3-73A0A0B4J1V6 119 aa10.92□□□□□ -0.66
COL6A2-202ENST00000310645 P0DMU3 169 aa10.92□□□□□ -0.66
COL6A2-202ENST00000310645 FAM231AP0DMU4 169 aa10.92□□□□□ -0.66
COL6A2-202ENST00000310645 FAM231CP0DMU5 169 aa10.92□□□□□ -0.66
COL6A2-202ENST00000310645 CLEC2BQ92478 149 aa10.92□□□□□ -0.66
COL6A2-202ENST00000310645 FAM223BA6NKX1 122 aa10.92□□□□□ -0.66
COL6A2-202ENST00000310645 A8MZ25 164 aa10.92□□□□□ -0.66
COL6A2-202ENST00000310645 C11orf71Q6IPW1 123 aa10.92□□□□□ -0.66
COL6A2-202ENST00000310645 FAM223AQ8IWN6 122 aa10.92□□□□□ -0.66
COL6A2-202ENST00000310645 FAM19A4Q96LR4 140 aa10.92□□□□□ -0.66
COL6A2-202ENST00000310645 DUX3Q96PT4 197 aa10.92□□□□□ -0.66
COL6A2-202ENST00000310645 NACAE9PAV3 2078 aa10.92□□□□□ -0.66
COL6A2-202ENST00000310645 TRBV10-2A0A0K0K1G8 114 aa10.91□□□□□ -0.66
COL6A2-202ENST00000310645 M0R2P5 195 aa10.91□□□□□ -0.66
COL6A2-202ENST00000310645 NXPH4O95158 308 aa10.91□□□□□ -0.66
COL6A2-202ENST00000310645 IGHV3-30-3P0DP02 117 aa10.91□□□□□ -0.66
COL6A2-202ENST00000310645 RPL32P62910 135 aaKnown RBP10.91□□□□□ -0.66
COL6A2-202ENST00000310645 POM121L12Q8N7R1 296 aa10.91□□□□□ -0.66
COL6A2-202ENST00000310645 BPESC1Q9GZL8 116 aa10.91□□□□□ -0.66
COL6A2-202ENST00000310645 MOB4Q9Y3A3 225 aa10.91□□□□□ -0.66
COL6A2-202ENST00000310645 M0QY20 66 aa10.9□□□□□ -0.66
COL6A2-202ENST00000310645 TIMM21Q9BVV7 248 aa10.9□□□□□ -0.66
COL6A2-202ENST00000310645 C20orf203Q8NBC4 194 aa10.9□□□□□ -0.67
COL6A2-202ENST00000310645 A0A1W2PPR1 153 aa10.89□□□□□ -0.67
COL6A2-202ENST00000310645 CD28P10747 220 aa10.89□□□□□ -0.67
COL6A2-202ENST00000310645 KLK9Q2XQG4 91 aa10.89□□□□□ -0.67
COL6A2-202ENST00000310645 ADAMTSL4-AS1Q5T5F5 129 aa10.89□□□□□ -0.67
COL6A2-202ENST00000310645 IGLV4-3A0A075B6K6 122 aa10.89□□□□□ -0.67
COL6A2-202ENST00000310645 KLLNB2CW77 178 aa10.89□□□□□ -0.67
COL6A2-202ENST00000310645 LGALS9O00182 355 aa10.89□□□□□ -0.67
COL6A2-202ENST00000310645 DAND5Q8N907 189 aa10.89□□□□□ -0.67
COL6A2-202ENST00000310645 H7C423 109 aa10.88□□□□□ -0.67
COL6A2-202ENST00000310645 ICOSQ9Y6W8 199 aa10.88□□□□□ -0.67
COL6A2-202ENST00000310645 NOTCH3Q9UM47 2321 aa10.88□□□□□ -0.67
COL6A2-202ENST00000310645 HERV-K104P63124 156 aa10.88□□□□□ -0.67
COL6A2-202ENST00000310645 FOXC1Q12948 553 aa10.88□□□□□ -0.67
COL6A2-202ENST00000310645 IGHV1-69P01742 117 aa10.87□□□□□ -0.67
COL6A2-202ENST00000310645 COX6CP09669 75 aa10.87□□□□□ -0.67
COL6A2-202ENST00000310645 SPINK13Q1W4C9 94 aa10.87□□□□□ -0.67
COL6A2-202ENST00000310645 APRG1Q8IVJ8 170 aa10.87□□□□□ -0.67
COL6A2-202ENST00000310645 NDUFA12Q9UI09 145 aa10.87□□□□□ -0.67
COL6A2-202ENST00000310645 IGHV3-16A0A0C4DH30 117 aa10.87□□□□□ -0.67
COL6A2-202ENST00000310645 TRBV7-9A0A0J9YWB2 115 aa10.87□□□□□ -0.67
COL6A2-202ENST00000310645 TRBV6-5A0A0K0K1A5 114 aa10.87□□□□□ -0.67
COL6A2-202ENST00000310645 TRBV30A0A0K0K1B3 111 aa10.87□□□□□ -0.67
COL6A2-202ENST00000310645 BLCAPP62952 87 aa10.87□□□□□ -0.67
COL6A2-202ENST00000310645 HIVEP3Q5T1R4 2406 aa10.86□□□□□ -0.67
COL6A2-202ENST00000310645 I3L3M4 83 aa10.86□□□□□ -0.67
COL6A2-202ENST00000310645 ID1P41134 155 aa10.86□□□□□ -0.67
COL6A2-202ENST00000310645 RHOHQ15669 191 aa10.86□□□□□ -0.67
COL6A2-202ENST00000310645 DAZ1Q9NQZ3 744 aaKnown RBP10.86□□□□□ -0.67
COL6A2-202ENST00000310645 ADORA2A-AS1P86434 159 aa10.86□□□□□ -0.67
COL6A2-202ENST00000310645 NSUN5P1Q3KNT7 163 aa10.86□□□□□ -0.67
COL6A2-202ENST00000310645 MEIG1Q5JSS6 88 aa10.86□□□□□ -0.67
COL6A2-202ENST00000310645 CHCHD5Q9BSY4 110 aa10.86□□□□□ -0.67
COL6A2-202ENST00000310645 A0A0U1RRA0 63 aa10.86□□□□□ -0.67
COL6A2-202ENST00000310645 M0QXV9 152 aa10.85□□□□□ -0.67
COL6A2-202ENST00000310645 RPL13AP40429 203 aaKnown RBP10.85□□□□□ -0.67
COL6A2-202ENST00000310645 PROK1P58294 105 aa10.85□□□□□ -0.67
COL6A2-202ENST00000310645 LMO4P61968 165 aa10.85□□□□□ -0.67
COL6A2-202ENST00000310645 FBXL19-AS1Q494R0 122 aa10.85□□□□□ -0.67
COL6A2-202ENST00000310645 C2CD3Q4AC94 2353 aa10.85□□□□□ -0.67
COL6A2-202ENST00000310645 KNCNA6PVL3 124 aa10.84□□□□□ -0.67
COL6A2-202ENST00000310645 SHISA2Q6UWI4 295 aa10.84□□□□□ -0.67
COL6A2-202ENST00000310645 LITAFQ99732 161 aa10.83□□□□□ -0.68
COL6A2-202ENST00000310645 H3BUX3 64 aa10.83□□□□□ -0.68
COL6A2-202ENST00000310645 C19orf54Q5BKX5 351 aa10.83□□□□□ -0.68
COL6A2-202ENST00000310645 C9orf85Q96MD7 179 aa10.83□□□□□ -0.68
COL6A2-202ENST00000310645 PRM2P04554 102 aa10.82□□□□□ -0.68
COL6A2-202ENST00000310645 IGHV1OR15-1A0A075B7D0 117 aa10.82□□□□□ -0.68
COL6A2-202ENST00000310645 TMEM95Q3KNT9 176 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms