RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 OOSP1A8MZH6 123 aa8.13□□□□□ -1.11
ZNF558-201ENST00000301475 LEPROTO15243 131 aa8.13□□□□□ -1.11
ZNF558-201ENST00000301475 UNQ9165/PRO28630Q6UXU0 137 aa8.13□□□□□ -1.11
ZNF558-201ENST00000301475 LINC01600Q96MT4 127 aa8.13□□□□□ -1.11
ZNF558-201ENST00000301475 TRBV10-2A0A0K0K1G8 114 aa8.13□□□□□ -1.11
ZNF558-201ENST00000301475 GRNP28799 593 aaKnown RBP8.13□□□□□ -1.11
ZNF558-201ENST00000301475 H3BMM0 161 aa8.12□□□□□ -1.11
ZNF558-201ENST00000301475 LGALS9O00182 355 aa8.12□□□□□ -1.11
ZNF558-201ENST00000301475 VCYO14598 125 aa8.12□□□□□ -1.11
ZNF558-201ENST00000301475 ZNF22P17026 224 aaPredicted RBP8.12□□□□□ -1.11
ZNF558-201ENST00000301475 MINOS1Q5TGZ0 78 aa8.12□□□□□ -1.11
ZNF558-201ENST00000301475 UBE2WQ96B02 151 aa8.12□□□□□ -1.11
ZNF558-201ENST00000301475 MINOS1-NBL1R4GNA1 71 aa8.12□□□□□ -1.11
ZNF558-201ENST00000301475 PRRC2AP48634 2157 aaKnown RBP8.12□□□□□ -1.11
ZNF558-201ENST00000301475 UTP20O75691 2785 aaKnown RBP8.12□□□□□ -1.11
ZNF558-201ENST00000301475 TRBV7-1A0A0A6YYK4 115 aa8.12□□□□□ -1.11
ZNF558-201ENST00000301475 ZNF256Q9Y2P7 627 aaPredicted RBP8.12□□□□□ -1.11
ZNF558-201ENST00000301475 LRRK2Q5S007 2527 aa8.12□□□□□ -1.11
ZNF558-201ENST00000301475 TRBV27A0A0K0K1C4 114 aa8.11□□□□□ -1.11
ZNF558-201ENST00000301475 TRBV12-3P01733 135 aa8.11□□□□□ -1.11
ZNF558-201ENST00000301475 ZFP36P26651 326 aaKnown RBP8.11□□□□□ -1.11
ZNF558-201ENST00000301475 APRG1Q8IVJ8 170 aa8.11□□□□□ -1.11
ZNF558-201ENST00000301475 ADARB2-AS1A8MUL3 147 aa8.11□□□□□ -1.11
ZNF558-201ENST00000301475 F5H697 171 aa8.11□□□□□ -1.11
ZNF558-201ENST00000301475 M0R2P5 195 aa8.11□□□□□ -1.11
ZNF558-201ENST00000301475 OVOL1O14753 267 aa8.11□□□□□ -1.11
ZNF558-201ENST00000301475 VPS13CQ709C8 3753 aa8.11□□□□□ -1.11
ZNF558-201ENST00000301475 IGKV3-7A0A075B6H7 116 aa8.11□□□□□ -1.11
ZNF558-201ENST00000301475 A0A0J9YXY3 114 aa8.11□□□□□ -1.11
ZNF558-201ENST00000301475 TRBV30A0A0K0K1B3 111 aa8.11□□□□□ -1.11
ZNF558-201ENST00000301475 LINC00527Q9UJ94 153 aa8.11□□□□□ -1.11
ZNF558-201ENST00000301475 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.1□□□□□ -1.11
ZNF558-201ENST00000301475 H7C423 109 aa8.1□□□□□ -1.11
ZNF558-201ENST00000301475 UCNP55089 124 aa8.1□□□□□ -1.11
ZNF558-201ENST00000301475 LITAFQ99732 161 aa8.1□□□□□ -1.11
ZNF558-201ENST00000301475 USP24Q9UPU5 2620 aa8.1□□□□□ -1.11
ZNF558-201ENST00000301475 USP9XQ93008 2570 aaPredicted RBP8.1□□□□□ -1.11
ZNF558-201ENST00000301475 CSMD2Q7Z408 3487 aa8.1□□□□□ -1.11
ZNF558-201ENST00000301475 A0A0J9YXV3 536 aa8.1□□□□□ -1.11
ZNF558-201ENST00000301475 CCL21O00585 134 aa8.1□□□□□ -1.11
ZNF558-201ENST00000301475 FAM74A4Q5TZK3 123 aa8.1□□□□□ -1.11
ZNF558-201ENST00000301475 C2orf82Q6UX34 121 aa8.1□□□□□ -1.11
ZNF558-201ENST00000301475 Q6ZSV7 163 aa8.1□□□□□ -1.11
ZNF558-201ENST00000301475 MDFICQ9P1T7 246 aa8.09□□□□□ -1.11
ZNF558-201ENST00000301475 IGHV1-69P01742 117 aa8.09□□□□□ -1.11
ZNF558-201ENST00000301475 UBE2E1P51965 193 aa8.09□□□□□ -1.11
ZNF558-201ENST00000301475 CDSNQ15517 529 aa8.09□□□□□ -1.11
ZNF558-201ENST00000301475 SIRPDQ9H106 197 aa8.09□□□□□ -1.11
ZNF558-201ENST00000301475 ZNF462Q96JM2 2506 aa8.09□□□□□ -1.11
ZNF558-201ENST00000301475 BRI3O95415 125 aa8.08□□□□□ -1.12
ZNF558-201ENST00000301475 MEIG1Q5JSS6 88 aa8.08□□□□□ -1.12
ZNF558-201ENST00000301475 C3orf56Q8N813 242 aa8.08□□□□□ -1.12
ZNF558-201ENST00000301475 A0A0J9YX75 114 aa8.08□□□□□ -1.12
ZNF558-201ENST00000301475 TRBV6-5A0A0K0K1A5 114 aa8.08□□□□□ -1.12
ZNF558-201ENST00000301475 CLEC2BQ92478 149 aa8.08□□□□□ -1.12
ZNF558-201ENST00000301475 ICOSQ9Y6W8 199 aa8.08□□□□□ -1.12
ZNF558-201ENST00000301475 SAA4P35542 130 aa8.08□□□□□ -1.12
ZNF558-201ENST00000301475 RPL11P62913 178 aaKnown RBP8.08□□□□□ -1.12
ZNF558-201ENST00000301475 KLRB1Q12918 225 aa8.08□□□□□ -1.12
ZNF558-201ENST00000301475 NSUN5P1Q3KNT7 163 aa8.08□□□□□ -1.12
ZNF558-201ENST00000301475 KLLNB2CW77 178 aa8.07□□□□□ -1.12
ZNF558-201ENST00000301475 ADAMTSL4-AS1Q5T5F5 129 aa8.07□□□□□ -1.12
ZNF558-201ENST00000301475 DUX3Q96PT4 197 aa8.07□□□□□ -1.12
ZNF558-201ENST00000301475 CHCHD5Q9BSY4 110 aa8.07□□□□□ -1.12
ZNF558-201ENST00000301475 IGLV4-3A0A075B6K6 122 aa8.07□□□□□ -1.12
ZNF558-201ENST00000301475 IGHV3-30-3P0DP02 117 aa8.07□□□□□ -1.12
ZNF558-201ENST00000301475 ZNF56Q15929 161 aa8.07□□□□□ -1.12
ZNF558-201ENST00000301475 TMEM219Q86XT9 240 aa8.07□□□□□ -1.12
ZNF558-201ENST00000301475 TRAV8-3A0A0A6YYJ7 113 aa8.06□□□□□ -1.12
ZNF558-201ENST00000301475 M0QY20 66 aa8.06□□□□□ -1.12
ZNF558-201ENST00000301475 C5orf56Q8N8D9 126 aa8.06□□□□□ -1.12
ZNF558-201ENST00000301475 H3BT86 120 aa8.06□□□□□ -1.12
ZNF558-201ENST00000301475 NPC2P61916 151 aa8.06□□□□□ -1.12
ZNF558-201ENST00000301475 C20orf203Q8NBC4 194 aa8.06□□□□□ -1.12
ZNF558-201ENST00000301475 PRSS2P07478 247 aa8.05□□□□□ -1.12
ZNF558-201ENST00000301475 RHOHQ15669 191 aa8.05□□□□□ -1.12
ZNF558-201ENST00000301475 SPXQ9BT56 116 aa8.05□□□□□ -1.12
ZNF558-201ENST00000301475 POLQO75417 2590 aa8.05□□□□□ -1.12
ZNF558-201ENST00000301475 TRAV12-3A0A0B4J271 114 aa8.05□□□□□ -1.12
ZNF558-201ENST00000301475 C19orf54Q5BKX5 351 aa8.05□□□□□ -1.12
ZNF558-201ENST00000301475 TRAV41A0A0B4J266 112 aa8.05□□□□□ -1.12
ZNF558-201ENST00000301475 FAM240AA0A1B0GVK7 77 aa8.05□□□□□ -1.12
ZNF558-201ENST00000301475 LINC01587Q99440 93 aa8.05□□□□□ -1.12
ZNF558-201ENST00000301475 NDUFA4O00483 81 aa8.04□□□□□ -1.12
ZNF558-201ENST00000301475 EDN2P20800 178 aa8.04□□□□□ -1.12
ZNF558-201ENST00000301475 MRPL23Q16540 153 aaKnown RBP8.04□□□□□ -1.12
ZNF558-201ENST00000301475 FAM104AQ969W3 186 aa8.04□□□□□ -1.12
ZNF558-201ENST00000301475 SORL1Q92673 2214 aa8.04□□□□□ -1.12
ZNF558-201ENST00000301475 CELSR2Q9HCU4 2923 aa8.04□□□□□ -1.12
ZNF558-201ENST00000301475 TRBV7-7A0A0K0K1E9 115 aa8.04□□□□□ -1.12
ZNF558-201ENST00000301475 FAM223BA6NKX1 122 aa8.04□□□□□ -1.12
ZNF558-201ENST00000301475 A8MZ25 164 aa8.04□□□□□ -1.12
ZNF558-201ENST00000301475 LST1O00453 97 aa8.04□□□□□ -1.12
ZNF558-201ENST00000301475 C11orf71Q6IPW1 123 aa8.04□□□□□ -1.12
ZNF558-201ENST00000301475 FAM223AQ8IWN6 122 aa8.04□□□□□ -1.12
ZNF558-201ENST00000301475 TIMM21Q9BVV7 248 aa8.04□□□□□ -1.12
ZNF558-201ENST00000301475 IGHV3-11P01762 117 aa8.03□□□□□ -1.12
ZNF558-201ENST00000301475 TRGV11A0A075B6L2 103 aa8.03□□□□□ -1.12
ZNF558-201ENST00000301475 I3L3M4 83 aa8.03□□□□□ -1.12
ZNF558-201ENST00000301475 DEFB121Q5J5C9 76 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms