RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 GAGE1Q13065 139 aa4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 GAGE4Q13068 117 aa4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 GAGE5Q13069 117 aa4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 GAGE13Q4V321 117 aa4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 SUMO4Q6EEV6 95 aa4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 RPL39LQ96EH5 51 aaKnown RBP4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 RNF185Q96GF1 192 aa4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 VSIG2Q96IQ7 327 aa4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 YPEL4Q96NS1 127 aa4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 GFRA4Q9GZZ7 299 aa4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 NAT8BQ9UHF3 227 aa4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 HYDINQ4G0P3 5121 aa4.53□□□□□ -1.68
DEPDC4-201ENST00000299185 TRBV24-1A0A075B6N3 115 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 IGHV4-4A0A075B6R2 117 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 TRAV9-1A0A075B6T8 112 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 IGHV3-38A0A0C4DH36 116 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 COLCA2A8K830 154 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 IGLL5B9A064 214 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 F5H697 171 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 GYPEP15421 78 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 S100PP25815 95 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 RAB4BP61018 213 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 HBBP68871 147 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 RIGQ13278 110 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 ELOBQ15370 118 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 LGALS9BQ3B8N2 356 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 KIAA1644Q3SXP7 199 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 KCNIP4Q6PIL6 250 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 MUC7Q8TAX7 377 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 BORCS7Q96B45 105 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 BTF3L4Q96K17 158 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 CNFNQ9BYD5 112 aa4.52□□□□□ -1.69
DEPDC4-201ENST00000299185 TEX48A0A1B0GUV7 120 aa4.51□□□□□ -1.69
DEPDC4-201ENST00000299185 A8MWV9 139 aa4.51□□□□□ -1.69
DEPDC4-201ENST00000299185 K7EQD1 137 aa4.51□□□□□ -1.69
DEPDC4-201ENST00000299185 NUDT3O95989 172 aa4.51□□□□□ -1.69
DEPDC4-201ENST00000299185 TRGC1P0CF51 173 aa4.51□□□□□ -1.69
DEPDC4-201ENST00000299185 CRYBA4P53673 196 aa4.51□□□□□ -1.69
DEPDC4-201ENST00000299185 SLAQ13239 276 aa4.51□□□□□ -1.69
DEPDC4-201ENST00000299185 MRPL51Q4U2R6 128 aaKnown RBP4.51□□□□□ -1.69
DEPDC4-201ENST00000299185 TMEM136Q6ZRR5 245 aa4.51□□□□□ -1.69
DEPDC4-201ENST00000299185 SLC25A29Q8N8R3 303 aa4.51□□□□□ -1.69
DEPDC4-201ENST00000299185 NEXN-AS1Q8NBZ9 246 aa4.51□□□□□ -1.69
DEPDC4-201ENST00000299185 PTH2Q96A98 100 aa4.51□□□□□ -1.69
DEPDC4-201ENST00000299185 DPH3P1Q9H4G8 78 aa4.51□□□□□ -1.69
DEPDC4-201ENST00000299185 STARD9Q9P2P6 4700 aa4.5□□□□□ -1.69
DEPDC4-201ENST00000299185 STAB2Q8WWQ8 2551 aa4.5□□□□□ -1.69
DEPDC4-201ENST00000299185 F2Z2F3 143 aa4.5□□□□□ -1.69
DEPDC4-201ENST00000299185 RHODO00212 210 aa4.5□□□□□ -1.69
DEPDC4-201ENST00000299185 NPYP01303 97 aa4.5□□□□□ -1.69
DEPDC4-201ENST00000299185 SMIM17P0DL12 118 aa4.5□□□□□ -1.69
DEPDC4-201ENST00000299185 LINC00694P0DN24 101 aa4.5□□□□□ -1.69
DEPDC4-201ENST00000299185 CEMP1Q6PRD7 247 aaPredicted RBP4.5□□□□□ -1.69
DEPDC4-201ENST00000299185 GATD1Q8NB37 220 aa4.5□□□□□ -1.69
DEPDC4-201ENST00000299185 C18orf15Q96N68 181 aa4.5□□□□□ -1.69
DEPDC4-201ENST00000299185 ALMS1Q8TCU4 4167 aa4.5□□□□□ -1.69
DEPDC4-201ENST00000299185 D6R8Y8 96 aa4.49□□□□□ -1.69
DEPDC4-201ENST00000299185 M0QY20 66 aa4.49□□□□□ -1.69
DEPDC4-201ENST00000299185 RAB4AP20338 218 aa4.49□□□□□ -1.69
DEPDC4-201ENST00000299185 RAB5AP20339 215 aa4.49□□□□□ -1.69
DEPDC4-201ENST00000299185 IQCJQ1A5X6 159 aa4.49□□□□□ -1.69
DEPDC4-201ENST00000299185 FAM104BQ5XKR9 115 aa4.49□□□□□ -1.69
DEPDC4-201ENST00000299185 NRACQ8N912 160 aa4.49□□□□□ -1.69
DEPDC4-201ENST00000299185 FAM210BQ96KR6 192 aa4.49□□□□□ -1.69
DEPDC4-201ENST00000299185 NDUFAF3Q9BU61 184 aa4.49□□□□□ -1.69
DEPDC4-201ENST00000299185 TMEM191AQ9H0A3 160 aa4.49□□□□□ -1.69
DEPDC4-201ENST00000299185 APLNQ9ULZ1 77 aa4.49□□□□□ -1.69
DEPDC4-201ENST00000299185 HHLA3Q9XRX5 114 aa4.49□□□□□ -1.69
DEPDC4-201ENST00000299185 NUPR2A6NF83 97 aa4.48□□□□□ -1.69
DEPDC4-201ENST00000299185 RHOHQ15669 191 aa4.48□□□□□ -1.69
DEPDC4-201ENST00000299185 COX19Q49B96 90 aa4.48□□□□□ -1.69
DEPDC4-201ENST00000299185 OR10J3Q5JRS4 329 aa4.48□□□□□ -1.69
DEPDC4-201ENST00000299185 CASC10Q5T4H9 136 aa4.48□□□□□ -1.69
DEPDC4-201ENST00000299185 WDR73Q6P4I2 378 aa4.48□□□□□ -1.69
DEPDC4-201ENST00000299185 RASL11AQ6T310 242 aa4.48□□□□□ -1.69
DEPDC4-201ENST00000299185 ZFP2Q6ZN57 461 aa4.48□□□□□ -1.69
DEPDC4-201ENST00000299185 ATP5L2Q7Z4Y8 100 aa4.48□□□□□ -1.69
DEPDC4-201ENST00000299185 ZNRF2Q8NHG8 242 aa4.48□□□□□ -1.69
DEPDC4-201ENST00000299185 PRO0255Q9UI72 69 aa4.48□□□□□ -1.69
DEPDC4-201ENST00000299185 DYNC2H1Q8NCM8 4307 aaKnown RBP4.48□□□□□ -1.69
DEPDC4-201ENST00000299185 A0A1B0GW15 77 aa4.47□□□□□ -1.69
DEPDC4-201ENST00000299185 SRIP30626 198 aa4.47□□□□□ -1.69
DEPDC4-201ENST00000299185 PIK3CD-AS1Q5SR53 167 aa4.47□□□□□ -1.69
DEPDC4-201ENST00000299185 SMIM15Q7Z3B0 74 aa4.47□□□□□ -1.69
DEPDC4-201ENST00000299185 FRZBQ92765 325 aa4.47□□□□□ -1.69
DEPDC4-201ENST00000299185 GNB1LQ9BYB4 327 aa4.47□□□□□ -1.69
DEPDC4-201ENST00000299185 ICOSQ9Y6W8 199 aa4.47□□□□□ -1.69
DEPDC4-201ENST00000299185 DNAH7Q8WXX0 4024 aa4.47□□□□□ -1.69
DEPDC4-201ENST00000299185 COL7A1Q02388 2944 aa4.46□□□□□ -1.69
DEPDC4-201ENST00000299185 LOC389332A0A1B0GUA5 103 aa4.46□□□□□ -1.7
DEPDC4-201ENST00000299185 TRBV6-4A0A1B0GX49 114 aa4.46□□□□□ -1.7
DEPDC4-201ENST00000299185 HLA-DQA1P01909 254 aa4.46□□□□□ -1.7
DEPDC4-201ENST00000299185 APCSP02743 223 aa4.46□□□□□ -1.7
DEPDC4-201ENST00000299185 CKS2P33552 79 aa4.46□□□□□ -1.7
DEPDC4-201ENST00000299185 UBE2D3P61077 147 aa4.46□□□□□ -1.7
DEPDC4-201ENST00000299185 UBE2D2P62837 147 aa4.46□□□□□ -1.7
DEPDC4-201ENST00000299185 FABP9Q0Z7S8 132 aa4.46□□□□□ -1.7
DEPDC4-201ENST00000299185 ESRGQ1W209 222 aa4.46□□□□□ -1.7
DEPDC4-201ENST00000299185 WFDC10BQ8IUB3 73 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms