RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 H3BMM0 161 aa7.51□□□□□ -1.21
RFC4-201ENST00000296273 C3orf79P0CE67 100 aa7.51□□□□□ -1.21
RFC4-201ENST00000296273 S100A4P26447 101 aaKnown RBP7.51□□□□□ -1.21
RFC4-201ENST00000296273 PET117Q6UWS5 81 aa7.51□□□□□ -1.21
RFC4-201ENST00000296273 FAM159AQ6UWV7 190 aa7.51□□□□□ -1.21
RFC4-201ENST00000296273 SPATA12Q7Z6I5 190 aa7.51□□□□□ -1.21
RFC4-201ENST00000296273 AMN1Q8IY45 258 aa7.51□□□□□ -1.21
RFC4-201ENST00000296273 ZNF664Q8N3J9 261 aa7.51□□□□□ -1.21
RFC4-201ENST00000296273 CLUHP3Q96NS8 147 aa7.51□□□□□ -1.21
RFC4-201ENST00000296273 VAMP8Q9BV40 100 aa7.51□□□□□ -1.21
RFC4-201ENST00000296273 MAP1LC3CQ9BXW4 147 aa7.51□□□□□ -1.21
RFC4-201ENST00000296273 KRTAP4-5Q9BYR2 181 aa7.51□□□□□ -1.21
RFC4-201ENST00000296273 MAP1LC3AQ9H492 121 aa7.51□□□□□ -1.21
RFC4-201ENST00000296273 SCRT2Q9NQ03 307 aa7.51□□□□□ -1.21
RFC4-201ENST00000296273 IGHV1-24A0A0C4DH33 117 aa7.5□□□□□ -1.21
RFC4-201ENST00000296273 CDK2AP2O75956 126 aa7.5□□□□□ -1.21
RFC4-201ENST00000296273 HLA-DRB4P13762 266 aa7.5□□□□□ -1.21
RFC4-201ENST00000296273 RNASE4P34096 147 aaKnown RBP7.5□□□□□ -1.21
RFC4-201ENST00000296273 FAM19A2Q8N3H0 131 aa7.5□□□□□ -1.21
RFC4-201ENST00000296273 URB1-AS1Q96HZ7 61 aa7.5□□□□□ -1.21
RFC4-201ENST00000296273 C11orf21Q9P2W6 132 aa7.5□□□□□ -1.21
RFC4-201ENST00000296273 PHLDA3Q9Y5J5 127 aa7.5□□□□□ -1.21
RFC4-201ENST00000296273 HLA-DRB4X5D2U9 266 aa7.5□□□□□ -1.21
RFC4-201ENST00000296273 AGRNO00468 2067 aa7.49□□□□□ -1.21
RFC4-201ENST00000296273 C7orf71A4D174 169 aa7.49□□□□□ -1.21
RFC4-201ENST00000296273 LINC01549A6NIU2 74 aa7.49□□□□□ -1.21
RFC4-201ENST00000296273 A8MTW9 85 aa7.49□□□□□ -1.21
RFC4-201ENST00000296273 NXPH4O95158 308 aa7.49□□□□□ -1.21
RFC4-201ENST00000296273 G0S2P27469 103 aa7.49□□□□□ -1.21
RFC4-201ENST00000296273 CDKN1BP46527 198 aa7.49□□□□□ -1.21
RFC4-201ENST00000296273 RNF185Q96GF1 192 aa7.49□□□□□ -1.21
RFC4-201ENST00000296273 DKK2Q9UBU2 259 aa7.49□□□□□ -1.21
RFC4-201ENST00000296273 LINC00587B1AMM8 73 aa7.48□□□□□ -1.21
RFC4-201ENST00000296273 M0R381 172 aa7.48□□□□□ -1.21
RFC4-201ENST00000296273 EMP1P54849 157 aa7.48□□□□□ -1.21
RFC4-201ENST00000296273 ANXA2RQ3ZCQ2 193 aa7.48□□□□□ -1.21
RFC4-201ENST00000296273 CDPF1Q6NVV7 123 aa7.48□□□□□ -1.21
RFC4-201ENST00000296273 C20orf78Q9BR46 151 aa7.48□□□□□ -1.21
RFC4-201ENST00000296273 DPH3P1Q9H4G8 78 aa7.48□□□□□ -1.21
RFC4-201ENST00000296273 IGHV3OR16-12A0A075B7B8 117 aa7.47□□□□□ -1.21
RFC4-201ENST00000296273 C16orf90A8MZG2 172 aa7.47□□□□□ -1.21
RFC4-201ENST00000296273 SYS1-DBNDD2H3BUS1 97 aa7.47□□□□□ -1.21
RFC4-201ENST00000296273 TNFRSF6BO95407 300 aa7.47□□□□□ -1.21
RFC4-201ENST00000296273 HBDP02042 147 aa7.47□□□□□ -1.21
RFC4-201ENST00000296273 PRR9Q5T870 116 aa7.47□□□□□ -1.21
RFC4-201ENST00000296273 FAM222AQ5U5X8 452 aa7.47□□□□□ -1.21
RFC4-201ENST00000296273 Q8N8P6 123 aa7.47□□□□□ -1.21
RFC4-201ENST00000296273 Q8N976 141 aa7.47□□□□□ -1.21
RFC4-201ENST00000296273 C15orf53Q8NAA6 179 aa7.47□□□□□ -1.21
RFC4-201ENST00000296273 SYT8Q8NBV8 401 aa7.47□□□□□ -1.21
RFC4-201ENST00000296273 AP1S3Q96PC3 154 aa7.47□□□□□ -1.21
RFC4-201ENST00000296273 MIEN1Q9BRT3 115 aa7.47□□□□□ -1.21
RFC4-201ENST00000296273 TRGV11A0A075B6L2 103 aa7.46□□□□□ -1.21
RFC4-201ENST00000296273 TRAV9-2A0A087WT02 112 aa7.46□□□□□ -1.21
RFC4-201ENST00000296273 F6UB75 175 aa7.46□□□□□ -1.21
RFC4-201ENST00000296273 H3BVH4 76 aa7.46□□□□□ -1.21
RFC4-201ENST00000296273 IFI27P40305 119 aaPredicted RBP7.46□□□□□ -1.21
RFC4-201ENST00000296273 PIK3CD-AS1Q5SR53 167 aa7.46□□□□□ -1.21
RFC4-201ENST00000296273 MAPKAPK5-AS1Q8N8E1 139 aa7.46□□□□□ -1.21
RFC4-201ENST00000296273 LINC00467Q9BRT7 94 aa7.46□□□□□ -1.21
RFC4-201ENST00000296273 MSRB1Q9NZV6 116 aa7.46□□□□□ -1.21
RFC4-201ENST00000296273 GOLT1BQ9Y3E0 138 aa7.46□□□□□ -1.21
RFC4-201ENST00000296273 HSBP1L1C9JCN9 74 aa7.46□□□□□ -1.22
RFC4-201ENST00000296273 SMIM17P0DL12 118 aa7.46□□□□□ -1.22
RFC4-201ENST00000296273 PRB4P10163 310 aaPredicted RBP7.46□□□□□ -1.22
RFC4-201ENST00000296273 HTN3P15516 51 aa7.46□□□□□ -1.22
RFC4-201ENST00000296273 FCER1GP30273 86 aa7.46□□□□□ -1.22
RFC4-201ENST00000296273 RPL32P62910 135 aaKnown RBP7.46□□□□□ -1.22
RFC4-201ENST00000296273 CTAG1AP78358 180 aa7.46□□□□□ -1.22
RFC4-201ENST00000296273 PTH2Q96A98 100 aa7.46□□□□□ -1.22
RFC4-201ENST00000296273 PRO1933Q9H354 126 aa7.46□□□□□ -1.22
RFC4-201ENST00000296273 HSPG2P98160 4391 aa7.45□□□□□ -1.22
RFC4-201ENST00000296273 IGHV1OR15-1A0A075B7D0 117 aa7.45□□□□□ -1.22
RFC4-201ENST00000296273 NPYP01303 97 aa7.45□□□□□ -1.22
RFC4-201ENST00000296273 IGKV3-20P01619 116 aa7.45□□□□□ -1.22
RFC4-201ENST00000296273 EVI2AP22794 236 aa7.45□□□□□ -1.22
RFC4-201ENST00000296273 DAD1P61803 113 aa7.45□□□□□ -1.22
RFC4-201ENST00000296273 RRN3P1Q2M238 152 aa7.45□□□□□ -1.22
RFC4-201ENST00000296273 C4orf48Q5BLP8 95 aa7.45□□□□□ -1.22
RFC4-201ENST00000296273 ST20Q9HBF5 79 aa7.45□□□□□ -1.22
RFC4-201ENST00000296273 UQCR10Q9UDW1 63 aa7.45□□□□□ -1.22
RFC4-201ENST00000296273 TRAV12-3A0A0B4J271 114 aa7.44□□□□□ -1.22
RFC4-201ENST00000296273 MUC21A0A0G2JKD1 596 aa7.44□□□□□ -1.22
RFC4-201ENST00000296273 MUC21A0A140T8X8 626 aa7.44□□□□□ -1.22
RFC4-201ENST00000296273 LOC389332A0A1B0GUA5 103 aa7.44□□□□□ -1.22
RFC4-201ENST00000296273 TCAPO15273 167 aa7.44□□□□□ -1.22
RFC4-201ENST00000296273 ATP5LO75964 103 aa7.44□□□□□ -1.22
RFC4-201ENST00000296273 RNASE3P12724 160 aaKnown RBP7.44□□□□□ -1.22
RFC4-201ENST00000296273 FXYD7P58549 80 aa7.44□□□□□ -1.22
RFC4-201ENST00000296273 TNP2Q05952 138 aa7.44□□□□□ -1.22
RFC4-201ENST00000296273 SPATA45Q537H7 98 aa7.44□□□□□ -1.22
RFC4-201ENST00000296273 ORMDL2Q53FV1 153 aa7.44□□□□□ -1.22
RFC4-201ENST00000296273 MUC21Q5SSG8 566 aa7.44□□□□□ -1.22
RFC4-201ENST00000296273 LINC01545Q5VT33 79 aa7.44□□□□□ -1.22
RFC4-201ENST00000296273 AMTNQ6UX39 209 aa7.44□□□□□ -1.22
RFC4-201ENST00000296273 Q8N1X5 172 aa7.44□□□□□ -1.22
RFC4-201ENST00000296273 C6orf223Q8N319 242 aa7.44□□□□□ -1.22
RFC4-201ENST00000296273 C9orf85Q96MD7 179 aa7.44□□□□□ -1.22
RFC4-201ENST00000296273 ABCA13Q86UQ4 5058 aa7.43□□□□□ -1.22
RFC4-201ENST00000296273 IGHV3-16A0A0C4DH30 117 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 241.3 ms