RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 NACAE9PAV3 2078 aa13.47□□□□□ -0.25
CDC42EP3-201ENST00000295324 COX8AP10176 69 aa13.47□□□□□ -0.25
CDC42EP3-201ENST00000295324 RPL18AQ02543 176 aaKnown RBP13.47□□□□□ -0.25
CDC42EP3-201ENST00000295324 HERV-K104P63124 156 aa13.46□□□□□ -0.25
CDC42EP3-201ENST00000295324 SMIM9A6NGZ8 99 aa13.46□□□□□ -0.25
CDC42EP3-201ENST00000295324 BRWD1-AS2P59051 145 aa13.46□□□□□ -0.25
CDC42EP3-201ENST00000295324 K7EQG2 157 aa13.46□□□□□ -0.25
CDC42EP3-201ENST00000295324 CRYGBP07316 175 aa13.46□□□□□ -0.25
CDC42EP3-201ENST00000295324 ZFP2Q6ZN57 461 aa13.46□□□□□ -0.25
CDC42EP3-201ENST00000295324 CRIP3Q6Q6R5 217 aa13.46□□□□□ -0.26
CDC42EP3-201ENST00000295324 IGLL1P15814 213 aa13.46□□□□□ -0.26
CDC42EP3-201ENST00000295324 NUP210LQ5VU65 1888 aa13.45□□□□□ -0.26
CDC42EP3-201ENST00000295324 A0A1W2PPM0 123 aa13.45□□□□□ -0.26
CDC42EP3-201ENST00000295324 LINC01006Q8NI28 216 aa13.45□□□□□ -0.26
CDC42EP3-201ENST00000295324 PRO1854Q9UHT4 67 aa13.45□□□□□ -0.26
CDC42EP3-201ENST00000295324 CARD19Q96LW7 228 aa13.45□□□□□ -0.26
CDC42EP3-201ENST00000295324 SPATA25Q9BR10 227 aa13.45□□□□□ -0.26
CDC42EP3-201ENST00000295324 Q9H8V8 135 aa13.45□□□□□ -0.26
CDC42EP3-201ENST00000295324 Q6ZPA2 131 aa13.44□□□□□ -0.26
CDC42EP3-201ENST00000295324 CEND1Q8N111 149 aa13.44□□□□□ -0.26
CDC42EP3-201ENST00000295324 ODF3Q96PU9 254 aa13.44□□□□□ -0.26
CDC42EP3-201ENST00000295324 DSCR8Q96T75 97 aa13.44□□□□□ -0.26
CDC42EP3-201ENST00000295324 ZNF747Q9BV97 191 aa13.44□□□□□ -0.26
CDC42EP3-201ENST00000295324 GAGE12HA6NDE8 117 aa13.44□□□□□ -0.26
CDC42EP3-201ENST00000295324 BVES-AS1Q5T3Y7 98 aa13.44□□□□□ -0.26
CDC42EP3-201ENST00000295324 MBD6Q96DN6 1003 aa13.44□□□□□ -0.26
CDC42EP3-201ENST00000295324 TRAV4A0A0B4J268 109 aa13.44□□□□□ -0.26
CDC42EP3-201ENST00000295324 TRBV10-1A0A0K0K1A3 114 aa13.44□□□□□ -0.26
CDC42EP3-201ENST00000295324 TRAV12-1A0A0B4J245 112 aa13.44□□□□□ -0.26
CDC42EP3-201ENST00000295324 C1orf229Q6ZS94 237 aaPredicted RBP13.44□□□□□ -0.26
CDC42EP3-201ENST00000295324 BOD1L2Q8IYS8 172 aa13.44□□□□□ -0.26
CDC42EP3-201ENST00000295324 DKK2Q9UBU2 259 aa13.43□□□□□ -0.26
CDC42EP3-201ENST00000295324 VSIG2Q96IQ7 327 aa13.43□□□□□ -0.26
CDC42EP3-201ENST00000295324 MDFICQ9P1T7 246 aa13.43□□□□□ -0.26
CDC42EP3-201ENST00000295324 JMJD1CQ15652 2540 aa13.43□□□□□ -0.26
CDC42EP3-201ENST00000295324 ZNF702PQ9H963 129 aa13.42□□□□□ -0.26
CDC42EP3-201ENST00000295324 ANKRD11Q6UB99 2663 aaPredicted RBP13.42□□□□□ -0.26
CDC42EP3-201ENST00000295324 CTRLP40313 264 aa13.42□□□□□ -0.26
CDC42EP3-201ENST00000295324 TIRAPP58753 221 aa13.42□□□□□ -0.26
CDC42EP3-201ENST00000295324 KLK12Q9UKR0 248 aa13.41□□□□□ -0.26
CDC42EP3-201ENST00000295324 LYRM9A8MSI8 78 aa13.41□□□□□ -0.26
CDC42EP3-201ENST00000295324 C11orf1Q9H5F2 150 aa13.41□□□□□ -0.26
CDC42EP3-201ENST00000295324 ANKRD29Q8N6D5 301 aa13.41□□□□□ -0.26
CDC42EP3-201ENST00000295324 H3BMG7 143 aa13.4□□□□□ -0.26
CDC42EP3-201ENST00000295324 EIF4EBP1Q13541 118 aaPredicted RBP13.4□□□□□ -0.26
CDC42EP3-201ENST00000295324 ZFYVE26Q68DK2 2539 aa13.4□□□□□ -0.26
CDC42EP3-201ENST00000295324 K7ERJ3 54 aa13.4□□□□□ -0.26
CDC42EP3-201ENST00000295324 ARHGAP21Q5T5U3 1957 aa13.39□□□□□ -0.27
CDC42EP3-201ENST00000295324 TMEM258P61165 79 aa13.39□□□□□ -0.27
CDC42EP3-201ENST00000295324 TINCRA0A1B0GVN0 87 aa13.39□□□□□ -0.27
CDC42EP3-201ENST00000295324 GTSF1Q8WW33 167 aa13.39□□□□□ -0.27
CDC42EP3-201ENST00000295324 NDUFA1O15239 70 aa13.39□□□□□ -0.27
CDC42EP3-201ENST00000295324 PSMB8P28062 276 aa13.39□□□□□ -0.27
CDC42EP3-201ENST00000295324 A0A0J9YXV3 536 aa13.39□□□□□ -0.27
CDC42EP3-201ENST00000295324 ETDCA0A1B0GVM5 59 aa13.39□□□□□ -0.27
CDC42EP3-201ENST00000295324 PLA2G2EQ9NZK7 142 aa13.38□□□□□ -0.27
CDC42EP3-201ENST00000295324 LRP4O75096 1905 aa13.38□□□□□ -0.27
CDC42EP3-201ENST00000295324 RBM3P98179 157 aaKnown RBP13.38□□□□□ -0.27
CDC42EP3-201ENST00000295324 FAM222AQ5U5X8 452 aa13.38□□□□□ -0.27
CDC42EP3-201ENST00000295324 KRTAP10-9P60411 292 aa13.38□□□□□ -0.27
CDC42EP3-201ENST00000295324 C10orf99Q6UWK7 81 aa13.38□□□□□ -0.27
CDC42EP3-201ENST00000295324 Q8N6K4 173 aa13.38□□□□□ -0.27
CDC42EP3-201ENST00000295324 CRYBA4P53673 196 aa13.38□□□□□ -0.27
CDC42EP3-201ENST00000295324 RNF183Q96D59 192 aa13.38□□□□□ -0.27
CDC42EP3-201ENST00000295324 COL5A1P20908 1838 aaPredicted RBP13.37□□□□□ -0.27
CDC42EP3-201ENST00000295324 PRSS47A8MTI9 375 aa13.37□□□□□ -0.27
CDC42EP3-201ENST00000295324 hADV29S1A0JD25 119 aa13.36□□□□□ -0.27
CDC42EP3-201ENST00000295324 C15orf53Q8NAA6 179 aa13.36□□□□□ -0.27
CDC42EP3-201ENST00000295324 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.36□□□□□ -0.27
CDC42EP3-201ENST00000295324 SIVA1O15304 175 aa13.36□□□□□ -0.27
CDC42EP3-201ENST00000295324 TRAV26-1A0A087WT03 109 aa13.35□□□□□ -0.27
CDC42EP3-201ENST00000295324 MIFP14174 115 aa13.35□□□□□ -0.27
CDC42EP3-201ENST00000295324 NTN5Q8WTR8 489 aaPredicted RBP13.35□□□□□ -0.27
CDC42EP3-201ENST00000295324 ZFAND3Q9H8U3 227 aa13.35□□□□□ -0.27
CDC42EP3-201ENST00000295324 SPANXCQ9NY87 97 aa13.35□□□□□ -0.27
CDC42EP3-201ENST00000295324 DEFB131BA0A096LNP1 70 aa13.35□□□□□ -0.27
CDC42EP3-201ENST00000295324 Q6ZTI0 123 aa13.35□□□□□ -0.27
CDC42EP3-201ENST00000295324 COX7B2Q8TF08 81 aa13.35□□□□□ -0.27
CDC42EP3-201ENST00000295324 SPTBN4Q9H254 2564 aa13.35□□□□□ -0.27
CDC42EP3-201ENST00000295324 CXCL5P42830 114 aa13.34□□□□□ -0.27
CDC42EP3-201ENST00000295324 C12orf74Q32Q52 190 aa13.34□□□□□ -0.27
CDC42EP3-201ENST00000295324 TIMM17AQ99595 171 aa13.34□□□□□ -0.27
CDC42EP3-201ENST00000295324 LINC00482Q8N8I6 264 aa13.34□□□□□ -0.27
CDC42EP3-201ENST00000295324 C19orf71A6NCJ1 209 aa13.33□□□□□ -0.27
CDC42EP3-201ENST00000295324 RS1O15537 224 aa13.33□□□□□ -0.28
CDC42EP3-201ENST00000295324 RPL39P62891 51 aaKnown RBP13.33□□□□□ -0.28
CDC42EP3-201ENST00000295324 C14orf177Q52M58 125 aa13.33□□□□□ -0.28
CDC42EP3-201ENST00000295324 SPAG11BQ08648 103 aa13.32□□□□□ -0.28
CDC42EP3-201ENST00000295324 NDUFA7O95182 113 aa13.31□□□□□ -0.28
CDC42EP3-201ENST00000295324 NDUFS5O43920 106 aa13.31□□□□□ -0.28
CDC42EP3-201ENST00000295324 FAM110AQ9BQ89 295 aa13.3□□□□□ -0.28
CDC42EP3-201ENST00000295324 C20orf203Q8NBC4 194 aa13.3□□□□□ -0.28
CDC42EP3-201ENST00000295324 ABCA12Q86UK0 2595 aa13.3□□□□□ -0.28
CDC42EP3-201ENST00000295324 AVPP01185 164 aa13.3□□□□□ -0.28
CDC42EP3-201ENST00000295324 C5orf47Q569G3 176 aa13.3□□□□□ -0.28
CDC42EP3-201ENST00000295324 CFC1BP0CG36 223 aa13.3□□□□□ -0.28
CDC42EP3-201ENST00000295324 CFC1P0CG37 223 aa13.3□□□□□ -0.28
CDC42EP3-201ENST00000295324 ZNF80P51504 273 aaPredicted RBP13.3□□□□□ -0.28
CDC42EP3-201ENST00000295324 SMR3AQ99954 134 aa13.3□□□□□ -0.28
CDC42EP3-201ENST00000295324 CCL25O15444 150 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms