RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 TRBV27A0A0K0K1C4 114 aa12.66□□□□□ -0.38
SPG7-201ENST00000268704 PAPPA-AS1Q5QFB9 102 aa12.66□□□□□ -0.38
SPG7-201ENST00000268704 SHISA2Q6UWI4 295 aa12.66□□□□□ -0.38
SPG7-201ENST00000268704 Q8N1Y9 231 aa12.66□□□□□ -0.38
SPG7-201ENST00000268704 C3orf56Q8N813 242 aa12.66□□□□□ -0.38
SPG7-201ENST00000268704 A6NDX4 124 aa12.65□□□□□ -0.38
SPG7-201ENST00000268704 LGALS3P17931 250 aaKnown RBP12.65□□□□□ -0.38
SPG7-201ENST00000268704 RPL32P62910 135 aaKnown RBP12.65□□□□□ -0.38
SPG7-201ENST00000268704 IGHV3-16A0A0C4DH30 117 aa12.65□□□□□ -0.38
SPG7-201ENST00000268704 TRBV7-9A0A0J9YWB2 115 aa12.65□□□□□ -0.38
SPG7-201ENST00000268704 C10orf126Q8N4M7 172 aa12.65□□□□□ -0.38
SPG7-201ENST00000268704 LGALS9O00182 355 aa12.65□□□□□ -0.38
SPG7-201ENST00000268704 SCGB1C2P0DMR2 95 aa12.65□□□□□ -0.38
SPG7-201ENST00000268704 SPINK13Q1W4C9 94 aa12.65□□□□□ -0.38
SPG7-201ENST00000268704 ZANQ9Y493 2812 aa12.64□□□□□ -0.39
SPG7-201ENST00000268704 C2CD3Q4AC94 2353 aa12.64□□□□□ -0.39
SPG7-201ENST00000268704 CENPEQ02224 2701 aa12.64□□□□□ -0.39
SPG7-201ENST00000268704 A4D1N5 150 aa12.64□□□□□ -0.39
SPG7-201ENST00000268704 M0QY20 66 aa12.64□□□□□ -0.39
SPG7-201ENST00000268704 IGLV1-40P01703 118 aa12.64□□□□□ -0.39
SPG7-201ENST00000268704 P0DMU3 169 aa12.64□□□□□ -0.39
SPG7-201ENST00000268704 FAM231AP0DMU4 169 aa12.64□□□□□ -0.39
SPG7-201ENST00000268704 FAM231CP0DMU5 169 aa12.64□□□□□ -0.39
SPG7-201ENST00000268704 ATP6V0E2Q8NHE4 81 aa12.64□□□□□ -0.39
SPG7-201ENST00000268704 TRAV2A0A0B4J234 112 aa12.63□□□□□ -0.39
SPG7-201ENST00000268704 ID1P41134 155 aa12.63□□□□□ -0.39
SPG7-201ENST00000268704 PRO1854Q9UHT4 67 aa12.63□□□□□ -0.39
SPG7-201ENST00000268704 ADARB2-AS1A8MUL3 147 aa12.63□□□□□ -0.39
SPG7-201ENST00000268704 H3BUA1 57 aa12.63□□□□□ -0.39
SPG7-201ENST00000268704 TRPT1Q86TN4 253 aaKnown RBP12.63□□□□□ -0.39
SPG7-201ENST00000268704 TEN1Q86WV5 123 aa12.63□□□□□ -0.39
SPG7-201ENST00000268704 C9orf85Q96MD7 179 aa12.63□□□□□ -0.39
SPG7-201ENST00000268704 ANKRD29Q8N6D5 301 aa12.62□□□□□ -0.39
SPG7-201ENST00000268704 IGSF10Q6WRI0 2623 aa12.62□□□□□ -0.39
SPG7-201ENST00000268704 A0A0J9YXV3 536 aa12.62□□□□□ -0.39
SPG7-201ENST00000268704 AVPP01185 164 aa12.62□□□□□ -0.39
SPG7-201ENST00000268704 IGHV3-73A0A0B4J1V6 119 aa12.61□□□□□ -0.39
SPG7-201ENST00000268704 HTN1P15515 57 aa12.61□□□□□ -0.39
SPG7-201ENST00000268704 PPDPFLQ8WWR9 84 aa12.61□□□□□ -0.39
SPG7-201ENST00000268704 DUX5Q96PT3 197 aa12.61□□□□□ -0.39
SPG7-201ENST00000268704 FLNCQ14315 2725 aa12.61□□□□□ -0.39
SPG7-201ENST00000268704 TRBV6-5A0A0K0K1A5 114 aa12.6□□□□□ -0.39
SPG7-201ENST00000268704 TMEM223A0PJW6 202 aa12.6□□□□□ -0.39
SPG7-201ENST00000268704 SMIM20Q8N5G0 67 aa12.6□□□□□ -0.39
SPG7-201ENST00000268704 ERG28Q9UKR5 140 aa12.6□□□□□ -0.39
SPG7-201ENST00000268704 IGHV4-30-2A0A087WSY4 118 aa12.6□□□□□ -0.39
SPG7-201ENST00000268704 ELANEP08246 267 aa12.6□□□□□ -0.39
SPG7-201ENST00000268704 ZNF22P17026 224 aaPredicted RBP12.6□□□□□ -0.39
SPG7-201ENST00000268704 RNASE13Q5GAN3 156 aaKnown RBP12.6□□□□□ -0.39
SPG7-201ENST00000268704 LYRM7Q5U5X0 104 aa12.6□□□□□ -0.39
SPG7-201ENST00000268704 PIMREGQ9BSJ6 248 aa12.6□□□□□ -0.39
SPG7-201ENST00000268704 A8MWV9 139 aa12.6□□□□□ -0.39
SPG7-201ENST00000268704 CFHR3Q02985 330 aa12.6□□□□□ -0.39
SPG7-201ENST00000268704 A0A0J9YX75 114 aa12.59□□□□□ -0.39
SPG7-201ENST00000268704 PRM2P04554 102 aa12.59□□□□□ -0.39
SPG7-201ENST00000268704 GNLYP22749 145 aa12.59□□□□□ -0.39
SPG7-201ENST00000268704 HERV-K104P63124 156 aa12.59□□□□□ -0.39
SPG7-201ENST00000268704 CEMP1Q6PRD7 247 aaPredicted RBP12.59□□□□□ -0.39
SPG7-201ENST00000268704 MUSTN1Q8IVN3 82 aa12.59□□□□□ -0.39
SPG7-201ENST00000268704 BRI3O95415 125 aa12.59□□□□□ -0.39
SPG7-201ENST00000268704 PROK1P58294 105 aa12.58□□□□□ -0.39
SPG7-201ENST00000268704 NSUN5P1Q3KNT7 163 aa12.58□□□□□ -0.39
SPG7-201ENST00000268704 NACAE9PAV3 2078 aa12.58□□□□□ -0.4
SPG7-201ENST00000268704 C9JAW5 83 aa12.58□□□□□ -0.4
SPG7-201ENST00000268704 RHODO00212 210 aa12.58□□□□□ -0.4
SPG7-201ENST00000268704 C20orf203Q8NBC4 194 aa12.58□□□□□ -0.4
SPG7-201ENST00000268704 PRRC2AP48634 2157 aaKnown RBP12.58□□□□□ -0.4
SPG7-201ENST00000268704 CCDC179H3BU77 68 aa12.58□□□□□ -0.4
SPG7-201ENST00000268704 LEPROTO15243 131 aa12.58□□□□□ -0.4
SPG7-201ENST00000268704 USP9YO00507 2555 aaPredicted RBP12.57□□□□□ -0.4
SPG7-201ENST00000268704 IGLV4-3A0A075B6K6 122 aa12.57□□□□□ -0.4
SPG7-201ENST00000268704 IGHV1OR15-1A0A075B7D0 117 aa12.57□□□□□ -0.4
SPG7-201ENST00000268704 IGHV3-33P01772 117 aa12.57□□□□□ -0.4
SPG7-201ENST00000268704 C10orf105Q8TEF2 133 aa12.57□□□□□ -0.4
SPG7-201ENST00000268704 SPXQ9BT56 116 aa12.57□□□□□ -0.4
SPG7-201ENST00000268704 CFAP46Q8IYW2 2715 aa12.57□□□□□ -0.4
SPG7-201ENST00000268704 CRLF1O75462 422 aa12.57□□□□□ -0.4
SPG7-201ENST00000268704 TMEM263Q8WUH6 116 aaKnown RBP12.57□□□□□ -0.4
SPG7-201ENST00000268704 BEX4Q9NWD9 120 aaPredicted RBP12.57□□□□□ -0.4
SPG7-201ENST00000268704 Q9UF83 564 aa12.57□□□□□ -0.4
SPG7-201ENST00000268704 SETD2Q9BYW2 2564 aaPredicted RBP12.56□□□□□ -0.4
SPG7-201ENST00000268704 K7EMT4 169 aa12.56□□□□□ -0.4
SPG7-201ENST00000268704 TRAV8-3A0A0A6YYJ7 113 aa12.56□□□□□ -0.4
SPG7-201ENST00000268704 SLC25A20O43772 301 aa12.56□□□□□ -0.4
SPG7-201ENST00000268704 SYNJ2BPP57105 145 aa12.56□□□□□ -0.4
SPG7-201ENST00000268704 SBSPONQ8IVN8 264 aa12.56□□□□□ -0.4
SPG7-201ENST00000268704 TEX29Q8N6K0 151 aa12.56□□□□□ -0.4
SPG7-201ENST00000268704 CCL19Q99731 98 aa12.56□□□□□ -0.4
SPG7-201ENST00000268704 IGHV4-59P01825 116 aa12.56□□□□□ -0.4
SPG7-201ENST00000268704 PSMB8P28062 276 aa12.56□□□□□ -0.4
SPG7-201ENST00000268704 RBMY1A1P0DJD3 496 aaKnown RBP12.55□□□□□ -0.4
SPG7-201ENST00000268704 RBMY1CP0DJD4 496 aa12.55□□□□□ -0.4
SPG7-201ENST00000268704 SNRPD3P62318 126 aaKnown RBP12.55□□□□□ -0.4
SPG7-201ENST00000268704 RBMY1FQ15415 496 aaKnown RBP12.55□□□□□ -0.4
SPG7-201ENST00000268704 RHOHQ15669 191 aa12.55□□□□□ -0.4
SPG7-201ENST00000268704 Q1RN00 199 aa12.55□□□□□ -0.4
SPG7-201ENST00000268704 ZFAND6Q6FIF0 208 aa12.55□□□□□ -0.4
SPG7-201ENST00000268704 VCX2Q9H322 139 aa12.55□□□□□ -0.4
SPG7-201ENST00000268704 KMT2BQ9UMN6 2715 aaPredicted RBP12.55□□□□□ -0.4
SPG7-201ENST00000268704 TRAV4A0A0B4J268 109 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 629 ms