RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 EIF4EBP3O60516 100 aaPredicted RBP12.52□□□□□ -0.4
RTN1-201ENST00000267484 TRAV2A0A0B4J234 112 aa12.52□□□□□ -0.41
RTN1-201ENST00000267484 PAPPA-AS1Q5QFB9 102 aa12.52□□□□□ -0.41
RTN1-201ENST00000267484 LGALS9O00182 355 aa12.52□□□□□ -0.41
RTN1-201ENST00000267484 TRBV7-9A0A0J9YWB2 115 aa12.51□□□□□ -0.41
RTN1-201ENST00000267484 A0A0J9YXV3 536 aa12.51□□□□□ -0.41
RTN1-201ENST00000267484 A4D1N5 150 aa12.51□□□□□ -0.41
RTN1-201ENST00000267484 MT-ATP8P03928 68 aa12.51□□□□□ -0.41
RTN1-201ENST00000267484 H3BUA1 57 aa12.51□□□□□ -0.41
RTN1-201ENST00000267484 RNASE13Q5GAN3 156 aaKnown RBP12.51□□□□□ -0.41
RTN1-201ENST00000267484 RPL32P62910 135 aaKnown RBP12.5□□□□□ -0.41
RTN1-201ENST00000267484 C10orf126Q8N4M7 172 aa12.5□□□□□ -0.41
RTN1-201ENST00000267484 USP9XQ93008 2570 aaPredicted RBP12.5□□□□□ -0.41
RTN1-201ENST00000267484 SCGB1A1P11684 91 aa12.5□□□□□ -0.41
RTN1-201ENST00000267484 PROK1P58294 105 aa12.5□□□□□ -0.41
RTN1-201ENST00000267484 CEMP1Q6PRD7 247 aaPredicted RBP12.5□□□□□ -0.41
RTN1-201ENST00000267484 C9orf85Q96MD7 179 aa12.5□□□□□ -0.41
RTN1-201ENST00000267484 CIDEAO60543 219 aa12.5□□□□□ -0.41
RTN1-201ENST00000267484 TRPT1Q86TN4 253 aaKnown RBP12.5□□□□□ -0.41
RTN1-201ENST00000267484 C10orf105Q8TEF2 133 aa12.5□□□□□ -0.41
RTN1-201ENST00000267484 CCL19Q99731 98 aa12.5□□□□□ -0.41
RTN1-201ENST00000267484 ATP5J2P56134 94 aa12.49□□□□□ -0.41
RTN1-201ENST00000267484 PRO1854Q9UHT4 67 aa12.49□□□□□ -0.41
RTN1-201ENST00000267484 A0A0J9YX75 114 aa12.49□□□□□ -0.41
RTN1-201ENST00000267484 IGHV4-59P01825 116 aa12.49□□□□□ -0.41
RTN1-201ENST00000267484 NRGNQ92686 78 aa12.49□□□□□ -0.41
RTN1-201ENST00000267484 SYNJ2BPP57105 145 aa12.49□□□□□ -0.41
RTN1-201ENST00000267484 CFHR3Q02985 330 aa12.49□□□□□ -0.41
RTN1-201ENST00000267484 XGP55808 180 aa12.48□□□□□ -0.41
RTN1-201ENST00000267484 Q9UF83 564 aa12.48□□□□□ -0.41
RTN1-201ENST00000267484 PKD1L2Q7Z442 2459 aa12.48□□□□□ -0.41
RTN1-201ENST00000267484 CKS1BP61024 79 aa12.48□□□□□ -0.41
RTN1-201ENST00000267484 ZNF22P17026 224 aaPredicted RBP12.47□□□□□ -0.41
RTN1-201ENST00000267484 MUSTN1Q8IVN3 82 aa12.47□□□□□ -0.41
RTN1-201ENST00000267484 IGHV1OR15-1A0A075B7D0 117 aa12.47□□□□□ -0.41
RTN1-201ENST00000267484 TRBV6-5A0A0K0K1A5 114 aa12.47□□□□□ -0.41
RTN1-201ENST00000267484 TMEM223A0PJW6 202 aa12.47□□□□□ -0.41
RTN1-201ENST00000267484 SPINK8P0C7L1 97 aa12.47□□□□□ -0.41
RTN1-201ENST00000267484 ANKRD29Q8N6D5 301 aa12.47□□□□□ -0.41
RTN1-201ENST00000267484 SPXQ9BT56 116 aa12.47□□□□□ -0.41
RTN1-201ENST00000267484 KNCNA6PVL3 124 aa12.47□□□□□ -0.41
RTN1-201ENST00000267484 MSMBP08118 114 aa12.47□□□□□ -0.41
RTN1-201ENST00000267484 ELANEP08246 267 aa12.47□□□□□ -0.41
RTN1-201ENST00000267484 TEN1Q86WV5 123 aa12.46□□□□□ -0.41
RTN1-201ENST00000267484 BEX4Q9NWD9 120 aaPredicted RBP12.46□□□□□ -0.41
RTN1-201ENST00000267484 BRI3O95415 125 aa12.46□□□□□ -0.41
RTN1-201ENST00000267484 C20orf203Q8NBC4 194 aa12.46□□□□□ -0.41
RTN1-201ENST00000267484 MAPK1IP1LQ8NDC0 245 aa12.46□□□□□ -0.41
RTN1-201ENST00000267484 K7EMT4 169 aa12.46□□□□□ -0.42
RTN1-201ENST00000267484 PSMB8P28062 276 aa12.46□□□□□ -0.42
RTN1-201ENST00000267484 ATP6V0E2Q8NHE4 81 aa12.46□□□□□ -0.42
RTN1-201ENST00000267484 MXRA5Q9NR99 2828 aa12.45□□□□□ -0.42
RTN1-201ENST00000267484 NACAE9PAV3 2078 aa12.45□□□□□ -0.42
RTN1-201ENST00000267484 A0A1B0GV72 72 aa12.45□□□□□ -0.42
RTN1-201ENST00000267484 A8MWV9 139 aa12.45□□□□□ -0.42
RTN1-201ENST00000267484 RHODO00212 210 aa12.45□□□□□ -0.42
RTN1-201ENST00000267484 SNRPD3P62318 126 aaKnown RBP12.45□□□□□ -0.42
RTN1-201ENST00000267484 IGLV4-3A0A075B6K6 122 aa12.45□□□□□ -0.42
RTN1-201ENST00000267484 TRAV8-3A0A0A6YYJ7 113 aa12.45□□□□□ -0.42
RTN1-201ENST00000267484 RBMY1A1P0DJD3 496 aaKnown RBP12.45□□□□□ -0.42
RTN1-201ENST00000267484 RBMY1CP0DJD4 496 aa12.45□□□□□ -0.42
RTN1-201ENST00000267484 RBMY1FQ15415 496 aaKnown RBP12.45□□□□□ -0.42
RTN1-201ENST00000267484 PPDPFLQ8WWR9 84 aa12.45□□□□□ -0.42
RTN1-201ENST00000267484 A8MZ25 164 aa12.44□□□□□ -0.42
RTN1-201ENST00000267484 C9JAW5 83 aa12.44□□□□□ -0.42
RTN1-201ENST00000267484 VCX2Q9H322 139 aa12.44□□□□□ -0.42
RTN1-201ENST00000267484 NSUN5P1Q3KNT7 163 aa12.44□□□□□ -0.42
RTN1-201ENST00000267484 PRRC2AP48634 2157 aaKnown RBP12.44□□□□□ -0.42
RTN1-201ENST00000267484 LEPROTO15243 131 aa12.44□□□□□ -0.42
RTN1-201ENST00000267484 NPC2P61916 151 aa12.44□□□□□ -0.42
RTN1-201ENST00000267484 DEFB112Q30KQ8 113 aa12.44□□□□□ -0.42
RTN1-201ENST00000267484 Q6ZUT4 128 aa12.44□□□□□ -0.42
RTN1-201ENST00000267484 MYO9AB2RTY4 2548 aa12.44□□□□□ -0.42
RTN1-201ENST00000267484 MYO18BQ8IUG5 2567 aa12.44□□□□□ -0.42
RTN1-201ENST00000267484 K7EQG2 157 aa12.43□□□□□ -0.42
RTN1-201ENST00000267484 Q1RN00 199 aa12.43□□□□□ -0.42
RTN1-201ENST00000267484 LYRM7Q5U5X0 104 aa12.43□□□□□ -0.42
RTN1-201ENST00000267484 I3L3M4 83 aa12.43□□□□□ -0.42
RTN1-201ENST00000267484 IGHV3-33P01772 117 aa12.43□□□□□ -0.42
RTN1-201ENST00000267484 HIST2H2BDQ6DRA6 164 aa12.43□□□□□ -0.42
RTN1-201ENST00000267484 TMEM263Q8WUH6 116 aaKnown RBP12.43□□□□□ -0.42
RTN1-201ENST00000267484 TRBV20-1A0A075B6N2 111 aa12.42□□□□□ -0.42
RTN1-201ENST00000267484 RHOHQ15669 191 aa12.42□□□□□ -0.42
RTN1-201ENST00000267484 CRYBA4P53673 196 aa12.42□□□□□ -0.42
RTN1-201ENST00000267484 SLC25A20O43772 301 aa12.41□□□□□ -0.42
RTN1-201ENST00000267484 PRSS2P07478 247 aa12.41□□□□□ -0.42
RTN1-201ENST00000267484 CD28P10747 220 aa12.41□□□□□ -0.42
RTN1-201ENST00000267484 ERG28Q9UKR5 140 aa12.41□□□□□ -0.42
RTN1-201ENST00000267484 CACNA1AO00555 2505 aa12.41□□□□□ -0.42
RTN1-201ENST00000267484 Q6ZSV7 163 aa12.41□□□□□ -0.42
RTN1-201ENST00000267484 FAM104AQ969W3 186 aa12.4□□□□□ -0.42
RTN1-201ENST00000267484 A0A0J9YXY3 114 aa12.4□□□□□ -0.42
RTN1-201ENST00000267484 IGHV3-30-3P0DP02 117 aa12.4□□□□□ -0.42
RTN1-201ENST00000267484 DEFB136Q30KP8 78 aa12.4□□□□□ -0.42
RTN1-201ENST00000267484 ACACBO00763 2458 aa12.4□□□□□ -0.42
RTN1-201ENST00000267484 FAM208BQ5VWN6 2430 aa12.4□□□□□ -0.42
RTN1-201ENST00000267484 CLUHP3Q96NS8 147 aa12.39□□□□□ -0.43
RTN1-201ENST00000267484 GEMIN7Q9H840 131 aaKnown RBP12.39□□□□□ -0.43
RTN1-201ENST00000267484 DOPEY1Q5JWR5 2465 aa12.39□□□□□ -0.43
RTN1-201ENST00000267484 SBSPONQ8IVN8 264 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms