RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 H3BTX0 84 aa14.26□□□□□ -0.13
COL4A3BP-201ENST00000261415 LGALS1P09382 135 aaKnown RBP14.26□□□□□ -0.13
COL4A3BP-201ENST00000261415 DNAJC30Q96LL9 226 aa14.26□□□□□ -0.13
COL4A3BP-201ENST00000261415 CRIP1P50238 77 aa14.26□□□□□ -0.13
COL4A3BP-201ENST00000261415 IGHV3OR16-8A0A075B7F1 116 aa14.25□□□□□ -0.13
COL4A3BP-201ENST00000261415 CLPSL1A2RUU4 121 aa14.25□□□□□ -0.13
COL4A3BP-201ENST00000261415 TMEM78Q5T7P6 136 aa14.25□□□□□ -0.13
COL4A3BP-201ENST00000261415 MRPL23Q16540 153 aaKnown RBP14.25□□□□□ -0.13
COL4A3BP-201ENST00000261415 KHDC1LQ5JSQ8 128 aa14.25□□□□□ -0.13
COL4A3BP-201ENST00000261415 TMSB15BA0A087X1C1 80 aa14.24□□□□□ -0.13
COL4A3BP-201ENST00000261415 PROK1P58294 105 aa14.24□□□□□ -0.13
COL4A3BP-201ENST00000261415 EXOC3-AS1Q8N2X6 119 aa14.24□□□□□ -0.13
COL4A3BP-201ENST00000261415 WIPF1O43516 503 aa14.23□□□□□ -0.13
COL4A3BP-201ENST00000261415 SLC25A20O43772 301 aa14.23□□□□□ -0.13
COL4A3BP-201ENST00000261415 HIST2H2BDQ6DRA6 164 aa14.23□□□□□ -0.13
COL4A3BP-201ENST00000261415 C18orf65Q6ZTR6 163 aa14.23□□□□□ -0.13
COL4A3BP-201ENST00000261415 LYPD1Q8N2G4 141 aa14.23□□□□□ -0.13
COL4A3BP-201ENST00000261415 C11orf44Q8N8P7 122 aa14.23□□□□□ -0.13
COL4A3BP-201ENST00000261415 AAMDCQ9H7C9 122 aa14.23□□□□□ -0.13
COL4A3BP-201ENST00000261415 H3BRN7 92 aa14.22□□□□□ -0.13
COL4A3BP-201ENST00000261415 NDUFA4O00483 81 aa14.22□□□□□ -0.13
COL4A3BP-201ENST00000261415 CD28P10747 220 aa14.22□□□□□ -0.13
COL4A3BP-201ENST00000261415 Q8N8P6 123 aa14.22□□□□□ -0.13
COL4A3BP-201ENST00000261415 SHANK2-AS3Q9BTD1 123 aa14.22□□□□□ -0.13
COL4A3BP-201ENST00000261415 TNFRSF6BO95407 300 aa14.22□□□□□ -0.13
COL4A3BP-201ENST00000261415 UNQ9165/PRO28630Q6UXU0 137 aa14.22□□□□□ -0.13
COL4A3BP-201ENST00000261415 C4orf3Q8WVX3 66 aa14.22□□□□□ -0.13
COL4A3BP-201ENST00000261415 H7C1H1 209 aa14.21□□□□□ -0.13
COL4A3BP-201ENST00000261415 SRSF9Q13242 221 aaKnown RBP eCLIP14.21□□□□□ -0.13
COL4A3BP-201ENST00000261415 TRAV12-1A0A0B4J245 112 aa14.21□□□□□ -0.14
COL4A3BP-201ENST00000261415 SFTA2Q6UW10 78 aa14.21□□□□□ -0.14
COL4A3BP-201ENST00000261415 NDUFA11Q86Y39 141 aa14.21□□□□□ -0.14
COL4A3BP-201ENST00000261415 IGHV4OR15-8A0A075B7B6 117 aa14.2□□□□□ -0.14
COL4A3BP-201ENST00000261415 A0A087WW49 117 aa14.2□□□□□ -0.14
COL4A3BP-201ENST00000261415 CD7P09564 240 aa14.2□□□□□ -0.14
COL4A3BP-201ENST00000261415 KLHL30-AS1Q8NEE0 82 aa14.2□□□□□ -0.14
COL4A3BP-201ENST00000261415 F8VRH5 84 aa14.2□□□□□ -0.14
COL4A3BP-201ENST00000261415 DEFB136Q30KP8 78 aa14.2□□□□□ -0.14
COL4A3BP-201ENST00000261415 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.2□□□□□ -0.14
COL4A3BP-201ENST00000261415 RNF185Q96GF1 192 aa14.2□□□□□ -0.14
COL4A3BP-201ENST00000261415 AGRNO00468 2067 aa14.19□□□□□ -0.14
COL4A3BP-201ENST00000261415 C15orf53Q8NAA6 179 aa14.19□□□□□ -0.14
COL4A3BP-201ENST00000261415 CITED2Q99967 270 aaPredicted RBP14.19□□□□□ -0.14
COL4A3BP-201ENST00000261415 TRAV8-4A0A0B4J246 113 aa14.18□□□□□ -0.14
COL4A3BP-201ENST00000261415 GPHB5Q86YW7 130 aa14.18□□□□□ -0.14
COL4A3BP-201ENST00000261415 METTL26Q96S19 204 aa14.18□□□□□ -0.14
COL4A3BP-201ENST00000261415 LINC01587Q99440 93 aa14.18□□□□□ -0.14
COL4A3BP-201ENST00000261415 WNK1Q9H4A3 2382 aa14.18□□□□□ -0.14
COL4A3BP-201ENST00000261415 Q6ZQT7 251 aa14.18□□□□□ -0.14
COL4A3BP-201ENST00000261415 SPANXDQ9BXN6 97 aa14.18□□□□□ -0.14
COL4A3BP-201ENST00000261415 TRBV19A0A075B6N1 114 aa14.17□□□□□ -0.14
COL4A3BP-201ENST00000261415 TRAV25A0A0B4J276 109 aa14.17□□□□□ -0.14
COL4A3BP-201ENST00000261415 SCGB1D4Q6XE38 83 aa14.17□□□□□ -0.14
COL4A3BP-201ENST00000261415 SH2D1AO60880 128 aa14.17□□□□□ -0.14
COL4A3BP-201ENST00000261415 HOXD3P31249 432 aaPredicted RBP14.17□□□□□ -0.14
COL4A3BP-201ENST00000261415 LAGE3Q14657 143 aa14.17□□□□□ -0.14
COL4A3BP-201ENST00000261415 ODF3Q96PU9 254 aa14.17□□□□□ -0.14
COL4A3BP-201ENST00000261415 SPANXCQ9NY87 97 aa14.17□□□□□ -0.14
COL4A3BP-201ENST00000261415 A0A1W2PRX2 142 aa14.16□□□□□ -0.14
COL4A3BP-201ENST00000261415 SMIM9A6NGZ8 99 aa14.16□□□□□ -0.14
COL4A3BP-201ENST00000261415 Q8N1Y9 231 aa14.16□□□□□ -0.14
COL4A3BP-201ENST00000261415 C10orf126Q8N4M7 172 aa14.16□□□□□ -0.14
COL4A3BP-201ENST00000261415 LINC01600Q96MT4 127 aa14.16□□□□□ -0.14
COL4A3BP-201ENST00000261415 BUB3O43684 328 aa14.16□□□□□ -0.14
COL4A3BP-201ENST00000261415 DUSP14O95147 198 aaKnown RBP14.16□□□□□ -0.14
COL4A3BP-201ENST00000261415 RPL13AP40429 203 aaKnown RBP14.16□□□□□ -0.14
COL4A3BP-201ENST00000261415 COX8CQ7Z4L0 72 aa14.16□□□□□ -0.14
COL4A3BP-201ENST00000261415 U3KQE9 123 aa14.16□□□□□ -0.14
COL4A3BP-201ENST00000261415 IGLV2-18A0A075B6J9 118 aa14.15□□□□□ -0.14
COL4A3BP-201ENST00000261415 IGHV3-49A0A0A0MS15 119 aa14.15□□□□□ -0.14
COL4A3BP-201ENST00000261415 C9JAW5 83 aa14.15□□□□□ -0.14
COL4A3BP-201ENST00000261415 IGLC6P0CF74 106 aa14.15□□□□□ -0.14
COL4A3BP-201ENST00000261415 KRTAP10-3P60369 221 aa14.15□□□□□ -0.14
COL4A3BP-201ENST00000261415 DAZ1Q9NQZ3 744 aaKnown RBP14.15□□□□□ -0.14
COL4A3BP-201ENST00000261415 IGHV3OR16-13A0A075B7E8 117 aa14.15□□□□□ -0.14
COL4A3BP-201ENST00000261415 IGHV3-74A0A0B4J1X5 117 aa14.15□□□□□ -0.14
COL4A3BP-201ENST00000261415 TRAV2A0A0B4J234 112 aa14.15□□□□□ -0.14
COL4A3BP-201ENST00000261415 ZNF815PA8K554 130 aa14.15□□□□□ -0.14
COL4A3BP-201ENST00000261415 HLA-DMBP28068 263 aa14.15□□□□□ -0.14
COL4A3BP-201ENST00000261415 C8orf49Q96NF6 230 aa14.15□□□□□ -0.14
COL4A3BP-201ENST00000261415 DUX3Q96PT4 197 aa14.15□□□□□ -0.14
COL4A3BP-201ENST00000261415 CNFNQ9BYD5 112 aa14.15□□□□□ -0.14
COL4A3BP-201ENST00000261415 TENM1Q9UKZ4 2725 aa14.14□□□□□ -0.15
COL4A3BP-201ENST00000261415 IGHV3-66A0A0C4DH42 116 aa14.14□□□□□ -0.15
COL4A3BP-201ENST00000261415 MRPS12O15235 138 aaKnown RBP14.14□□□□□ -0.15
COL4A3BP-201ENST00000261415 SIGLEC15Q6ZMC9 328 aa14.14□□□□□ -0.15
COL4A3BP-201ENST00000261415 SLURP1P55000 103 aa14.13□□□□□ -0.15
COL4A3BP-201ENST00000261415 SYNJ2BPP57105 145 aa14.13□□□□□ -0.15
COL4A3BP-201ENST00000261415 ATRQ13535 2644 aa14.13□□□□□ -0.15
COL4A3BP-201ENST00000261415 K7EMT4 169 aa14.13□□□□□ -0.15
COL4A3BP-201ENST00000261415 LGALS9O00182 355 aa14.12□□□□□ -0.15
COL4A3BP-201ENST00000261415 LINC00694P0DN24 101 aa14.12□□□□□ -0.15
COL4A3BP-201ENST00000261415 RPL7P18124 248 aaKnown RBP14.12□□□□□ -0.15
COL4A3BP-201ENST00000261415 NTN5Q8WTR8 489 aaPredicted RBP14.12□□□□□ -0.15
COL4A3BP-201ENST00000261415 PRO1854Q9UHT4 67 aa14.12□□□□□ -0.15
COL4A3BP-201ENST00000261415 ASCL2Q99929 193 aa14.12□□□□□ -0.15
COL4A3BP-201ENST00000261415 PRADC1Q9BSG0 188 aa14.12□□□□□ -0.15
COL4A3BP-201ENST00000261415 ADARB2-AS1A8MUL3 147 aa14.11□□□□□ -0.15
COL4A3BP-201ENST00000261415 EDN2P20800 178 aa14.11□□□□□ -0.15
COL4A3BP-201ENST00000261415 IGHV7-4-1A0A0J9YVY3 117 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms