RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 CD24P25063 80 aa2.37□□□□□ -2.03
CCDC54-201ENST00000261058 PEBP1P30086 187 aaKnown RBP2.37□□□□□ -2.03
CCDC54-201ENST00000261058 MIAQ16674 131 aa2.37□□□□□ -2.03
CCDC54-201ENST00000261058 ESRGQ1W209 222 aa2.37□□□□□ -2.03
CCDC54-201ENST00000261058 SPANXN1Q5VSR9 72 aa2.37□□□□□ -2.03
CCDC54-201ENST00000261058 SDIM1Q6ZPB5 146 aa2.37□□□□□ -2.03
CCDC54-201ENST00000261058 LYZL2Q7Z4W2 148 aa2.37□□□□□ -2.03
CCDC54-201ENST00000261058 DYNAPQ8N1N2 210 aa2.37□□□□□ -2.03
CCDC54-201ENST00000261058 SMCR5Q8TEV8 140 aa2.37□□□□□ -2.03
CCDC54-201ENST00000261058 DYNLRB2Q8TF09 96 aa2.37□□□□□ -2.03
CCDC54-201ENST00000261058 CHCHD1Q96BP2 118 aaKnown RBP2.37□□□□□ -2.03
CCDC54-201ENST00000261058 CMC2Q9NRP2 79 aa2.37□□□□□ -2.03
CCDC54-201ENST00000261058 GNG13Q9P2W3 67 aa2.37□□□□□ -2.03
CCDC54-201ENST00000261058 CASP8AP2Q9UKL3 1982 aa2.37□□□□□ -2.03
CCDC54-201ENST00000261058 USP32Q8NFA0 1604 aa2.37□□□□□ -2.03
CCDC54-201ENST00000261058 NEXMIFQ5QGS0 1516 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 ZNF407Q9C0G0 2248 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 MYMXA0A1B0GTQ4 84 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 H3BMM0 161 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 H7BZZ5 65 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 XCL1P47992 114 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 UBE2D3P61077 147 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 UBE2D2P62837 147 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 DYNLT1P63172 113 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 KLKP1Q107X0 134 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 S100A7L2Q5SY68 101 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 MED12LQ86YW9 2145 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 LINC00269Q8N2A0 174 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 MUC7Q8TAX7 377 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 UBE2WQ96B02 151 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 IFI27L1Q96BM0 104 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 Q96M85 177 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 CYSTM1Q9H1C7 97 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 NHP2Q9NX24 153 aaKnown RBP2.36□□□□□ -2.03
CCDC54-201ENST00000261058 LINC00474Q9P2X8 69 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 PTPRMP28827 1452 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 TULP4Q9NRJ4 1543 aa2.36□□□□□ -2.03
CCDC54-201ENST00000261058 IGLV3-9A0A075B6K5 115 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 IGKV1D-17A0A075B6S4 117 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 A0A0B4J2C4 111 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 A0A1B0GWA3 101 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 HCRTO43612 131 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 LY6HO94772 140 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 TRGV3P03979 118 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 MSMBP08118 114 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 KISS1Q15726 138 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 NCBP2-AS2Q69YL0 99 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 LYPD5Q6UWN5 251 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 PP632Q6XCG6 107 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 ADM2Q7Z4H4 148 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 PFN4Q8NHR9 129 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 TMEM141Q96I45 108 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 SMIM7Q9BQ49 75 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 TIMM21Q9BVV7 248 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 LINC00574Q9H8X3 128 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 COL18A1P39060 1754 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 EXPH5Q8NEV8 1989 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 TANC2Q9HCD6 1990 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 AFDNP55196 1824 aaKnown RBP2.35□□□□□ -2.03
CCDC54-201ENST00000261058 PLCH1Q4KWH8 1693 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 CPS1P31327 1500 aa2.35□□□□□ -2.03
CCDC54-201ENST00000261058 SNRNP200O75643 2136 aaKnown RBP2.35□□□□□ -2.03
CCDC54-201ENST00000261058 C19orf71A6NCJ1 209 aa2.34□□□□□ -2.03
CCDC54-201ENST00000261058 A6NED7 52 aa2.34□□□□□ -2.03
CCDC54-201ENST00000261058 A6NIN4 97 aa2.34□□□□□ -2.03
CCDC54-201ENST00000261058 GNRH2O43555 120 aa2.34□□□□□ -2.03
CCDC54-201ENST00000261058 FXYD2P54710 66 aa2.34□□□□□ -2.03
CCDC54-201ENST00000261058 SNRPGP62308 76 aaKnown RBP2.34□□□□□ -2.03
CCDC54-201ENST00000261058 CYP4F30PQ9H0H9 118 aa2.34□□□□□ -2.03
CCDC54-201ENST00000261058 TSC2P49815 1807 aa2.34□□□□□ -2.03
CCDC54-201ENST00000261058 ZFC3H1O60293 1989 aaKnown RBP2.34□□□□□ -2.03
CCDC54-201ENST00000261058 LTBP4Q8N2S1 1624 aa2.34□□□□□ -2.04
CCDC54-201ENST00000261058 ALKQ9UM73 1620 aa2.34□□□□□ -2.04
CCDC54-201ENST00000261058 IGHV3-15A0A0B4J1V0 119 aa2.34□□□□□ -2.04
CCDC54-201ENST00000261058 IGHV3-73A0A0B4J1V6 119 aa2.34□□□□□ -2.04
CCDC54-201ENST00000261058 TRBV10-2A0A0K0K1G8 114 aa2.34□□□□□ -2.04
CCDC54-201ENST00000261058 H3BVH4 76 aa2.34□□□□□ -2.04
CCDC54-201ENST00000261058 LEPROTL1O95214 131 aa2.34□□□□□ -2.04
CCDC54-201ENST00000261058 KRTAP10-1P60331 282 aa2.34□□□□□ -2.04
CCDC54-201ENST00000261058 VMO1Q7Z5L0 202 aa2.34□□□□□ -2.04
CCDC54-201ENST00000261058 ST20-AS1Q8NBB2 130 aa2.34□□□□□ -2.04
CCDC54-201ENST00000261058 LINC00467Q9BRT7 94 aa2.34□□□□□ -2.04
CCDC54-201ENST00000261058 TTTY13Q9BZ97 58 aa2.34□□□□□ -2.04
CCDC54-201ENST00000261058 NDUFA12Q9UI09 145 aa2.34□□□□□ -2.04
CCDC54-201ENST00000261058 ICOSQ9Y6W8 199 aa2.34□□□□□ -2.04
CCDC54-201ENST00000261058 PTPRDP23468 1912 aa2.33□□□□□ -2.04
CCDC54-201ENST00000261058 ABCC8Q09428 1581 aa2.33□□□□□ -2.04
CCDC54-201ENST00000261058 KIF21BO75037 1637 aa2.33□□□□□ -2.04
CCDC54-201ENST00000261058 GREB1Q4ZG55 1949 aa2.33□□□□□ -2.04
CCDC54-201ENST00000261058 TJP1Q07157 1748 aa2.33□□□□□ -2.04
CCDC54-201ENST00000261058 PKD1L3Q7Z443 1732 aa2.33□□□□□ -2.04
CCDC54-201ENST00000261058 TRPM6Q9BX84 2022 aa2.33□□□□□ -2.04
CCDC54-201ENST00000261058 SLIT2O94813 1529 aa2.33□□□□□ -2.04
CCDC54-201ENST00000261058 IGKV1OR2-108A0A075B7D4 117 aa2.33□□□□□ -2.04
CCDC54-201ENST00000261058 TRBV7-1A0A0A6YYK4 115 aa2.33□□□□□ -2.04
CCDC54-201ENST00000261058 TRAV1-2A0A0B4J238 106 aa2.33□□□□□ -2.04
CCDC54-201ENST00000261058 IQCF6A8MYZ5 107 aa2.33□□□□□ -2.04
CCDC54-201ENST00000261058 IGLV3-19P01714 112 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms