RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 TMEM238LA0A1B0GVL6 79 aa10.08□□□□□ -0.8
VHL-201ENST00000256474 A6NJY4 79 aa10.08□□□□□ -0.8
VHL-201ENST00000256474 IGHV4-4A0A075B6R2 117 aa10.08□□□□□ -0.8
VHL-201ENST00000256474 NBPF19A0A087WUL8 3843 aa10.08□□□□□ -0.8
VHL-201ENST00000256474 A0A0J9YXV3 536 aa10.08□□□□□ -0.8
VHL-201ENST00000256474 TSHBP01222 138 aa10.08□□□□□ -0.8
VHL-201ENST00000256474 PRB1P04280 392 aa10.08□□□□□ -0.8
VHL-201ENST00000256474 TSPEAR-AS2P59090 65 aa10.08□□□□□ -0.8
VHL-201ENST00000256474 GAGE12HA6NDE8 117 aa10.07□□□□□ -0.8
VHL-201ENST00000256474 SIGMAR1Q99720 223 aa10.07□□□□□ -0.8
VHL-201ENST00000256474 TRAV12-1A0A0B4J245 112 aa10.07□□□□□ -0.8
VHL-201ENST00000256474 CRYGDP07320 174 aa10.07□□□□□ -0.8
VHL-201ENST00000256474 DEFB131AP59861 70 aa10.07□□□□□ -0.8
VHL-201ENST00000256474 C18orf65Q6ZTR6 163 aa10.07□□□□□ -0.8
VHL-201ENST00000256474 SYT8Q8NBV8 401 aa10.07□□□□□ -0.8
VHL-201ENST00000256474 SPANXB1Q9NS25 103 aaPredicted RBP10.07□□□□□ -0.8
VHL-201ENST00000256474 CHD6Q8TD26 2715 aa10.06□□□□□ -0.8
VHL-201ENST00000256474 ZNRF2Q8NHG8 242 aa10.06□□□□□ -0.8
VHL-201ENST00000256474 IGHV4OR15-8A0A075B7B6 117 aa10.06□□□□□ -0.8
VHL-201ENST00000256474 A0A087WW49 117 aa10.06□□□□□ -0.8
VHL-201ENST00000256474 LINC01546A6NGU7 62 aa10.06□□□□□ -0.8
VHL-201ENST00000256474 RNF223E7ERA6 249 aa10.06□□□□□ -0.8
VHL-201ENST00000256474 MORN3Q6PF18 240 aaPredicted RBP10.06□□□□□ -0.8
VHL-201ENST00000256474 VCX2Q9H322 139 aa10.06□□□□□ -0.8
VHL-201ENST00000256474 A0A1B0GV72 72 aa10.05□□□□□ -0.8
VHL-201ENST00000256474 A0A1W2PRX2 142 aa10.05□□□□□ -0.8
VHL-201ENST00000256474 B4DSR2 109 aa10.05□□□□□ -0.8
VHL-201ENST00000256474 F8W1H4 67 aa10.05□□□□□ -0.8
VHL-201ENST00000256474 J3QQQ9 107 aa10.05□□□□□ -0.8
VHL-201ENST00000256474 PPP1R17O96001 155 aa10.05□□□□□ -0.8
VHL-201ENST00000256474 SLURP1P55000 103 aa10.05□□□□□ -0.8
VHL-201ENST00000256474 DCANP1Q8TF63 244 aa10.05□□□□□ -0.8
VHL-201ENST00000256474 Q9UF83 564 aa10.05□□□□□ -0.8
VHL-201ENST00000256474 A8MZ25 164 aa10.05□□□□□ -0.8
VHL-201ENST00000256474 TSPAN13O95857 204 aa10.05□□□□□ -0.8
VHL-201ENST00000256474 IGHV1OR15-1A0A075B7D0 117 aa10.04□□□□□ -0.8
VHL-201ENST00000256474 CD28P10747 220 aa10.04□□□□□ -0.8
VHL-201ENST00000256474 DLX4Q92988 240 aaPredicted RBP10.04□□□□□ -0.8
VHL-201ENST00000256474 TCTEX1D4Q5JR98 221 aa10.04□□□□□ -0.8
VHL-201ENST00000256474 IGLV4-69A0A075B6H9 119 aa10.03□□□□□ -0.8
VHL-201ENST00000256474 TRAV8-3A0A0A6YYJ7 113 aa10.03□□□□□ -0.8
VHL-201ENST00000256474 HOXD3P31249 432 aaPredicted RBP10.03□□□□□ -0.8
VHL-201ENST00000256474 LINC00315P59091 139 aa10.03□□□□□ -0.8
VHL-201ENST00000256474 CKS1BP61024 79 aa10.03□□□□□ -0.8
VHL-201ENST00000256474 TAL2Q16559 108 aa10.03□□□□□ -0.8
VHL-201ENST00000256474 APRG1Q8IVJ8 170 aa10.03□□□□□ -0.8
VHL-201ENST00000256474 C19orf54Q5BKX5 351 aa10.03□□□□□ -0.8
VHL-201ENST00000256474 A0A0J9YY99 117 aa10.02□□□□□ -0.81
VHL-201ENST00000256474 KLLNB2CW77 178 aa10.02□□□□□ -0.81
VHL-201ENST00000256474 ZNF625Q96I27 306 aaPredicted RBP10.02□□□□□ -0.81
VHL-201ENST00000256474 A0A0J9YX75 114 aa10.02□□□□□ -0.81
VHL-201ENST00000256474 POLR2KP53803 58 aaKnown RBP10.02□□□□□ -0.81
VHL-201ENST00000256474 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.02□□□□□ -0.81
VHL-201ENST00000256474 IGKV2-29A2NJV5 120 aaPredicted RBP10.02□□□□□ -0.81
VHL-201ENST00000256474 A4D1N5 150 aa10.02□□□□□ -0.81
VHL-201ENST00000256474 IGIPA6NJ69 53 aa10.02□□□□□ -0.81
VHL-201ENST00000256474 IGHV3-53P01767 116 aa10.02□□□□□ -0.81
VHL-201ENST00000256474 C3orf56Q8N813 242 aa10.02□□□□□ -0.81
VHL-201ENST00000256474 TNFRSF18Q9Y5U5 241 aa10.02□□□□□ -0.81
VHL-201ENST00000256474 KIF25-AS1Q9Y6Z4 181 aa10.02□□□□□ -0.81
VHL-201ENST00000256474 UBE2E2Q96LR5 201 aa10.01□□□□□ -0.81
VHL-201ENST00000256474 TRPT1Q86TN4 253 aaKnown RBP10.01□□□□□ -0.81
VHL-201ENST00000256474 IGLV1-40P01703 118 aa10□□□□□ -0.81
VHL-201ENST00000256474 DAND5Q8N907 189 aa10□□□□□ -0.81
VHL-201ENST00000256474 LINC01587Q99440 93 aa10□□□□□ -0.81
VHL-201ENST00000256474 C9JAW5 83 aa10□□□□□ -0.81
VHL-201ENST00000256474 M0QY20 66 aa10□□□□□ -0.81
VHL-201ENST00000256474 TCL1BO95988 128 aa10□□□□□ -0.81
VHL-201ENST00000256474 SS18L2Q9UHA2 77 aa10□□□□□ -0.81
VHL-201ENST00000256474 NDUFA11Q86Y39 141 aa9.99□□□□□ -0.81
VHL-201ENST00000256474 DYNLRB2Q8TF09 96 aa9.99□□□□□ -0.81
VHL-201ENST00000256474 CFC1BP0CG36 223 aa9.99□□□□□ -0.81
VHL-201ENST00000256474 CFC1P0CG37 223 aa9.99□□□□□ -0.81
VHL-201ENST00000256474 DGAT2L7PQ6IED9 249 aa9.99□□□□□ -0.81
VHL-201ENST00000256474 MUSTN1Q8IVN3 82 aa9.99□□□□□ -0.81
VHL-201ENST00000256474 XCL2Q9UBD3 114 aa9.99□□□□□ -0.81
VHL-201ENST00000256474 PSMB8P28062 276 aa9.98□□□□□ -0.81
VHL-201ENST00000256474 PAPPA-AS1Q5QFB9 102 aa9.98□□□□□ -0.81
VHL-201ENST00000256474 SPINK8P0C7L1 97 aa9.98□□□□□ -0.81
VHL-201ENST00000256474 TRAV26-1A0A087WT03 109 aa9.98□□□□□ -0.81
VHL-201ENST00000256474 IGKV3OR2-268A0A0C4DH90 116 aa9.98□□□□□ -0.81
VHL-201ENST00000256474 Q6ZSV7 163 aa9.98□□□□□ -0.81
VHL-201ENST00000256474 I3L3M4 83 aa9.97□□□□□ -0.81
VHL-201ENST00000256474 TMEM141Q96I45 108 aa9.97□□□□□ -0.81
VHL-201ENST00000256474 PRO1854Q9UHT4 67 aa9.97□□□□□ -0.81
VHL-201ENST00000256474 NFE4Q86UQ8 179 aa9.97□□□□□ -0.81
VHL-201ENST00000256474 FAM19A4Q96LR4 140 aa9.97□□□□□ -0.81
VHL-201ENST00000256474 H3BUA1 57 aa9.97□□□□□ -0.81
VHL-201ENST00000256474 K7EQG2 157 aa9.97□□□□□ -0.81
VHL-201ENST00000256474 COX6B1P14854 86 aa9.97□□□□□ -0.81
VHL-201ENST00000256474 RBMY1A1P0DJD3 496 aaKnown RBP9.96□□□□□ -0.81
VHL-201ENST00000256474 RBMY1CP0DJD4 496 aa9.96□□□□□ -0.81
VHL-201ENST00000256474 SMCPP49901 116 aaPredicted RBP9.96□□□□□ -0.81
VHL-201ENST00000256474 RBMY1FQ15415 496 aaKnown RBP9.96□□□□□ -0.81
VHL-201ENST00000256474 A8MWV9 139 aa9.96□□□□□ -0.81
VHL-201ENST00000256474 CRIP2P52943 208 aaPredicted RBP9.96□□□□□ -0.81
VHL-201ENST00000256474 FOXI1Q12951 378 aa9.96□□□□□ -0.81
VHL-201ENST00000256474 ERG28Q9UKR5 140 aa9.96□□□□□ -0.81
VHL-201ENST00000256474 TIMM21Q9BVV7 248 aa9.96□□□□□ -0.82
VHL-201ENST00000256474 MED14OSP0DP75 135 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms