RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 TSPAN13O95857 204 aa15.37■□□□□ 0.05
SNX3-201ENST00000230085 A0A0J9YY99 117 aa15.36■□□□□ 0.05
SNX3-201ENST00000230085 C11orf86A6NJI1 115 aa15.36■□□□□ 0.05
SNX3-201ENST00000230085 LINC00315P59091 139 aa15.36■□□□□ 0.05
SNX3-201ENST00000230085 Q6ZQT7 251 aa15.36■□□□□ 0.05
SNX3-201ENST00000230085 RPL39LQ96EH5 51 aaKnown RBP15.36■□□□□ 0.05
SNX3-201ENST00000230085 FBN1P35555 2871 aaKnown RBP15.36■□□□□ 0.05
SNX3-201ENST00000230085 ATRQ13535 2644 aa15.36■□□□□ 0.05
SNX3-201ENST00000230085 G3V318 75 aa15.36■□□□□ 0.05
SNX3-201ENST00000230085 POLR2KP53803 58 aaKnown RBP15.36■□□□□ 0.05
SNX3-201ENST00000230085 CDIP1Q9H305 208 aa15.36■□□□□ 0.05
SNX3-201ENST00000230085 H3BUA1 57 aa15.35■□□□□ 0.05
SNX3-201ENST00000230085 RNASE3P12724 160 aaKnown RBP15.35■□□□□ 0.05
SNX3-201ENST00000230085 NDUFA11Q86Y39 141 aa15.35■□□□□ 0.05
SNX3-201ENST00000230085 PPDPFLQ8WWR9 84 aa15.35■□□□□ 0.05
SNX3-201ENST00000230085 TRBV6-5A0A0K0K1A5 114 aa15.34■□□□□ 0.05
SNX3-201ENST00000230085 S100A4P26447 101 aaKnown RBP15.34■□□□□ 0.05
SNX3-201ENST00000230085 INSL3P51460 131 aa15.34■□□□□ 0.05
SNX3-201ENST00000230085 PMVKQ15126 192 aa15.34■□□□□ 0.05
SNX3-201ENST00000230085 ANXA2RQ3ZCQ2 193 aa15.34■□□□□ 0.05
SNX3-201ENST00000230085 TEN1Q86WV5 123 aa15.34■□□□□ 0.05
SNX3-201ENST00000230085 C14orf178Q8N769 122 aaPredicted RBP15.34■□□□□ 0.05
SNX3-201ENST00000230085 SLC25A29Q8N8R3 303 aa15.34■□□□□ 0.05
SNX3-201ENST00000230085 LINC01600Q96MT4 127 aa15.34■□□□□ 0.05
SNX3-201ENST00000230085 TSHBP01222 138 aa15.34■□□□□ 0.05
SNX3-201ENST00000230085 BLCAPP62952 87 aa15.34■□□□□ 0.05
SNX3-201ENST00000230085 SCGB1D4Q6XE38 83 aa15.34■□□□□ 0.05
SNX3-201ENST00000230085 PLEKHB2Q96CS7 222 aa15.34■□□□□ 0.05
SNX3-201ENST00000230085 TRAV41A0A0B4J266 112 aa15.32■□□□□ 0.04
SNX3-201ENST00000230085 CRYBA4P53673 196 aa15.32■□□□□ 0.04
SNX3-201ENST00000230085 SRSF9Q13242 221 aaKnown RBP eCLIP15.32■□□□□ 0.04
SNX3-201ENST00000230085 Q6ZS46 218 aa15.32■□□□□ 0.04
SNX3-201ENST00000230085 KLK15Q9H2R5 256 aa15.32■□□□□ 0.04
SNX3-201ENST00000230085 MOB4Q9Y3A3 225 aa15.32■□□□□ 0.04
SNX3-201ENST00000230085 IGHV3OR16-13A0A075B7E8 117 aa15.31■□□□□ 0.04
SNX3-201ENST00000230085 IGHV3-74A0A0B4J1X5 117 aa15.31■□□□□ 0.04
SNX3-201ENST00000230085 IGHV3-30P01768 117 aa15.31■□□□□ 0.04
SNX3-201ENST00000230085 IGHV3-30-5P0DP03 117 aa15.31■□□□□ 0.04
SNX3-201ENST00000230085 KRTAP24-1Q3LI83 254 aa15.31■□□□□ 0.04
SNX3-201ENST00000230085 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.31■□□□□ 0.04
SNX3-201ENST00000230085 LINC01548A6NM66 108 aa15.31■□□□□ 0.04
SNX3-201ENST00000230085 KLLNB2CW77 178 aa15.31■□□□□ 0.04
SNX3-201ENST00000230085 VCYO14598 125 aa15.31■□□□□ 0.04
SNX3-201ENST00000230085 IGF1P05019 195 aa15.31■□□□□ 0.04
SNX3-201ENST00000230085 ZFP2Q6ZN57 461 aa15.31■□□□□ 0.04
SNX3-201ENST00000230085 NFE4Q86UQ8 179 aa15.31■□□□□ 0.04
SNX3-201ENST00000230085 C10orf126Q8N4M7 172 aa15.31■□□□□ 0.04
SNX3-201ENST00000230085 TRBV27A0A0K0K1C4 114 aa15.3■□□□□ 0.04
SNX3-201ENST00000230085 DUSP14O95147 198 aaKnown RBP15.3■□□□□ 0.04
SNX3-201ENST00000230085 ARL3P36405 182 aa15.3■□□□□ 0.04
SNX3-201ENST00000230085 CKS1BP61024 79 aa15.3■□□□□ 0.04
SNX3-201ENST00000230085 ZNF876PQ49A33 203 aa15.3■□□□□ 0.04
SNX3-201ENST00000230085 USMG5Q96IX5 58 aa15.3■□□□□ 0.04
SNX3-201ENST00000230085 AMELXQ99217 191 aa15.3■□□□□ 0.04
SNX3-201ENST00000230085 IGHV3-49A0A0A0MS15 119 aa15.29■□□□□ 0.04
SNX3-201ENST00000230085 Q6ZSV7 163 aa15.29■□□□□ 0.04
SNX3-201ENST00000230085 SYT8Q8NBV8 401 aa15.29■□□□□ 0.04
SNX3-201ENST00000230085 LGALS9O00182 355 aa15.29■□□□□ 0.04
SNX3-201ENST00000230085 MGPP08493 103 aa15.27■□□□□ 0.04
SNX3-201ENST00000230085 ODF3Q96PU9 254 aa15.27■□□□□ 0.04
SNX3-201ENST00000230085 ZNF702PQ9H963 129 aa15.27■□□□□ 0.04
SNX3-201ENST00000230085 TP53TG1Q9Y2A0 90 aa15.27■□□□□ 0.04
SNX3-201ENST00000230085 KIR2DL4Q99706 377 aa15.26■□□□□ 0.03
SNX3-201ENST00000230085 A0A0J9YX75 114 aa15.26■□□□□ 0.03
SNX3-201ENST00000230085 CFC1BP0CG36 223 aa15.26■□□□□ 0.03
SNX3-201ENST00000230085 CFC1P0CG37 223 aa15.26■□□□□ 0.03
SNX3-201ENST00000230085 PSMB2P49721 201 aa15.26■□□□□ 0.03
SNX3-201ENST00000230085 RHOHQ15669 191 aa15.26■□□□□ 0.03
SNX3-201ENST00000230085 Q6ZUT4 128 aa15.26■□□□□ 0.03
SNX3-201ENST00000230085 CARD19Q96LW7 228 aa15.26■□□□□ 0.03
SNX3-201ENST00000230085 MUC4Q99102 2169 aa15.25■□□□□ 0.03
SNX3-201ENST00000230085 TMEM262E9PQX1 116 aa15.25■□□□□ 0.03
SNX3-201ENST00000230085 NSUN5P1Q3KNT7 163 aa15.25■□□□□ 0.03
SNX3-201ENST00000230085 PRO1854Q9UHT4 67 aa15.25■□□□□ 0.03
SNX3-201ENST00000230085 A8MWV9 139 aa15.24■□□□□ 0.03
SNX3-201ENST00000230085 NDUFA7O95182 113 aa15.24■□□□□ 0.03
SNX3-201ENST00000230085 TCL1BO95988 128 aa15.24■□□□□ 0.03
SNX3-201ENST00000230085 TMEM95Q3KNT9 176 aa15.24■□□□□ 0.03
SNX3-201ENST00000230085 UNQ9165/PRO28630Q6UXU0 137 aa15.24■□□□□ 0.03
SNX3-201ENST00000230085 Q8N2B8 174 aa15.24■□□□□ 0.03
SNX3-201ENST00000230085 KLHL30-AS1Q8NEE0 82 aa15.24■□□□□ 0.03
SNX3-201ENST00000230085 LINC01006Q8NI28 216 aa15.24■□□□□ 0.03
SNX3-201ENST00000230085 A0A0B4J2C4 111 aa15.24■□□□□ 0.03
SNX3-201ENST00000230085 LOC107984156A0A0G2JMH3 177 aa15.24■□□□□ 0.03
SNX3-201ENST00000230085 P0DMU3 169 aa15.24■□□□□ 0.03
SNX3-201ENST00000230085 FAM231AP0DMU4 169 aa15.24■□□□□ 0.03
SNX3-201ENST00000230085 FAM231CP0DMU5 169 aa15.24■□□□□ 0.03
SNX3-201ENST00000230085 RNASE4P34096 147 aaKnown RBP15.24■□□□□ 0.03
SNX3-201ENST00000230085 ARL17AQ8IVW1 177 aa15.24■□□□□ 0.03
SNX3-201ENST00000230085 GNRH2O43555 120 aa15.23■□□□□ 0.03
SNX3-201ENST00000230085 SPINK8P0C7L1 97 aa15.23■□□□□ 0.03
SNX3-201ENST00000230085 SUMO4Q6EEV6 95 aa15.23■□□□□ 0.03
SNX3-201ENST00000230085 C16orf95Q9H693 158 aa15.23■□□□□ 0.03
SNX3-201ENST00000230085 J3QQQ9 107 aa15.22■□□□□ 0.03
SNX3-201ENST00000230085 IGHG2P01859 326 aa15.22■□□□□ 0.03
SNX3-201ENST00000230085 FHL3Q13643 280 aa15.22■□□□□ 0.03
SNX3-201ENST00000230085 ZNF580Q9UK33 172 aa15.22■□□□□ 0.03
SNX3-201ENST00000230085 COL6A5A8TX70 2615 aa15.22■□□□□ 0.03
SNX3-201ENST00000230085 TMEM89A2RUT3 159 aa15.21■□□□□ 0.03
SNX3-201ENST00000230085 K7EMT4 169 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms